RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RICTORQ6R327 1708 aa21.23■□□□□ 0.99
MKS1-204ENST00000537529 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
MKS1-204ENST00000537529 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
MKS1-204ENST00000537529 NRXN1Q9ULB1 1477 aa21.21■□□□□ 0.99
MKS1-204ENST00000537529 NLRP13Q86W25 1043 aa21.21■□□□□ 0.99
MKS1-204ENST00000537529 LRPPRCP42704 1394 aaKnown RBP21.21■□□□□ 0.99
MKS1-204ENST00000537529 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.99
MKS1-204ENST00000537529 RIMBP3CA6NJZ7 1639 aa21.2■□□□□ 0.98
MKS1-204ENST00000537529 RIMBP3BA6NNM3 1639 aa21.2■□□□□ 0.98
MKS1-204ENST00000537529 CAMSAP1Q5T5Y3 1602 aa21.2■□□□□ 0.98
MKS1-204ENST00000537529 RIMBP3Q9UFD9 1639 aa21.2■□□□□ 0.98
MKS1-204ENST00000537529 PANK3Q9H999 370 aa21.2■□□□□ 0.98
MKS1-204ENST00000537529 ADGRF5Q8IZF2 1346 aa21.19■□□□□ 0.98
MKS1-204ENST00000537529 SYNMO15061 1565 aa21.18■□□□□ 0.98
MKS1-204ENST00000537529 ZC3H13Q5T200 1668 aaKnown RBP21.16■□□□□ 0.98
MKS1-204ENST00000537529 SLC24A1O60721 1099 aa21.16■□□□□ 0.98
MKS1-204ENST00000537529 SMG6Q86US8 1419 aaKnown RBP21.16■□□□□ 0.98
MKS1-204ENST00000537529 CFAP70Q5T0N1 1121 aa21.16■□□□□ 0.98
MKS1-204ENST00000537529 NOS1P29475 1434 aa21.16■□□□□ 0.98
MKS1-204ENST00000537529 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.98
MKS1-204ENST00000537529 CHGAP10645 457 aaKnown RBP21.14■□□□□ 0.97
MKS1-204ENST00000537529 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.97
MKS1-204ENST00000537529 RPGRIP1LQ68CZ1 1315 aa21.13■□□□□ 0.97
MKS1-204ENST00000537529 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
MKS1-204ENST00000537529 DIP2BQ9P265 1576 aa21.13■□□□□ 0.97
MKS1-204ENST00000537529 CC2D1BQ5T0F9 858 aaKnown RBP21.13■□□□□ 0.97
MKS1-204ENST00000537529 ZMYM4Q5VZL5 1548 aa21.12■□□□□ 0.97
MKS1-204ENST00000537529 PPLO60437 1756 aa21.12■□□□□ 0.97
MKS1-204ENST00000537529 YEATS2Q9ULM3 1422 aa21.12■□□□□ 0.97
MKS1-204ENST00000537529 KDM5AP29375 1690 aaKnown RBP21.11■□□□□ 0.97
MKS1-204ENST00000537529 MYO3AQ8NEV4 1616 aa21.11■□□□□ 0.97
MKS1-204ENST00000537529 PIK3C2BO00750 1634 aa21.1■□□□□ 0.97
MKS1-204ENST00000537529 PIK3C2GO75747 1445 aa21.1■□□□□ 0.97
MKS1-204ENST00000537529 NUDCQ9Y266 331 aa21.09■□□□□ 0.97
MKS1-204ENST00000537529 KNSTRNQ9Y448 316 aa21.09■□□□□ 0.97
MKS1-204ENST00000537529 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
MKS1-204ENST00000537529 MYOM1P52179 1685 aa21.08■□□□□ 0.97
MKS1-204ENST00000537529 FAM69CQ0P6D2 419 aa21.08■□□□□ 0.97
MKS1-204ENST00000537529 INSRP06213 1382 aa21.08■□□□□ 0.96
MKS1-204ENST00000537529 SBNO2Q9Y2G9 1366 aa21.07■□□□□ 0.96
MKS1-204ENST00000537529 ERVK-7P63135 1459 aa21.07■□□□□ 0.96
MKS1-204ENST00000537529 IRX6P78412 446 aaPredicted RBP21.06■□□□□ 0.96
MKS1-204ENST00000537529 ASXL1Q8IXJ9 1541 aa21.06■□□□□ 0.96
MKS1-204ENST00000537529 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
MKS1-204ENST00000537529 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
MKS1-204ENST00000537529 NPC1L1Q9UHC9 1359 aa21.03■□□□□ 0.96
MKS1-204ENST00000537529 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
MKS1-204ENST00000537529 ADGRB1O14514 1584 aa21.02■□□□□ 0.96
MKS1-204ENST00000537529 AMER1Q5JTC6 1135 aaPredicted RBP21.01■□□□□ 0.95
MKS1-204ENST00000537529 CENPJQ9HC77 1338 aaPredicted RBP21.01■□□□□ 0.95
MKS1-204ENST00000537529 NEXMIFQ5QGS0 1516 aa21.01■□□□□ 0.95
MKS1-204ENST00000537529 BLMP54132 1417 aaPredicted RBP21■□□□□ 0.95
MKS1-204ENST00000537529 SLC52A1Q9NWF4 448 aa21■□□□□ 0.95
MKS1-204ENST00000537529 PPP4R2Q9NY27 417 aa21■□□□□ 0.95
MKS1-204ENST00000537529 REREQ9P2R6 1566 aa21■□□□□ 0.95
MKS1-204ENST00000537529 VGFO15240 615 aaPredicted RBP20.99■□□□□ 0.95
MKS1-204ENST00000537529 PREX1Q8TCU6 1659 aa20.98■□□□□ 0.95
MKS1-204ENST00000537529 PPP2R1AP30153 589 aa20.97■□□□□ 0.95
MKS1-204ENST00000537529 QRICH2Q9H0J4 1663 aa20.96■□□□□ 0.95
MKS1-204ENST00000537529 AGLP35573 1532 aa20.95■□□□□ 0.95
MKS1-204ENST00000537529 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.95
MKS1-204ENST00000537529 TSPOAP1O95153 1857 aa20.95■□□□□ 0.94
MKS1-204ENST00000537529 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
MKS1-204ENST00000537529 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
MKS1-204ENST00000537529 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.94
MKS1-204ENST00000537529 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
MKS1-204ENST00000537529 IDI1Q13907 227 aa20.94■□□□□ 0.94
MKS1-204ENST00000537529 PPP6R1Q9UPN7 881 aa20.92■□□□□ 0.94
MKS1-204ENST00000537529 TMEM132EQ6IEE7 984 aa20.91■□□□□ 0.94
MKS1-204ENST00000537529 TMEM131LA2VDJ0 1609 aa20.91■□□□□ 0.94
MKS1-204ENST00000537529 WDR43Q15061 677 aaKnown RBP eCLIP20.89■□□□□ 0.93
MKS1-204ENST00000537529 ARHGEF28Q8N1W1 1705 aaKnown RBP20.88■□□□□ 0.93
MKS1-204ENST00000537529 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
MKS1-204ENST00000537529 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
MKS1-204ENST00000537529 PUS7Q96PZ0 661 aaKnown RBP20.85■□□□□ 0.93
MKS1-204ENST00000537529 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
MKS1-204ENST00000537529 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
MKS1-204ENST00000537529 ARHGEF40Q8TER5 1519 aa20.85■□□□□ 0.93
MKS1-204ENST00000537529 MYO5BQ9ULV0 1848 aa20.84■□□□□ 0.93
MKS1-204ENST00000537529 EVC2Q86UK5 1308 aa20.83■□□□□ 0.93
MKS1-204ENST00000537529 FBXO31Q5XUX0 539 aaPredicted RBP20.82■□□□□ 0.92
MKS1-204ENST00000537529 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
MKS1-204ENST00000537529 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
MKS1-204ENST00000537529 TULP4Q9NRJ4 1543 aa20.81■□□□□ 0.92
MKS1-204ENST00000537529 USP32Q8NFA0 1604 aa20.81■□□□□ 0.92
MKS1-204ENST00000537529 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
MKS1-204ENST00000537529 KIF13AQ9H1H9 1805 aa20.8■□□□□ 0.92
MKS1-204ENST00000537529 SPATA31D1Q6ZQQ2 1576 aa20.8■□□□□ 0.92
MKS1-204ENST00000537529 B4GALNT3Q6L9W6 998 aa20.79■□□□□ 0.92
MKS1-204ENST00000537529 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
MKS1-204ENST00000537529 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
MKS1-204ENST00000537529 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
MKS1-204ENST00000537529 CDCA7LQ96GN5 454 aa20.76■□□□□ 0.91
MKS1-204ENST00000537529 PTPRMP28827 1452 aa20.75■□□□□ 0.91
MKS1-204ENST00000537529 ANKRD36BQ8N2N9 1353 aa20.75■□□□□ 0.91
MKS1-204ENST00000537529 NINLQ9Y2I6 1382 aa20.75■□□□□ 0.91
MKS1-204ENST00000537529 YTHDC2Q9H6S0 1430 aaKnown RBP20.74■□□□□ 0.91
MKS1-204ENST00000537529 POLR3AO14802 1390 aaPredicted RBP20.74■□□□□ 0.91
MKS1-204ENST00000537529 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
MKS1-204ENST00000537529 ALKQ9UM73 1620 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms