RNA–Protein interactions for RNA: ENST00000537540.1

SPRYD3-202, Transcript of SPRY domain containing 3, humanhuman

TSL 2

Gene SPRYD3, Length 927 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRYD3-202ENST00000537540 NUP155O75694 1391 aa26.23■■□□□ 1.79
SPRYD3-202ENST00000537540 ZFYVE9O95405 1425 aa26.17■■□□□ 1.78
SPRYD3-202ENST00000537540 SLC26A8Q96RN1 970 aa26.16■■□□□ 1.78
SPRYD3-202ENST00000537540 RIMS2Q9UQ26 1411 aa26.15■■□□□ 1.78
SPRYD3-202ENST00000537540 SPHKAPQ2M3C7 1700 aa26.15■■□□□ 1.78
SPRYD3-202ENST00000537540 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
SPRYD3-202ENST00000537540 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
SPRYD3-202ENST00000537540 BCANQ96GW7 911 aa26.13■■□□□ 1.77
SPRYD3-202ENST00000537540 NAIPQ13075 1403 aa26.11■■□□□ 1.77
SPRYD3-202ENST00000537540 PLEKHG1Q9ULL1 1385 aa26.1■■□□□ 1.77
SPRYD3-202ENST00000537540 NWD1Q149M9 1564 aa26.1■■□□□ 1.77
SPRYD3-202ENST00000537540 PPP1R15AO75807 674 aaPredicted RBP26.09■■□□□ 1.77
SPRYD3-202ENST00000537540 KCNA6P17658 529 aa26.09■■□□□ 1.77
SPRYD3-202ENST00000537540 CHD2O14647 1828 aaKnown RBP26.08■■□□□ 1.77
SPRYD3-202ENST00000537540 HDGFP51858 240 aaKnown RBP26.07■■□□□ 1.76
SPRYD3-202ENST00000537540 MED1Q15648 1581 aaPredicted RBP26.06■■□□□ 1.76
SPRYD3-202ENST00000537540 NUTM2DQ5VT03 806 aaPredicted RBP26.05■■□□□ 1.76
SPRYD3-202ENST00000537540 TMEM94Q12767 1356 aa26.05■■□□□ 1.76
SPRYD3-202ENST00000537540 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.04■■□□□ 1.76
SPRYD3-202ENST00000537540 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
SPRYD3-202ENST00000537540 PROSER2Q86WR7 435 aaPredicted RBP26.02■■□□□ 1.76
SPRYD3-202ENST00000537540 RBM33Q96EV2 1170 aaKnown RBP26.02■■□□□ 1.76
SPRYD3-202ENST00000537540 HFM1A2PYH4 1435 aa26.01■■□□□ 1.75
SPRYD3-202ENST00000537540 CLTCL1P53675 1640 aa26■■□□□ 1.75
SPRYD3-202ENST00000537540 ADAMTS13Q76LX8 1427 aa25.98■■□□□ 1.75
SPRYD3-202ENST00000537540 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
SPRYD3-202ENST00000537540 DIP2AQ14689 1571 aa25.98■■□□□ 1.75
SPRYD3-202ENST00000537540 TRPM2O94759 1503 aa25.97■■□□□ 1.75
SPRYD3-202ENST00000537540 KIF1BO60333 1816 aa25.97■■□□□ 1.75
SPRYD3-202ENST00000537540 TBX22Q9Y458 520 aa25.96■■□□□ 1.75
SPRYD3-202ENST00000537540 TRIM52Q96A61 297 aa25.95■■□□□ 1.74
SPRYD3-202ENST00000537540 FAM135BQ49AJ0 1406 aa25.95■■□□□ 1.74
SPRYD3-202ENST00000537540 NRXN3Q9Y4C0 1643 aa25.92■■□□□ 1.74
SPRYD3-202ENST00000537540 ZNF326Q5BKZ1 582 aaKnown RBP25.92■■□□□ 1.74
SPRYD3-202ENST00000537540 ROBO1Q9Y6N7 1651 aa25.92■■□□□ 1.74
SPRYD3-202ENST00000537540 MSH6P52701 1360 aa25.9■■□□□ 1.74
SPRYD3-202ENST00000537540 SETBP1Q9Y6X0 1596 aa25.88■■□□□ 1.73
SPRYD3-202ENST00000537540 PIK3R4Q99570 1358 aa25.88■■□□□ 1.73
SPRYD3-202ENST00000537540 NEXMIFQ5QGS0 1516 aa25.88■■□□□ 1.73
SPRYD3-202ENST00000537540 SLC4A1APQ9BWU0 796 aaKnown RBP25.86■■□□□ 1.73
SPRYD3-202ENST00000537540 PTPRUQ92729 1446 aa25.85■■□□□ 1.73
SPRYD3-202ENST00000537540 SLAIN2Q9P270 581 aa25.83■■□□□ 1.73
SPRYD3-202ENST00000537540 XRN1Q8IZH2 1706 aaKnown RBP25.83■■□□□ 1.72
SPRYD3-202ENST00000537540 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.83■■□□□ 1.72
SPRYD3-202ENST00000537540 RGS17Q9UGC6 210 aaPredicted RBP25.82■■□□□ 1.72
SPRYD3-202ENST00000537540 NCOA3Q9Y6Q9 1424 aa25.81■■□□□ 1.72
SPRYD3-202ENST00000537540 C14orf37Q86TY3 774 aa25.81■■□□□ 1.72
SPRYD3-202ENST00000537540 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
SPRYD3-202ENST00000537540 PHLPP1O60346 1717 aa25.77■■□□□ 1.72
SPRYD3-202ENST00000537540 PPLO60437 1756 aa25.77■■□□□ 1.72
SPRYD3-202ENST00000537540 FOXD1Q16676 465 aa25.76■■□□□ 1.71
SPRYD3-202ENST00000537540 METP08581 1390 aa25.76■■□□□ 1.71
SPRYD3-202ENST00000537540 SETD1AO15047 1707 aaKnown RBP25.74■■□□□ 1.71
SPRYD3-202ENST00000537540 C19orf44Q9H6X5 657 aa25.72■■□□□ 1.71
SPRYD3-202ENST00000537540 ATF3P18847 181 aa25.7■■□□□ 1.7
SPRYD3-202ENST00000537540 CADPS2Q86UW7 1296 aa25.7■■□□□ 1.7
SPRYD3-202ENST00000537540 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
SPRYD3-202ENST00000537540 VGFO15240 615 aaPredicted RBP25.68■■□□□ 1.7
SPRYD3-202ENST00000537540 RPGRIP1LQ68CZ1 1315 aa25.67■■□□□ 1.7
SPRYD3-202ENST00000537540 COL16A1Q07092 1604 aaPredicted RBP25.66■■□□□ 1.7
SPRYD3-202ENST00000537540 NALCNQ8IZF0 1738 aa25.66■■□□□ 1.7
SPRYD3-202ENST00000537540 CCDC144AA2RUR9 1427 aa25.66■■□□□ 1.7
SPRYD3-202ENST00000537540 POTEAQ6S8J7 498 aa25.66■■□□□ 1.7
SPRYD3-202ENST00000537540 DCCP43146 1447 aa25.64■■□□□ 1.7
SPRYD3-202ENST00000537540 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.7
SPRYD3-202ENST00000537540 IFT172Q9UG01 1749 aa25.64■■□□□ 1.7
SPRYD3-202ENST00000537540 JCADQ9P266 1359 aa25.64■■□□□ 1.69
SPRYD3-202ENST00000537540 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
SPRYD3-202ENST00000537540 ADGRL3Q9HAR2 1447 aa25.61■■□□□ 1.69
SPRYD3-202ENST00000537540 SPATA31E1Q6ZUB1 1445 aa25.6■■□□□ 1.69
SPRYD3-202ENST00000537540 RGL3Q3MIN7 710 aa25.59■■□□□ 1.69
SPRYD3-202ENST00000537540 MST1RQ04912 1400 aa25.58■■□□□ 1.69
SPRYD3-202ENST00000537540 PTCH1Q13635 1447 aa25.58■■□□□ 1.69
SPRYD3-202ENST00000537540 BRINP3Q76B58 766 aa25.58■■□□□ 1.69
SPRYD3-202ENST00000537540 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
SPRYD3-202ENST00000537540 ASXL1Q8IXJ9 1541 aa25.56■■□□□ 1.68
SPRYD3-202ENST00000537540 ROBO2Q9HCK4 1378 aa25.56■■□□□ 1.68
SPRYD3-202ENST00000537540 ADGRF5Q8IZF2 1346 aa25.55■■□□□ 1.68
SPRYD3-202ENST00000537540 ACIN1Q9UKV3 1341 aaKnown RBP25.55■■□□□ 1.68
SPRYD3-202ENST00000537540 NHSL1Q5SYE7 1610 aa25.54■■□□□ 1.68
SPRYD3-202ENST00000537540 SHPRHQ149N8 1683 aa25.54■■□□□ 1.68
SPRYD3-202ENST00000537540 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
SPRYD3-202ENST00000537540 SPATA31A6Q5VVP1 1343 aa25.52■■□□□ 1.68
SPRYD3-202ENST00000537540 ANKRD30BQ9BXX2 1392 aa25.51■■□□□ 1.67
SPRYD3-202ENST00000537540 LRP6O75581 1613 aa25.48■■□□□ 1.67
SPRYD3-202ENST00000537540 MEX3CQ5U5Q3 659 aaKnown RBP25.47■■□□□ 1.67
SPRYD3-202ENST00000537540 C1orf167Q5SNV9 1468 aa25.46■■□□□ 1.67
SPRYD3-202ENST00000537540 PIK3C2GO75747 1445 aa25.46■■□□□ 1.67
SPRYD3-202ENST00000537540 KNDC1Q76NI1 1749 aa25.45■■□□□ 1.66
SPRYD3-202ENST00000537540 DDX17Q92841 729 aaKnown RBP25.43■■□□□ 1.66
SPRYD3-202ENST00000537540 STK26Q9P289 416 aa25.42■■□□□ 1.66
SPRYD3-202ENST00000537540 ZNF772Q68DY9 489 aaPredicted RBP25.41■■□□□ 1.66
SPRYD3-202ENST00000537540 TECPR2O15040 1411 aa25.4■■□□□ 1.66
SPRYD3-202ENST00000537540 NUTM2BA6NNL0 878 aaPredicted RBP25.4■■□□□ 1.66
SPRYD3-202ENST00000537540 NUTM2EB1AL46 878 aaPredicted RBP25.4■■□□□ 1.66
SPRYD3-202ENST00000537540 TMEM132EQ6IEE7 984 aa25.4■■□□□ 1.66
SPRYD3-202ENST00000537540 NUTM2AQ8IVF1 878 aaPredicted RBP25.4■■□□□ 1.66
SPRYD3-202ENST00000537540 LRPPRCP42704 1394 aaKnown RBP25.4■■□□□ 1.66
SPRYD3-202ENST00000537540 CDC42BPGQ6DT37 1551 aa25.39■■□□□ 1.66
SPRYD3-202ENST00000537540 LAMC1P11047 1609 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms