RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 UBR1Q8IWV7 1749 aa18.25■□□□□ 0.51
CDK5RAP3-202ENST00000536708 MYO3AQ8NEV4 1616 aa18.25■□□□□ 0.51
CDK5RAP3-202ENST00000536708 TNRQ92752 1358 aa18.24■□□□□ 0.51
CDK5RAP3-202ENST00000536708 MYOM2P54296 1465 aa18.23■□□□□ 0.51
CDK5RAP3-202ENST00000536708 SLC52A1Q9NWF4 448 aa18.22■□□□□ 0.51
CDK5RAP3-202ENST00000536708 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-202ENST00000536708 A2ML1A8K2U0 1454 aa18.2■□□□□ 0.5
CDK5RAP3-202ENST00000536708 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-202ENST00000536708 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-202ENST00000536708 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
CDK5RAP3-202ENST00000536708 NRXN1Q9ULB1 1477 aa18.18■□□□□ 0.5
CDK5RAP3-202ENST00000536708 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
CDK5RAP3-202ENST00000536708 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP3-202ENST00000536708 ROCK2O75116 1388 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-202ENST00000536708 LAMC1P11047 1609 aa18.15■□□□□ 0.5
CDK5RAP3-202ENST00000536708 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
CDK5RAP3-202ENST00000536708 PIK3C2GO75747 1445 aa18.15■□□□□ 0.5
CDK5RAP3-202ENST00000536708 NLRP1Q9C000 1473 aa18.15■□□□□ 0.5
CDK5RAP3-202ENST00000536708 IQGAP1P46940 1657 aa18.14■□□□□ 0.49
CDK5RAP3-202ENST00000536708 PTPRMP28827 1452 aa18.14■□□□□ 0.49
CDK5RAP3-202ENST00000536708 STAG3Q9UJ98 1225 aa18.14■□□□□ 0.49
CDK5RAP3-202ENST00000536708 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-202ENST00000536708 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-202ENST00000536708 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-202ENST00000536708 USP47Q96K76 1375 aa18.11■□□□□ 0.49
CDK5RAP3-202ENST00000536708 ZFYVE9O95405 1425 aa18.11■□□□□ 0.49
CDK5RAP3-202ENST00000536708 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
CDK5RAP3-202ENST00000536708 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
CDK5RAP3-202ENST00000536708 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
CDK5RAP3-202ENST00000536708 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
CDK5RAP3-202ENST00000536708 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
CDK5RAP3-202ENST00000536708 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-202ENST00000536708 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
CDK5RAP3-202ENST00000536708 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.49
CDK5RAP3-202ENST00000536708 CFAP70Q5T0N1 1121 aa18.08■□□□□ 0.49
CDK5RAP3-202ENST00000536708 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
CDK5RAP3-202ENST00000536708 SETD1BQ9UPS6 1966 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP3-202ENST00000536708 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDK5RAP3-202ENST00000536708 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP3-202ENST00000536708 SETBP1Q9Y6X0 1596 aa18.06■□□□□ 0.48
CDK5RAP3-202ENST00000536708 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
CDK5RAP3-202ENST00000536708 TMEM2Q9UHN6 1383 aa18.05■□□□□ 0.48
CDK5RAP3-202ENST00000536708 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
CDK5RAP3-202ENST00000536708 VGFO15240 615 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-202ENST00000536708 SLIT1O75093 1534 aa18.03■□□□□ 0.48
CDK5RAP3-202ENST00000536708 ARHGEF28Q8N1W1 1705 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-202ENST00000536708 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
CDK5RAP3-202ENST00000536708 KDM4FA0A1W2PPD8 638 aa18.02■□□□□ 0.47
CDK5RAP3-202ENST00000536708 CCER2I3L3R5 266 aa18.01■□□□□ 0.47
CDK5RAP3-202ENST00000536708 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-202ENST00000536708 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
CDK5RAP3-202ENST00000536708 ST20-MTHFSA0A0A6YYL1 179 aa17.99■□□□□ 0.47
CDK5RAP3-202ENST00000536708 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-202ENST00000536708 LTKP29376 864 aa17.99■□□□□ 0.47
CDK5RAP3-202ENST00000536708 QRICH2Q9H0J4 1663 aa17.98■□□□□ 0.47
CDK5RAP3-202ENST00000536708 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-202ENST00000536708 WASHC2AQ641Q2 1341 aa17.95■□□□□ 0.46
CDK5RAP3-202ENST00000536708 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
CDK5RAP3-202ENST00000536708 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDK5RAP3-202ENST00000536708 ANP32CO43423 234 aa17.93■□□□□ 0.46
CDK5RAP3-202ENST00000536708 THEMISQ8N1K5 641 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-202ENST00000536708 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
CDK5RAP3-202ENST00000536708 TXNDC2Q86VQ3 553 aa17.92■□□□□ 0.46
CDK5RAP3-202ENST00000536708 TRAK1Q9UPV9 953 aa17.92■□□□□ 0.46
CDK5RAP3-202ENST00000536708 CCDC7Q96M83 1385 aa17.92■□□□□ 0.46
CDK5RAP3-202ENST00000536708 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
CDK5RAP3-202ENST00000536708 METP08581 1390 aa17.91■□□□□ 0.46
CDK5RAP3-202ENST00000536708 DISP3Q9P2K9 1392 aa17.91■□□□□ 0.46
CDK5RAP3-202ENST00000536708 TESK2Q96S53 571 aa17.91■□□□□ 0.46
CDK5RAP3-202ENST00000536708 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-202ENST00000536708 YTHDC2Q9H6S0 1430 aaKnown RBP17.91■□□□□ 0.46
CDK5RAP3-202ENST00000536708 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-202ENST00000536708 KNDC1Q76NI1 1749 aa17.9■□□□□ 0.46
CDK5RAP3-202ENST00000536708 BCANQ96GW7 911 aa17.9■□□□□ 0.46
CDK5RAP3-202ENST00000536708 STK26Q9P289 416 aa17.89■□□□□ 0.45
CDK5RAP3-202ENST00000536708 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
CDK5RAP3-202ENST00000536708 MED14O60244 1454 aa17.88■□□□□ 0.45
CDK5RAP3-202ENST00000536708 SLC26A8Q96RN1 970 aa17.87■□□□□ 0.45
CDK5RAP3-202ENST00000536708 POLR3GLQ9BT43 218 aa17.87■□□□□ 0.45
CDK5RAP3-202ENST00000536708 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-202ENST00000536708 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
CDK5RAP3-202ENST00000536708 MYOM1P52179 1685 aa17.86■□□□□ 0.45
CDK5RAP3-202ENST00000536708 DIP2AQ14689 1571 aa17.86■□□□□ 0.45
CDK5RAP3-202ENST00000536708 CPS1P31327 1500 aa17.84■□□□□ 0.45
CDK5RAP3-202ENST00000536708 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-202ENST00000536708 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
CDK5RAP3-202ENST00000536708 PTPRUQ92729 1446 aa17.83■□□□□ 0.45
CDK5RAP3-202ENST00000536708 TULP4Q9NRJ4 1543 aa17.83■□□□□ 0.44
CDK5RAP3-202ENST00000536708 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-202ENST00000536708 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
CDK5RAP3-202ENST00000536708 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-202ENST00000536708 HSPA2P54652 639 aa17.82■□□□□ 0.44
CDK5RAP3-202ENST00000536708 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
CDK5RAP3-202ENST00000536708 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
CDK5RAP3-202ENST00000536708 CHD2O14647 1828 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-202ENST00000536708 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
CDK5RAP3-202ENST00000536708 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
CDK5RAP3-202ENST00000536708 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
CDK5RAP3-202ENST00000536708 TECPR2O15040 1411 aa17.79■□□□□ 0.44
CDK5RAP3-202ENST00000536708 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms