RNA–Protein interactions for RNA: ENST00000536908.6

EFCAB5-208, Transcript of EF-hand calcium binding domain 5, human

TSL 2 BASIC

Gene EFCAB5, Length 2,826 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB5-208	ENST00000536908	RIMS2	Q9UQ26	1411 aa		14.12	□□□□□ -0.15
EFCAB5-208	ENST00000536908	CHD2	O14647	1828 aa	Known RBP	14.12	□□□□□ -0.15
EFCAB5-208	ENST00000536908	NCOA3	Q9Y6Q9	1424 aa		14.11	□□□□□ -0.15
EFCAB5-208	ENST00000536908	STRCP1	A6NGW2	1772 aa		14.11	□□□□□ -0.15
EFCAB5-208	ENST00000536908	ITGAE	P38570	1179 aa		14.1	□□□□□ -0.15
EFCAB5-208	ENST00000536908	PPARGC1B	Q86YN6	1023 aa	Known RBP	14.1	□□□□□ -0.15
EFCAB5-208	ENST00000536908	STAG3	Q9UJ98	1225 aa		14.1	□□□□□ -0.15
EFCAB5-208	ENST00000536908	TXNDC2	Q86VQ3	553 aa		14.1	□□□□□ -0.15
EFCAB5-208	ENST00000536908	RPGRIP1L	Q68CZ1	1315 aa		14.09	□□□□□ -0.15
EFCAB5-208	ENST00000536908	PPL	O60437	1756 aa		14.08	□□□□□ -0.16
EFCAB5-208	ENST00000536908	NEXMIF	Q5QGS0	1516 aa		14.08	□□□□□ -0.16
EFCAB5-208	ENST00000536908	IFT172	Q9UG01	1749 aa		14.08	□□□□□ -0.16
EFCAB5-208	ENST00000536908	PRAG1	Q86YV5	1406 aa		14.07	□□□□□ -0.16
EFCAB5-208	ENST00000536908	XIRP1	Q702N8	1843 aa	Known RBP	14.07	□□□□□ -0.16
EFCAB5-208	ENST00000536908	LRRC7	Q96NW7	1537 aa		14.06	□□□□□ -0.16
EFCAB5-208	ENST00000536908	LTK	P29376	864 aa		14.06	□□□□□ -0.16
EFCAB5-208	ENST00000536908	ILDR1	Q86SU0	546 aa	Predicted RBP	14.06	□□□□□ -0.16
EFCAB5-208	ENST00000536908	TBX22	Q9Y458	520 aa		14.05	□□□□□ -0.16
EFCAB5-208	ENST00000536908	NRXN3	Q9Y4C0	1643 aa		14.05	□□□□□ -0.16
EFCAB5-208	ENST00000536908	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	14.05	□□□□□ -0.16
EFCAB5-208	ENST00000536908	XRN1	Q8IZH2	1706 aa	Known RBP	14.04	□□□□□ -0.16
EFCAB5-208	ENST00000536908	KCNA6	P17658	529 aa		14.04	□□□□□ -0.16
EFCAB5-208	ENST00000536908	SETD1A	O15047	1707 aa	Known RBP	14.02	□□□□□ -0.16
EFCAB5-208	ENST00000536908	ADAMTS13	Q76LX8	1427 aa		14.02	□□□□□ -0.17
EFCAB5-208	ENST00000536908	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.01	□□□□□ -0.17
EFCAB5-208	ENST00000536908	LAMC1	P11047	1609 aa		14.01	□□□□□ -0.17
EFCAB5-208	ENST00000536908	TRIM52	Q96A61	297 aa		14	□□□□□ -0.17
EFCAB5-208	ENST00000536908	MPHOSPH9	Q99550	1183 aa		13.99	□□□□□ -0.17
EFCAB5-208	ENST00000536908	RAB3GAP2	Q9H2M9	1393 aa		13.99	□□□□□ -0.17
EFCAB5-208	ENST00000536908	CCDC144A	A2RUR9	1427 aa		13.99	□□□□□ -0.17
EFCAB5-208	ENST00000536908	SPATA31E1	Q6ZUB1	1445 aa		13.99	□□□□□ -0.17
EFCAB5-208	ENST00000536908	ANKRD30B	Q9BXX2	1392 aa		13.98	□□□□□ -0.17
EFCAB5-208	ENST00000536908	STAC3	Q96MF2	364 aa		13.98	□□□□□ -0.17
EFCAB5-208	ENST00000536908	KNDC1	Q76NI1	1749 aa		13.98	□□□□□ -0.17
EFCAB5-208	ENST00000536908	MYOM2	P54296	1465 aa		13.97	□□□□□ -0.17
EFCAB5-208	ENST00000536908	ALK	Q9UM73	1620 aa		13.97	□□□□□ -0.17
EFCAB5-208	ENST00000536908	TOM1	O60784	492 aa		13.97	□□□□□ -0.17
EFCAB5-208	ENST00000536908	PPP1R15A	O75807	674 aa	Predicted RBP	13.96	□□□□□ -0.17
EFCAB5-208	ENST00000536908	DCC	P43146	1447 aa		13.96	□□□□□ -0.17
EFCAB5-208	ENST00000536908	VGF	O15240	615 aa	Predicted RBP	13.96	□□□□□ -0.17
EFCAB5-208	ENST00000536908	NRXN1	Q9ULB1	1477 aa		13.95	□□□□□ -0.18
EFCAB5-208	ENST00000536908	PTCH1	Q13635	1447 aa		13.93	□□□□□ -0.18
EFCAB5-208	ENST00000536908	FAM135B	Q49AJ0	1406 aa		13.92	□□□□□ -0.18
EFCAB5-208	ENST00000536908	CHGA	P10645	457 aa	Known RBP	13.91	□□□□□ -0.18
EFCAB5-208	ENST00000536908	KIAA1210	Q9ULL0	1709 aa		13.9	□□□□□ -0.18
EFCAB5-208	ENST00000536908	UBAP1L	F5GYI3	381 aa		13.9	□□□□□ -0.18
EFCAB5-208	ENST00000536908	TECPR2	O15040	1411 aa		13.89	□□□□□ -0.19
EFCAB5-208	ENST00000536908	ZNF326	Q5BKZ1	582 aa	Known RBP	13.89	□□□□□ -0.19
EFCAB5-208	ENST00000536908	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.89	□□□□□ -0.19
EFCAB5-208	ENST00000536908	MSH6	P52701	1360 aa		13.89	□□□□□ -0.19
EFCAB5-208	ENST00000536908	TMEM94	Q12767	1356 aa		13.89	□□□□□ -0.19
EFCAB5-208	ENST00000536908	PIK3C2G	O75747	1445 aa		13.88	□□□□□ -0.19
EFCAB5-208	ENST00000536908	PTPRU	Q92729	1446 aa		13.88	□□□□□ -0.19
EFCAB5-208	ENST00000536908	SIRT1	Q96EB6	747 aa		13.87	□□□□□ -0.19
EFCAB5-208	ENST00000536908	PROSER2	Q86WR7	435 aa	Predicted RBP	13.86	□□□□□ -0.19
EFCAB5-208	ENST00000536908	SLC26A8	Q96RN1	970 aa		13.86	□□□□□ -0.19
EFCAB5-208	ENST00000536908	DLC1	Q96QB1	1528 aa		13.86	□□□□□ -0.19
EFCAB5-208	ENST00000536908	BCAN	Q96GW7	911 aa		13.85	□□□□□ -0.19
EFCAB5-208	ENST00000536908	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.85	□□□□□ -0.19
EFCAB5-208	ENST00000536908	ADGRL3	Q9HAR2	1447 aa		13.84	□□□□□ -0.19
EFCAB5-208	ENST00000536908	CDC42BPG	Q6DT37	1551 aa		13.84	□□□□□ -0.19
EFCAB5-208	ENST00000536908	ROBO1	Q9Y6N7	1651 aa		13.83	□□□□□ -0.19
EFCAB5-208	ENST00000536908	NALCN	Q8IZF0	1738 aa		13.83	□□□□□ -0.19
EFCAB5-208	ENST00000536908	LRPPRC	P42704	1394 aa	Known RBP	13.83	□□□□□ -0.2
EFCAB5-208	ENST00000536908	C19orf44	Q9H6X5	657 aa		13.82	□□□□□ -0.2
EFCAB5-208	ENST00000536908	AMOTL2	Q9Y2J4	779 aa		13.82	□□□□□ -0.2
EFCAB5-208	ENST00000536908	MET	P08581	1390 aa		13.82	□□□□□ -0.2
EFCAB5-208	ENST00000536908	ABCC11	Q96J66	1382 aa		13.82	□□□□□ -0.2
EFCAB5-208	ENST00000536908	NHSL1	Q5SYE7	1610 aa		13.81	□□□□□ -0.2
EFCAB5-208	ENST00000536908	CADPS2	Q86UW7	1296 aa		13.81	□□□□□ -0.2
EFCAB5-208	ENST00000536908	ASXL1	Q8IXJ9	1541 aa		13.81	□□□□□ -0.2
EFCAB5-208	ENST00000536908	ADGRB2	O60241	1585 aa		13.79	□□□□□ -0.2
EFCAB5-208	ENST00000536908	PHLPP1	O60346	1717 aa		13.79	□□□□□ -0.2
EFCAB5-208	ENST00000536908	C14orf93	Q9H972	538 aa	Known RBP	13.78	□□□□□ -0.2
EFCAB5-208	ENST00000536908	SHPRH	Q149N8	1683 aa		13.78	□□□□□ -0.2
EFCAB5-208	ENST00000536908	KIF1A	Q12756	1690 aa		13.77	□□□□□ -0.21
EFCAB5-208	ENST00000536908	FMN2	Q9NZ56	1722 aa		13.76	□□□□□ -0.21
EFCAB5-208	ENST00000536908	ADGRB1	O14514	1584 aa		13.76	□□□□□ -0.21
EFCAB5-208	ENST00000536908	COL16A1	Q07092	1604 aa	Predicted RBP	13.76	□□□□□ -0.21
EFCAB5-208	ENST00000536908	FOXD1	Q16676	465 aa		13.76	□□□□□ -0.21
EFCAB5-208	ENST00000536908	DHX57	Q6P158	1386 aa	Known RBP	13.76	□□□□□ -0.21
EFCAB5-208	ENST00000536908	MST1R	Q04912	1400 aa		13.76	□□□□□ -0.21
EFCAB5-208	ENST00000536908	ADGRF5	Q8IZF2	1346 aa		13.75	□□□□□ -0.21
EFCAB5-208	ENST00000536908	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.75	□□□□□ -0.21
EFCAB5-208	ENST00000536908	ATF3	P18847	181 aa		13.74	□□□□□ -0.21
EFCAB5-208	ENST00000536908	MED1	Q15648	1581 aa	Predicted RBP	13.74	□□□□□ -0.21
EFCAB5-208	ENST00000536908	SLAIN2	Q9P270	581 aa		13.74	□□□□□ -0.21
EFCAB5-208	ENST00000536908	TRIM26	Q12899	539 aa	Predicted RBP	13.73	□□□□□ -0.21
EFCAB5-208	ENST00000536908	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.73	□□□□□ -0.21
EFCAB5-208	ENST00000536908	ROBO2	Q9HCK4	1378 aa		13.72	□□□□□ -0.21
EFCAB5-208	ENST00000536908	EIF3A	Q14152	1382 aa	Known RBP	13.72	□□□□□ -0.21
EFCAB5-208	ENST00000536908	HSPA1L	P34931	641 aa		13.72	□□□□□ -0.21
EFCAB5-208	ENST00000536908	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.71	□□□□□ -0.22
EFCAB5-208	ENST00000536908	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.69	□□□□□ -0.22
EFCAB5-208	ENST00000536908	C1orf167	Q5SNV9	1468 aa		13.69	□□□□□ -0.22
EFCAB5-208	ENST00000536908	ANKAR	Q7Z5J8	1434 aa		13.69	□□□□□ -0.22
EFCAB5-208	ENST00000536908	PIP4K2B	P78356	416 aa		13.69	□□□□□ -0.22
EFCAB5-208	ENST00000536908	JCAD	Q9P266	1359 aa		13.69	□□□□□ -0.22
EFCAB5-208	ENST00000536908	RGL3	Q3MIN7	710 aa		13.68	□□□□□ -0.22
EFCAB5-208	ENST00000536908	ITSN1	Q15811	1721 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms