RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 ATP2B3Q16720 1220 aa10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 DHX37Q8IY37 1157 aaKnown RBP10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 TNPO1Q92973 898 aaKnown RBP10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 KCNJ4P48050 445 aa10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 TSPYL1Q9H0U9 437 aa10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 BCCIPQ9P287 314 aaKnown RBP eCLIP10.62□□□□□ -0.71
SRGAP1-202ENST00000537556 NINLQ9Y2I6 1382 aa10.61□□□□□ -0.71
SRGAP1-202ENST00000537556 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
SRGAP1-202ENST00000537556 FEZ1Q99689 392 aa10.61□□□□□ -0.71
SRGAP1-202ENST00000537556 PANK3Q9H999 370 aa10.61□□□□□ -0.71
SRGAP1-202ENST00000537556 CUX1P39880 1505 aa10.61□□□□□ -0.71
SRGAP1-202ENST00000537556 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 ZNF692Q9BU19 519 aaPredicted RBP10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 KIF3AQ9Y496 699 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 PTPRKQ15262 1439 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 ZNF445P59923 1031 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 GABPB1Q06547 395 aaPredicted RBP10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
SRGAP1-202ENST00000537556 TIGD1Q96MW7 591 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 RPRD2Q5VT52 1461 aaKnown RBP10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 USP47Q96K76 1375 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 E9PSI1 815 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 MPHOSPH9Q99550 1183 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 DDIT3P35638 169 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 RAB3GAP1Q15042 981 aa10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 DDX49Q9Y6V7 483 aaKnown RBP10.59□□□□□ -0.71
SRGAP1-202ENST00000537556 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 DNAJC5Q9H3Z4 198 aa10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 CLGNO14967 610 aa10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 IGHDP01880 384 aa10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 NCOA3Q9Y6Q9 1424 aa10.58□□□□□ -0.72
SRGAP1-202ENST00000537556 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
SRGAP1-202ENST00000537556 SMC5Q8IY18 1101 aa10.57□□□□□ -0.72
SRGAP1-202ENST00000537556 ATP1B4Q9UN42 357 aaPredicted RBP10.57□□□□□ -0.72
SRGAP1-202ENST00000537556 DENND4BO75064 1496 aaPredicted RBP10.57□□□□□ -0.72
SRGAP1-202ENST00000537556 TEX14Q8IWB6 1497 aa10.57□□□□□ -0.72
SRGAP1-202ENST00000537556 MMP14P50281 582 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 OGFRQ9NZT2 677 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 CTTNBP2Q8WZ74 1663 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 BIVM-ERCC5R4GMW8 1640 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 YY1AP1Q9H869 796 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 CALCOCO1Q9P1Z2 691 aa10.56□□□□□ -0.72
SRGAP1-202ENST00000537556 BCORL1Q5H9F3 1711 aa10.55□□□□□ -0.72
SRGAP1-202ENST00000537556 IGSF3O75054 1194 aa10.55□□□□□ -0.72
SRGAP1-202ENST00000537556 PMFBP1Q8TBY8 1022 aa10.55□□□□□ -0.72
SRGAP1-202ENST00000537556 SNX21Q969T3 373 aa10.55□□□□□ -0.72
SRGAP1-202ENST00000537556 PARD3Q8TEW0 1356 aa10.54□□□□□ -0.72
SRGAP1-202ENST00000537556 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
SRGAP1-202ENST00000537556 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
SRGAP1-202ENST00000537556 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
SRGAP1-202ENST00000537556 PTMAP06454 111 aaKnown RBP10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 GOLGA2Q08379 1002 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 GEMIN8Q9NWZ8 242 aaKnown RBP10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 PCF11O94913 1555 aaKnown RBP10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 CLEC17AQ6ZS10 378 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 BCL2L12Q9HB09 334 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 HDAC5Q9UQL6 1122 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 FYCO1Q9BQS8 1478 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 TULP2O00295 520 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 APPP05067 770 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
SRGAP1-202ENST00000537556 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
SRGAP1-202ENST00000537556 RBSNQ9H1K0 784 aa10.52□□□□□ -0.73
SRGAP1-202ENST00000537556 URB2Q14146 1524 aaKnown RBP10.52□□□□□ -0.73
SRGAP1-202ENST00000537556 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 U2AF2P26368 475 aaKnown RBP eCLIP10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 FAM193AP78312 1265 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 CHAF1AQ13111 956 aaPredicted RBP10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 ZSCAN23Q3MJ62 389 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 DIAPH3Q9NSV4 1193 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 MFAP1P55081 439 aaKnown RBP10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 TSC1Q92574 1164 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 RRP7BPQ9NSQ0 103 aa10.51□□□□□ -0.73
SRGAP1-202ENST00000537556 CERS3Q8IU89 383 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 PIBF1Q8WXW3 757 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 ANKRD7Q92527 254 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 ZNF622Q969S3 477 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 KIAA1107Q9UPP5 1409 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 SLFN14P0C7P3 912 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 NOLC1Q14978 699 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
SRGAP1-202ENST00000537556 KDM5CP41229 1560 aa10.49□□□□□ -0.73
SRGAP1-202ENST00000537556 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
SRGAP1-202ENST00000537556 ANKRD30AQ9BXX3 1397 aa10.49□□□□□ -0.73
SRGAP1-202ENST00000537556 ARHGAP31Q2M1Z3 1444 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms