RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 IQGAP1P46940 1657 aa22.42■■□□□ 1.18
SRRM4-202ENST00000537597 PLEKHG1Q9ULL1 1385 aa22.41■■□□□ 1.18
SRRM4-202ENST00000537597 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
SRRM4-202ENST00000537597 NEXMIFQ5QGS0 1516 aa22.4■■□□□ 1.18
SRRM4-202ENST00000537597 KIF1BO60333 1816 aa22.39■■□□□ 1.17
SRRM4-202ENST00000537597 HDGFP51858 240 aaKnown RBP22.39■■□□□ 1.17
SRRM4-202ENST00000537597 CCDC144AA2RUR9 1427 aa22.39■■□□□ 1.17
SRRM4-202ENST00000537597 RPGRIP1LQ68CZ1 1315 aa22.38■■□□□ 1.17
SRRM4-202ENST00000537597 CHGAP10645 457 aaKnown RBP22.38■■□□□ 1.17
SRRM4-202ENST00000537597 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
SRRM4-202ENST00000537597 ADAMTS13Q76LX8 1427 aa22.37■■□□□ 1.17
SRRM4-202ENST00000537597 TBX22Q9Y458 520 aa22.35■■□□□ 1.17
SRRM4-202ENST00000537597 STRCP1A6NGW2 1772 aa22.32■■□□□ 1.16
SRRM4-202ENST00000537597 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
SRRM4-202ENST00000537597 SETBP1Q9Y6X0 1596 aa22.31■■□□□ 1.16
SRRM4-202ENST00000537597 CERKQ8TCT0 537 aa22.31■■□□□ 1.16
SRRM4-202ENST00000537597 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
SRRM4-202ENST00000537597 NUTM2DQ5VT03 806 aaPredicted RBP22.3■■□□□ 1.16
SRRM4-202ENST00000537597 SLC26A8Q96RN1 970 aa22.29■■□□□ 1.16
SRRM4-202ENST00000537597 PPLO60437 1756 aa22.29■■□□□ 1.16
SRRM4-202ENST00000537597 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
SRRM4-202ENST00000537597 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
SRRM4-202ENST00000537597 IFT172Q9UG01 1749 aa22.27■■□□□ 1.16
SRRM4-202ENST00000537597 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
SRRM4-202ENST00000537597 KCNA6P17658 529 aa22.26■■□□□ 1.15
SRRM4-202ENST00000537597 CPS1P31327 1500 aa22.26■■□□□ 1.15
SRRM4-202ENST00000537597 PIK3R4Q99570 1358 aa22.25■■□□□ 1.15
SRRM4-202ENST00000537597 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
SRRM4-202ENST00000537597 NRXN1Q9ULB1 1477 aa22.25■■□□□ 1.15
SRRM4-202ENST00000537597 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
SRRM4-202ENST00000537597 NWD1Q149M9 1564 aa22.24■■□□□ 1.15
SRRM4-202ENST00000537597 CHD2O14647 1828 aaKnown RBP22.23■■□□□ 1.15
SRRM4-202ENST00000537597 RGL3Q3MIN7 710 aa22.23■■□□□ 1.15
SRRM4-202ENST00000537597 ADGRF5Q8IZF2 1346 aa22.23■■□□□ 1.15
SRRM4-202ENST00000537597 LRRC7Q96NW7 1537 aa22.22■■□□□ 1.15
SRRM4-202ENST00000537597 PTPRUQ92729 1446 aa22.22■■□□□ 1.15
SRRM4-202ENST00000537597 SETD1AO15047 1707 aaKnown RBP22.21■■□□□ 1.15
SRRM4-202ENST00000537597 METP08581 1390 aa22.19■■□□□ 1.14
SRRM4-202ENST00000537597 MYOM2P54296 1465 aa22.19■■□□□ 1.14
SRRM4-202ENST00000537597 PIK3C2GO75747 1445 aa22.18■■□□□ 1.14
SRRM4-202ENST00000537597 STAC3Q96MF2 364 aa22.18■■□□□ 1.14
SRRM4-202ENST00000537597 ALKQ9UM73 1620 aa22.17■■□□□ 1.14
SRRM4-202ENST00000537597 PRAG1Q86YV5 1406 aa22.16■■□□□ 1.14
SRRM4-202ENST00000537597 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
SRRM4-202ENST00000537597 XIRP1Q702N8 1843 aaKnown RBP22.15■■□□□ 1.14
SRRM4-202ENST00000537597 NKTRP30414 1462 aaKnown RBP22.15■■□□□ 1.14
SRRM4-202ENST00000537597 C14orf93Q9H972 538 aaKnown RBP22.14■■□□□ 1.13
SRRM4-202ENST00000537597 FBXO41Q8TF61 875 aa22.13■■□□□ 1.13
SRRM4-202ENST00000537597 SIN3AQ96ST3 1273 aa22.13■■□□□ 1.13
SRRM4-202ENST00000537597 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
SRRM4-202ENST00000537597 XRN1Q8IZH2 1706 aaKnown RBP22.12■■□□□ 1.13
SRRM4-202ENST00000537597 BCANQ96GW7 911 aa22.12■■□□□ 1.13
SRRM4-202ENST00000537597 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
SRRM4-202ENST00000537597 NCOA3Q9Y6Q9 1424 aa22.11■■□□□ 1.13
SRRM4-202ENST00000537597 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
SRRM4-202ENST00000537597 TMEM94Q12767 1356 aa22.09■■□□□ 1.13
SRRM4-202ENST00000537597 DCAF11Q8TEB1 546 aa22.08■■□□□ 1.13
SRRM4-202ENST00000537597 PROSER2Q86WR7 435 aaPredicted RBP22.06■■□□□ 1.12
SRRM4-202ENST00000537597 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
SRRM4-202ENST00000537597 ILDR1Q86SU0 546 aaPredicted RBP22.05■■□□□ 1.12
SRRM4-202ENST00000537597 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
SRRM4-202ENST00000537597 TECPR2O15040 1411 aa22.05■■□□□ 1.12
SRRM4-202ENST00000537597 ABCC11Q96J66 1382 aa22.04■■□□□ 1.12
SRRM4-202ENST00000537597 ADGRB1O14514 1584 aa22.03■■□□□ 1.12
SRRM4-202ENST00000537597 LRPPRCP42704 1394 aaKnown RBP22.02■■□□□ 1.12
SRRM4-202ENST00000537597 SIRT1Q96EB6 747 aa22.02■■□□□ 1.12
SRRM4-202ENST00000537597 PTCH1Q13635 1447 aa22.02■■□□□ 1.12
SRRM4-202ENST00000537597 ROBO2Q9HCK4 1378 aa22.01■■□□□ 1.11
SRRM4-202ENST00000537597 RBM33Q96EV2 1170 aaKnown RBP22.01■■□□□ 1.11
SRRM4-202ENST00000537597 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
SRRM4-202ENST00000537597 KDM2AQ9Y2K7 1162 aa22■■□□□ 1.11
SRRM4-202ENST00000537597 LAMC1P11047 1609 aa21.98■■□□□ 1.11
SRRM4-202ENST00000537597 CLSPNQ9HAW4 1339 aa21.98■■□□□ 1.11
SRRM4-202ENST00000537597 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
SRRM4-202ENST00000537597 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
SRRM4-202ENST00000537597 C19orf44Q9H6X5 657 aa21.96■■□□□ 1.11
SRRM4-202ENST00000537597 TOM1O60784 492 aa21.95■■□□□ 1.1
SRRM4-202ENST00000537597 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
SRRM4-202ENST00000537597 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
SRRM4-202ENST00000537597 UBAP1LF5GYI3 381 aa21.94■■□□□ 1.1
SRRM4-202ENST00000537597 FAM135BQ49AJ0 1406 aa21.93■■□□□ 1.1
SRRM4-202ENST00000537597 DLC1Q96QB1 1528 aa21.91■■□□□ 1.1
SRRM4-202ENST00000537597 DCCP43146 1447 aa21.91■■□□□ 1.1
SRRM4-202ENST00000537597 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.91■■□□□ 1.1
SRRM4-202ENST00000537597 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
SRRM4-202ENST00000537597 NBPF1Q3BBV0 1214 aa21.9■■□□□ 1.1
SRRM4-202ENST00000537597 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
SRRM4-202ENST00000537597 MSH6P52701 1360 aa21.89■■□□□ 1.1
SRRM4-202ENST00000537597 PLEKHH1Q9ULM0 1364 aa21.89■■□□□ 1.1
SRRM4-202ENST00000537597 WAPLQ7Z5K2 1190 aa21.88■■□□□ 1.09
SRRM4-202ENST00000537597 STK26Q9P289 416 aa21.87■■□□□ 1.09
SRRM4-202ENST00000537597 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
SRRM4-202ENST00000537597 SLAIN2Q9P270 581 aa21.86■■□□□ 1.09
SRRM4-202ENST00000537597 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
SRRM4-202ENST00000537597 CADPS2Q86UW7 1296 aa21.85■■□□□ 1.09
SRRM4-202ENST00000537597 MST1RQ04912 1400 aa21.83■■□□□ 1.09
SRRM4-202ENST00000537597 GPRASP1Q5JY77 1395 aa21.83■■□□□ 1.08
SRRM4-202ENST00000537597 TRPM1Q7Z4N2 1603 aa21.83■■□□□ 1.08
SRRM4-202ENST00000537597 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
SRRM4-202ENST00000537597 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms