RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
CCDC60-203ENST00000536742 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
CCDC60-203ENST00000536742 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
CCDC60-203ENST00000536742 MAP3K7O43318 606 aa12.61□□□□□ -0.39
CCDC60-203ENST00000536742 COL9A1P20849 921 aa12.61□□□□□ -0.39
CCDC60-203ENST00000536742 RBM26Q5T8P6 1007 aaKnown RBP12.61□□□□□ -0.39
CCDC60-203ENST00000536742 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
CCDC60-203ENST00000536742 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
CCDC60-203ENST00000536742 BHMG1C9JSJ3 638 aaPredicted RBP12.59□□□□□ -0.39
CCDC60-203ENST00000536742 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
CCDC60-203ENST00000536742 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
CCDC60-203ENST00000536742 PROX2Q3B8N5 592 aa12.58□□□□□ -0.4
CCDC60-203ENST00000536742 RABGEF1Q9UJ41 708 aa12.58□□□□□ -0.4
CCDC60-203ENST00000536742 SPATA31D1Q6ZQQ2 1576 aa12.57□□□□□ -0.4
CCDC60-203ENST00000536742 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
CCDC60-203ENST00000536742 WNT2BQ93097 391 aa12.55□□□□□ -0.4
CCDC60-203ENST00000536742 DIP2BQ9P265 1576 aa12.55□□□□□ -0.4
CCDC60-203ENST00000536742 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
CCDC60-203ENST00000536742 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
CCDC60-203ENST00000536742 ZMYND10O75800 440 aa12.54□□□□□ -0.4
CCDC60-203ENST00000536742 ONECUT3O60422 494 aaPredicted RBP12.53□□□□□ -0.4
CCDC60-203ENST00000536742 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
CCDC60-203ENST00000536742 WIZO95785 1651 aa12.52□□□□□ -0.4
CCDC60-203ENST00000536742 NUTM2FA1L443 756 aa12.52□□□□□ -0.41
CCDC60-203ENST00000536742 PTPN5P54829 565 aa12.52□□□□□ -0.41
CCDC60-203ENST00000536742 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
CCDC60-203ENST00000536742 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
CCDC60-203ENST00000536742 FCHSD2O94868 740 aa12.51□□□□□ -0.41
CCDC60-203ENST00000536742 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
CCDC60-203ENST00000536742 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
CCDC60-203ENST00000536742 TSPOAP1O95153 1857 aa12.51□□□□□ -0.41
CCDC60-203ENST00000536742 TRIM6-TRIM34B2RNG4 842 aa12.5□□□□□ -0.41
CCDC60-203ENST00000536742 HIC1Q14526 733 aa12.5□□□□□ -0.41
CCDC60-203ENST00000536742 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
CCDC60-203ENST00000536742 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
CCDC60-203ENST00000536742 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
CCDC60-203ENST00000536742 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
CCDC60-203ENST00000536742 GPR37O15354 613 aa12.48□□□□□ -0.41
CCDC60-203ENST00000536742 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
CCDC60-203ENST00000536742 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
CCDC60-203ENST00000536742 ANKK1Q8NFD2 765 aa12.48□□□□□ -0.41
CCDC60-203ENST00000536742 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
CCDC60-203ENST00000536742 PTGDRQ13258 359 aa12.46□□□□□ -0.41
CCDC60-203ENST00000536742 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.41
CCDC60-203ENST00000536742 CEP170Q5SW79 1584 aa12.46□□□□□ -0.42
CCDC60-203ENST00000536742 SOGA1O94964 1423 aa12.45□□□□□ -0.42
CCDC60-203ENST00000536742 GNPATO15228 680 aa12.45□□□□□ -0.42
CCDC60-203ENST00000536742 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
CCDC60-203ENST00000536742 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
CCDC60-203ENST00000536742 PRSS12P56730 875 aa12.43□□□□□ -0.42
CCDC60-203ENST00000536742 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
CCDC60-203ENST00000536742 ZFRQ96KR1 1074 aaKnown RBP12.42□□□□□ -0.42
CCDC60-203ENST00000536742 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
CCDC60-203ENST00000536742 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
CCDC60-203ENST00000536742 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
CCDC60-203ENST00000536742 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
CCDC60-203ENST00000536742 MAP2K5Q13163 448 aa12.4□□□□□ -0.42
CCDC60-203ENST00000536742 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
CCDC60-203ENST00000536742 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
CCDC60-203ENST00000536742 AK7Q96M32 723 aa12.39□□□□□ -0.43
CCDC60-203ENST00000536742 CDHR5Q9HBB8 845 aa12.38□□□□□ -0.43
CCDC60-203ENST00000536742 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
CCDC60-203ENST00000536742 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
CCDC60-203ENST00000536742 BCAMP50895 628 aa12.36□□□□□ -0.43
CCDC60-203ENST00000536742 SLC24A3Q9HC58 644 aa12.36□□□□□ -0.43
CCDC60-203ENST00000536742 NBPF26B4DH59 902 aa12.35□□□□□ -0.43
CCDC60-203ENST00000536742 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
CCDC60-203ENST00000536742 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
CCDC60-203ENST00000536742 IRF6O14896 467 aa12.33□□□□□ -0.44
CCDC60-203ENST00000536742 TATDN2Q93075 761 aa12.33□□□□□ -0.44
CCDC60-203ENST00000536742 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
CCDC60-203ENST00000536742 SMAPO00193 183 aa12.32□□□□□ -0.44
CCDC60-203ENST00000536742 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
CCDC60-203ENST00000536742 NUP160Q12769 1436 aa12.3□□□□□ -0.44
CCDC60-203ENST00000536742 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
CCDC60-203ENST00000536742 GRIN2AQ12879 1464 aa12.3□□□□□ -0.44
CCDC60-203ENST00000536742 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
CCDC60-203ENST00000536742 NYAP1Q6ZVC0 841 aa12.3□□□□□ -0.44
CCDC60-203ENST00000536742 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
CCDC60-203ENST00000536742 FAM198AQ9UFP1 575 aa12.3□□□□□ -0.44
CCDC60-203ENST00000536742 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
CCDC60-203ENST00000536742 TSR3Q9UJK0 312 aaKnown RBP12.29□□□□□ -0.44
CCDC60-203ENST00000536742 HPS5Q9UPZ3 1129 aa12.29□□□□□ -0.44
CCDC60-203ENST00000536742 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
CCDC60-203ENST00000536742 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-203ENST00000536742 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-203ENST00000536742 PADI6Q6TGC4 694 aa12.28□□□□□ -0.44
CCDC60-203ENST00000536742 WBP1LQ9NX94 342 aa12.28□□□□□ -0.44
CCDC60-203ENST00000536742 OATP04181 439 aa12.27□□□□□ -0.45
CCDC60-203ENST00000536742 CCDC102AQ96A19 550 aa12.27□□□□□ -0.45
CCDC60-203ENST00000536742 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
CCDC60-203ENST00000536742 PPRC1Q5VV67 1664 aaKnown RBP12.26□□□□□ -0.45
CCDC60-203ENST00000536742 FECHP22830 423 aa12.26□□□□□ -0.45
CCDC60-203ENST00000536742 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
CCDC60-203ENST00000536742 TRIM66O15016 1216 aa12.25□□□□□ -0.45
CCDC60-203ENST00000536742 PPP4CP60510 307 aa12.25□□□□□ -0.45
CCDC60-203ENST00000536742 AMHR2Q16671 573 aa12.24□□□□□ -0.45
CCDC60-203ENST00000536742 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
CCDC60-203ENST00000536742 PTPRMP28827 1452 aa12.23□□□□□ -0.45
CCDC60-203ENST00000536742 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms