RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 TMEM94Q12767 1356 aa31.65■■■□□ 2.66
LTBR-205ENST00000535739 E9PCH4 1651 aa31.64■■■□□ 2.66
LTBR-205ENST00000535739 ITGAEP38570 1179 aa31.63■■■□□ 2.65
LTBR-205ENST00000535739 TMEM131LA2VDJ0 1609 aa31.63■■■□□ 2.65
LTBR-205ENST00000535739 ZFYVE9O95405 1425 aa31.62■■■□□ 2.65
LTBR-205ENST00000535739 PROSER2Q86WR7 435 aaPredicted RBP31.61■■■□□ 2.65
LTBR-205ENST00000535739 RBM33Q96EV2 1170 aaKnown RBP31.61■■■□□ 2.65
LTBR-205ENST00000535739 IQGAP3Q86VI3 1631 aa31.6■■■□□ 2.65
LTBR-205ENST00000535739 RIMS2Q9UQ26 1411 aa31.59■■■□□ 2.65
LTBR-205ENST00000535739 NWD1Q149M9 1564 aa31.58■■■□□ 2.65
LTBR-205ENST00000535739 CHGAP10645 457 aaKnown RBP31.57■■■□□ 2.64
LTBR-205ENST00000535739 PLEKHG1Q9ULL1 1385 aa31.56■■■□□ 2.64
LTBR-205ENST00000535739 PPP1R15AO75807 674 aaPredicted RBP31.56■■■□□ 2.64
LTBR-205ENST00000535739 NKTRP30414 1462 aaKnown RBP31.55■■■□□ 2.64
LTBR-205ENST00000535739 PHF23Q9BUL5 403 aaPredicted RBP31.55■■■□□ 2.64
LTBR-205ENST00000535739 CHD2O14647 1828 aaKnown RBP31.54■■■□□ 2.64
LTBR-205ENST00000535739 HDGFP51858 240 aaKnown RBP31.54■■■□□ 2.64
LTBR-205ENST00000535739 NUP155O75694 1391 aa31.54■■■□□ 2.64
LTBR-205ENST00000535739 FAM135BQ49AJ0 1406 aa31.53■■■□□ 2.64
LTBR-205ENST00000535739 NUTM2DQ5VT03 806 aaPredicted RBP31.49■■■□□ 2.63
LTBR-205ENST00000535739 ROBO1Q9Y6N7 1651 aa31.48■■■□□ 2.63
LTBR-205ENST00000535739 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.48■■■□□ 2.63
LTBR-205ENST00000535739 TBX22Q9Y458 520 aa31.45■■■□□ 2.63
LTBR-205ENST00000535739 MSH6P52701 1360 aa31.44■■■□□ 2.62
LTBR-205ENST00000535739 ADAMTS13Q76LX8 1427 aa31.41■■■□□ 2.62
LTBR-205ENST00000535739 SPHKAPQ2M3C7 1700 aa31.38■■■□□ 2.61
LTBR-205ENST00000535739 SLAIN2Q9P270 581 aa31.37■■■□□ 2.61
LTBR-205ENST00000535739 DIP2AQ14689 1571 aa31.37■■■□□ 2.61
LTBR-205ENST00000535739 RGS17Q9UGC6 210 aaPredicted RBP31.33■■■□□ 2.61
LTBR-205ENST00000535739 RRBP1Q9P2E9 1410 aaKnown RBP31.32■■■□□ 2.61
LTBR-205ENST00000535739 PHLPP1O60346 1717 aa31.31■■■□□ 2.6
LTBR-205ENST00000535739 PIK3R4Q99570 1358 aa31.3■■■□□ 2.6
LTBR-205ENST00000535739 C14orf37Q86TY3 774 aa31.3■■■□□ 2.6
LTBR-205ENST00000535739 NCOA3Q9Y6Q9 1424 aa31.3■■■□□ 2.6
LTBR-205ENST00000535739 TRPM2O94759 1503 aa31.29■■■□□ 2.6
LTBR-205ENST00000535739 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.27■■■□□ 2.6
LTBR-205ENST00000535739 PTPRUQ92729 1446 aa31.26■■■□□ 2.6
LTBR-205ENST00000535739 ZNF326Q5BKZ1 582 aaKnown RBP31.26■■■□□ 2.59
LTBR-205ENST00000535739 AMOTL2Q9Y2J4 779 aa31.26■■■□□ 2.59
LTBR-205ENST00000535739 NAIPQ13075 1403 aa31.25■■■□□ 2.59
LTBR-205ENST00000535739 NRXN3Q9Y4C0 1643 aa31.25■■■□□ 2.59
LTBR-205ENST00000535739 CLTCL1P53675 1640 aa31.24■■■□□ 2.59
LTBR-205ENST00000535739 C19orf44Q9H6X5 657 aa31.22■■■□□ 2.59
LTBR-205ENST00000535739 SETBP1Q9Y6X0 1596 aa31.21■■■□□ 2.59
LTBR-205ENST00000535739 CADPS2Q86UW7 1296 aa31.2■■■□□ 2.59
LTBR-205ENST00000535739 ATF3P18847 181 aa31.19■■■□□ 2.58
LTBR-205ENST00000535739 COL16A1Q07092 1604 aaPredicted RBP31.18■■■□□ 2.58
LTBR-205ENST00000535739 KIF1BO60333 1816 aa31.18■■■□□ 2.58
LTBR-205ENST00000535739 XRN1Q8IZH2 1706 aaKnown RBP31.18■■■□□ 2.58
LTBR-205ENST00000535739 JCADQ9P266 1359 aa31.17■■■□□ 2.58
LTBR-205ENST00000535739 NEXMIFQ5QGS0 1516 aa31.15■■■□□ 2.58
LTBR-205ENST00000535739 POTEAQ6S8J7 498 aa31.15■■■□□ 2.58
LTBR-205ENST00000535739 METP08581 1390 aa31.14■■■□□ 2.58
LTBR-205ENST00000535739 TRIM52Q96A61 297 aa31.13■■■□□ 2.57
LTBR-205ENST00000535739 HFM1A2PYH4 1435 aa31.1■■■□□ 2.57
LTBR-205ENST00000535739 AHDC1Q5TGY3 1603 aaPredicted RBP31.09■■■□□ 2.57
LTBR-205ENST00000535739 DCCP43146 1447 aa31.07■■■□□ 2.56
LTBR-205ENST00000535739 BRINP3Q76B58 766 aa31.06■■■□□ 2.56
LTBR-205ENST00000535739 SLC4A1APQ9BWU0 796 aaKnown RBP31.03■■■□□ 2.56
LTBR-205ENST00000535739 LRP6O75581 1613 aa31.02■■■□□ 2.56
LTBR-205ENST00000535739 SHPRHQ149N8 1683 aa31.01■■■□□ 2.55
LTBR-205ENST00000535739 SPATA31A6Q5VVP1 1343 aa31■■■□□ 2.55
LTBR-205ENST00000535739 MST1RQ04912 1400 aa31■■■□□ 2.55
LTBR-205ENST00000535739 ASXL1Q8IXJ9 1541 aa30.98■■■□□ 2.55
LTBR-205ENST00000535739 NALCNQ8IZF0 1738 aa30.98■■■□□ 2.55
LTBR-205ENST00000535739 SETD1AO15047 1707 aaKnown RBP30.98■■■□□ 2.55
LTBR-205ENST00000535739 ADGRL3Q9HAR2 1447 aa30.98■■■□□ 2.55
LTBR-205ENST00000535739 VGFO15240 615 aaPredicted RBP30.97■■■□□ 2.55
LTBR-205ENST00000535739 MEX3CQ5U5Q3 659 aaKnown RBP30.95■■■□□ 2.55
LTBR-205ENST00000535739 PPLO60437 1756 aa30.94■■■□□ 2.54
LTBR-205ENST00000535739 NHSL1Q5SYE7 1610 aa30.94■■■□□ 2.54
LTBR-205ENST00000535739 FOXD1Q16676 465 aa30.93■■■□□ 2.54
LTBR-205ENST00000535739 RPGRIP1LQ68CZ1 1315 aa30.92■■■□□ 2.54
LTBR-205ENST00000535739 NUTM2BA6NNL0 878 aaPredicted RBP30.88■■■□□ 2.53
LTBR-205ENST00000535739 NUTM2EB1AL46 878 aaPredicted RBP30.88■■■□□ 2.53
LTBR-205ENST00000535739 NUTM2AQ8IVF1 878 aaPredicted RBP30.88■■■□□ 2.53
LTBR-205ENST00000535739 DDX17Q92841 729 aaKnown RBP30.88■■■□□ 2.53
LTBR-205ENST00000535739 ROBO2Q9HCK4 1378 aa30.88■■■□□ 2.53
LTBR-205ENST00000535739 PTCH1Q13635 1447 aa30.88■■■□□ 2.53
LTBR-205ENST00000535739 SETD5Q9C0A6 1442 aa30.88■■■□□ 2.53
LTBR-205ENST00000535739 ZNF772Q68DY9 489 aaPredicted RBP30.84■■■□□ 2.53
LTBR-205ENST00000535739 LRRC59Q96AG4 307 aaKnown RBP30.83■■■□□ 2.53
LTBR-205ENST00000535739 C1orf167Q5SNV9 1468 aa30.82■■■□□ 2.53
LTBR-205ENST00000535739 CCDC144AA2RUR9 1427 aa30.8■■■□□ 2.52
LTBR-205ENST00000535739 PRAG1Q86YV5 1406 aa30.8■■■□□ 2.52
LTBR-205ENST00000535739 MPHOSPH9Q99550 1183 aa30.79■■■□□ 2.52
LTBR-205ENST00000535739 RGL3Q3MIN7 710 aa30.78■■■□□ 2.52
LTBR-205ENST00000535739 ADGRF5Q8IZF2 1346 aa30.77■■■□□ 2.52
LTBR-205ENST00000535739 ORAI2Q96SN7 254 aa30.76■■■□□ 2.51
LTBR-205ENST00000535739 PNPLA6Q8IY17 1366 aa30.76■■■□□ 2.51
LTBR-205ENST00000535739 SPATA31E1Q6ZUB1 1445 aa30.74■■■□□ 2.51
LTBR-205ENST00000535739 IFT172Q9UG01 1749 aa30.74■■■□□ 2.51
LTBR-205ENST00000535739 AFF2P51816 1311 aa30.73■■■□□ 2.51
LTBR-205ENST00000535739 LAMC1P11047 1609 aa30.73■■■□□ 2.51
LTBR-205ENST00000535739 RXRBP28702 533 aa30.7■■■□□ 2.51
LTBR-205ENST00000535739 C8orf37Q96NL8 207 aa30.68■■■□□ 2.5
LTBR-205ENST00000535739 ANKRD30BQ9BXX2 1392 aa30.67■■■□□ 2.5
LTBR-205ENST00000535739 STK26Q9P289 416 aa30.67■■■□□ 2.5
LTBR-205ENST00000535739 SOS2Q07890 1332 aaPredicted RBP30.67■■■□□ 2.5
LTBR-205ENST00000535739 CDC42BPGQ6DT37 1551 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms