RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 STAG3Q9UJ98 1225 aa27.56■■■□□ 2
LTBR-206ENST00000536876 RPRD2Q5VT52 1461 aaKnown RBP27.56■■■□□ 2
LTBR-206ENST00000536876 RBM33Q96EV2 1170 aaKnown RBP27.55■■■□□ 2
LTBR-206ENST00000536876 UNC13BO14795 1591 aa27.55■■■□□ 2
LTBR-206ENST00000536876 PHLPP1O60346 1717 aa27.53■■■□□ 2
LTBR-206ENST00000536876 SETD1AO15047 1707 aaKnown RBP27.51■■□□□ 1.99
LTBR-206ENST00000536876 E9PCH4 1651 aa27.5■■□□□ 1.99
LTBR-206ENST00000536876 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
LTBR-206ENST00000536876 ANKRD50Q9ULJ7 1429 aa27.49■■□□□ 1.99
LTBR-206ENST00000536876 PROSER2Q86WR7 435 aaPredicted RBP27.48■■□□□ 1.99
LTBR-206ENST00000536876 PLEKHG1Q9ULL1 1385 aa27.47■■□□□ 1.99
LTBR-206ENST00000536876 APLP2Q06481 763 aa27.46■■□□□ 1.99
LTBR-206ENST00000536876 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
LTBR-206ENST00000536876 SLC52A1Q9NWF4 448 aa27.46■■□□□ 1.99
LTBR-206ENST00000536876 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
LTBR-206ENST00000536876 IQGAP3Q86VI3 1631 aa27.42■■□□□ 1.98
LTBR-206ENST00000536876 MSH6P52701 1360 aa27.42■■□□□ 1.98
LTBR-206ENST00000536876 ADAMTS13Q76LX8 1427 aa27.41■■□□□ 1.98
LTBR-206ENST00000536876 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.4■■□□□ 1.98
LTBR-206ENST00000536876 DIP2AQ14689 1571 aa27.39■■□□□ 1.98
LTBR-206ENST00000536876 LRP6O75581 1613 aa27.37■■□□□ 1.97
LTBR-206ENST00000536876 AHDC1Q5TGY3 1603 aaPredicted RBP27.35■■□□□ 1.97
LTBR-206ENST00000536876 FAM50AQ14320 339 aaKnown RBP27.35■■□□□ 1.97
LTBR-206ENST00000536876 SLAIN2Q9P270 581 aa27.34■■□□□ 1.97
LTBR-206ENST00000536876 SHPRHQ149N8 1683 aa27.33■■□□□ 1.97
LTBR-206ENST00000536876 NRXN3Q9Y4C0 1643 aa27.33■■□□□ 1.97
LTBR-206ENST00000536876 JCADQ9P266 1359 aa27.33■■□□□ 1.97
LTBR-206ENST00000536876 BCANQ96GW7 911 aa27.31■■□□□ 1.96
LTBR-206ENST00000536876 NCOA3Q9Y6Q9 1424 aa27.31■■□□□ 1.96
LTBR-206ENST00000536876 XRN1Q8IZH2 1706 aaKnown RBP27.3■■□□□ 1.96
LTBR-206ENST00000536876 PPP1R15AO75807 674 aaPredicted RBP27.28■■□□□ 1.96
LTBR-206ENST00000536876 TBX22Q9Y458 520 aa27.28■■□□□ 1.96
LTBR-206ENST00000536876 TRPM2O94759 1503 aa27.27■■□□□ 1.96
LTBR-206ENST00000536876 PTPRUQ92729 1446 aa27.27■■□□□ 1.96
LTBR-206ENST00000536876 ROCK1Q13464 1354 aa27.25■■□□□ 1.95
LTBR-206ENST00000536876 SPHKAPQ2M3C7 1700 aa27.25■■□□□ 1.95
LTBR-206ENST00000536876 NUTM2DQ5VT03 806 aaPredicted RBP27.25■■□□□ 1.95
LTBR-206ENST00000536876 PIK3R4Q99570 1358 aa27.23■■□□□ 1.95
LTBR-206ENST00000536876 SETBP1Q9Y6X0 1596 aa27.22■■□□□ 1.95
LTBR-206ENST00000536876 NHSL1Q5SYE7 1610 aa27.2■■□□□ 1.95
LTBR-206ENST00000536876 CHGAP10645 457 aaKnown RBP27.19■■□□□ 1.94
LTBR-206ENST00000536876 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.19■■□□□ 1.94
LTBR-206ENST00000536876 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
LTBR-206ENST00000536876 ASXL1Q8IXJ9 1541 aa27.16■■□□□ 1.94
LTBR-206ENST00000536876 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
LTBR-206ENST00000536876 NALCNQ8IZF0 1738 aa27.14■■□□□ 1.94
LTBR-206ENST00000536876 DCCP43146 1447 aa27.14■■□□□ 1.93
LTBR-206ENST00000536876 CADPS2Q86UW7 1296 aa27.13■■□□□ 1.93
LTBR-206ENST00000536876 C19orf44Q9H6X5 657 aa27.13■■□□□ 1.93
LTBR-206ENST00000536876 CLTCL1P53675 1640 aa27.12■■□□□ 1.93
LTBR-206ENST00000536876 NUP155O75694 1391 aa27.12■■□□□ 1.93
LTBR-206ENST00000536876 C14orf37Q86TY3 774 aa27.12■■□□□ 1.93
LTBR-206ENST00000536876 MST1RQ04912 1400 aa27.11■■□□□ 1.93
LTBR-206ENST00000536876 BRINP3Q76B58 766 aa27.1■■□□□ 1.93
LTBR-206ENST00000536876 AMOTL2Q9Y2J4 779 aa27.1■■□□□ 1.93
LTBR-206ENST00000536876 NEXMIFQ5QGS0 1516 aa27.1■■□□□ 1.93
LTBR-206ENST00000536876 ATF3P18847 181 aa27.08■■□□□ 1.93
LTBR-206ENST00000536876 METP08581 1390 aa27.06■■□□□ 1.92
LTBR-206ENST00000536876 SETD5Q9C0A6 1442 aa27.05■■□□□ 1.92
LTBR-206ENST00000536876 ADGRL3Q9HAR2 1447 aa27.02■■□□□ 1.92
LTBR-206ENST00000536876 MEX3CQ5U5Q3 659 aaKnown RBP27.02■■□□□ 1.92
LTBR-206ENST00000536876 LAMC1P11047 1609 aa27.01■■□□□ 1.92
LTBR-206ENST00000536876 ZNF772Q68DY9 489 aaPredicted RBP27.01■■□□□ 1.91
LTBR-206ENST00000536876 KIF1BO60333 1816 aa27.01■■□□□ 1.91
LTBR-206ENST00000536876 CDK12Q9NYV4 1490 aaPredicted RBP27■■□□□ 1.91
LTBR-206ENST00000536876 UPF1Q92900 1129 aaKnown RBP eCLIP26.99■■□□□ 1.91
LTBR-206ENST00000536876 TRIM52Q96A61 297 aa26.99■■□□□ 1.91
LTBR-206ENST00000536876 ITGAEP38570 1179 aa26.97■■□□□ 1.91
LTBR-206ENST00000536876 PNPLA6Q8IY17 1366 aa26.94■■□□□ 1.9
LTBR-206ENST00000536876 NUTM2BA6NNL0 878 aaPredicted RBP26.93■■□□□ 1.9
LTBR-206ENST00000536876 NUTM2EB1AL46 878 aaPredicted RBP26.93■■□□□ 1.9
LTBR-206ENST00000536876 NUTM2AQ8IVF1 878 aaPredicted RBP26.93■■□□□ 1.9
LTBR-206ENST00000536876 AFF2P51816 1311 aa26.92■■□□□ 1.9
LTBR-206ENST00000536876 DDX17Q92841 729 aaKnown RBP26.92■■□□□ 1.9
LTBR-206ENST00000536876 RGS12O14924 1447 aa26.91■■□□□ 1.9
LTBR-206ENST00000536876 PTCH1Q13635 1447 aa26.9■■□□□ 1.9
LTBR-206ENST00000536876 ZNF326Q5BKZ1 582 aaKnown RBP26.89■■□□□ 1.9
LTBR-206ENST00000536876 PPLO60437 1756 aa26.89■■□□□ 1.89
LTBR-206ENST00000536876 C1orf167Q5SNV9 1468 aa26.88■■□□□ 1.89
LTBR-206ENST00000536876 RXRBP28702 533 aa26.88■■□□□ 1.89
LTBR-206ENST00000536876 PRAG1Q86YV5 1406 aa26.88■■□□□ 1.89
LTBR-206ENST00000536876 NAIPQ13075 1403 aa26.86■■□□□ 1.89
LTBR-206ENST00000536876 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
LTBR-206ENST00000536876 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
LTBR-206ENST00000536876 COL22A1Q8NFW1 1626 aaPredicted RBP26.83■■□□□ 1.89
LTBR-206ENST00000536876 RRBP1Q9P2E9 1410 aaKnown RBP26.83■■□□□ 1.89
LTBR-206ENST00000536876 LRRC59Q96AG4 307 aaKnown RBP26.82■■□□□ 1.88
LTBR-206ENST00000536876 C8orf37Q96NL8 207 aa26.8■■□□□ 1.88
LTBR-206ENST00000536876 MARF1Q9Y4F3 1742 aaKnown RBP26.76■■□□□ 1.88
LTBR-206ENST00000536876 CDC42BPGQ6DT37 1551 aa26.75■■□□□ 1.87
LTBR-206ENST00000536876 SOS2Q07890 1332 aaPredicted RBP26.75■■□□□ 1.87
LTBR-206ENST00000536876 IFT172Q9UG01 1749 aa26.74■■□□□ 1.87
LTBR-206ENST00000536876 ORAI2Q96SN7 254 aa26.73■■□□□ 1.87
LTBR-206ENST00000536876 RBM6P78332 1123 aaKnown RBP26.72■■□□□ 1.87
LTBR-206ENST00000536876 QTRT2Q9H974 415 aaKnown RBP26.72■■□□□ 1.87
LTBR-206ENST00000536876 EP400Q96L91 3159 aa26.72■■□□□ 1.87
LTBR-206ENST00000536876 MYOM2P54296 1465 aa26.7■■□□□ 1.87
LTBR-206ENST00000536876 PXDNQ92626 1479 aa26.7■■□□□ 1.87
LTBR-206ENST00000536876 ADAMTS2O95450 1211 aa26.7■■□□□ 1.86
LTBR-206ENST00000536876 HFM1A2PYH4 1435 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms