RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 SLC4A1APQ9BWU0 796 aaKnown RBP21.34■■□□□ 1.01
MSRB3-206ENST00000535664 CHGAP10645 457 aaKnown RBP21.32■■□□□ 1
MSRB3-206ENST00000535664 MPHOSPH9Q99550 1183 aa21.31■■□□□ 1
MSRB3-206ENST00000535664 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
MSRB3-206ENST00000535664 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
MSRB3-206ENST00000535664 TMEM131LA2VDJ0 1609 aa21.29■■□□□ 1
MSRB3-206ENST00000535664 RIMS2Q9UQ26 1411 aa21.28■■□□□ 1
MSRB3-206ENST00000535664 BCANQ96GW7 911 aa21.27■■□□□ 1
MSRB3-206ENST00000535664 ZFYVE9O95405 1425 aa21.27■■□□□ 1
MSRB3-206ENST00000535664 SPHKAPQ2M3C7 1700 aa21.26■□□□□ 0.99
MSRB3-206ENST00000535664 PLEKHG1Q9ULL1 1385 aa21.26■□□□□ 0.99
MSRB3-206ENST00000535664 TRPM2O94759 1503 aa21.24■□□□□ 0.99
MSRB3-206ENST00000535664 TOM1O60784 492 aa21.23■□□□□ 0.99
MSRB3-206ENST00000535664 KCNA6P17658 529 aa21.22■□□□□ 0.99
MSRB3-206ENST00000535664 TBX22Q9Y458 520 aa21.22■□□□□ 0.99
MSRB3-206ENST00000535664 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
MSRB3-206ENST00000535664 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
MSRB3-206ENST00000535664 SLC26A8Q96RN1 970 aa21.2■□□□□ 0.98
MSRB3-206ENST00000535664 ANKRD30BQ9BXX2 1392 aa21.2■□□□□ 0.98
MSRB3-206ENST00000535664 FOXD1Q16676 465 aa21.18■□□□□ 0.98
MSRB3-206ENST00000535664 RPGRIP1LQ68CZ1 1315 aa21.18■□□□□ 0.98
MSRB3-206ENST00000535664 PIK3R4Q99570 1358 aa21.17■□□□□ 0.98
MSRB3-206ENST00000535664 MYO5BQ9ULV0 1848 aa21.15■□□□□ 0.98
MSRB3-206ENST00000535664 LRRC7Q96NW7 1537 aa21.15■□□□□ 0.98
MSRB3-206ENST00000535664 VGFO15240 615 aaPredicted RBP21.15■□□□□ 0.98
MSRB3-206ENST00000535664 CLTCL1P53675 1640 aa21.14■□□□□ 0.97
MSRB3-206ENST00000535664 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
MSRB3-206ENST00000535664 CCDC144AA2RUR9 1427 aa21.13■□□□□ 0.97
MSRB3-206ENST00000535664 KIF1BO60333 1816 aa21.13■□□□□ 0.97
MSRB3-206ENST00000535664 NKTRP30414 1462 aaKnown RBP21.12■□□□□ 0.97
MSRB3-206ENST00000535664 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
MSRB3-206ENST00000535664 SIN3AQ96ST3 1273 aa21.11■□□□□ 0.97
MSRB3-206ENST00000535664 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
MSRB3-206ENST00000535664 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
MSRB3-206ENST00000535664 ADAMTS13Q76LX8 1427 aa21.08■□□□□ 0.97
MSRB3-206ENST00000535664 NCOA3Q9Y6Q9 1424 aa21.08■□□□□ 0.97
MSRB3-206ENST00000535664 STRCP1A6NGW2 1772 aa21.08■□□□□ 0.96
MSRB3-206ENST00000535664 NWD1Q149M9 1564 aa21.07■□□□□ 0.96
MSRB3-206ENST00000535664 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
MSRB3-206ENST00000535664 TMEM94Q12767 1356 aa21.05■□□□□ 0.96
MSRB3-206ENST00000535664 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
MSRB3-206ENST00000535664 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
MSRB3-206ENST00000535664 CHD2O14647 1828 aaKnown RBP21.02■□□□□ 0.96
MSRB3-206ENST00000535664 PIP4K2BP78356 416 aa21.02■□□□□ 0.96
MSRB3-206ENST00000535664 MSH6P52701 1360 aa21.01■□□□□ 0.95
MSRB3-206ENST00000535664 AMOTL2Q9Y2J4 779 aa21.01■□□□□ 0.95
MSRB3-206ENST00000535664 NEUROD1Q13562 356 aa21■□□□□ 0.95
MSRB3-206ENST00000535664 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
MSRB3-206ENST00000535664 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
MSRB3-206ENST00000535664 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
MSRB3-206ENST00000535664 STAC3Q96MF2 364 aa20.97■□□□□ 0.95
MSRB3-206ENST00000535664 TIMELESSQ9UNS1 1208 aa20.97■□□□□ 0.95
MSRB3-206ENST00000535664 C14orf37Q86TY3 774 aa20.96■□□□□ 0.95
MSRB3-206ENST00000535664 C19orf44Q9H6X5 657 aa20.96■□□□□ 0.95
MSRB3-206ENST00000535664 NRXN3Q9Y4C0 1643 aa20.94■□□□□ 0.94
MSRB3-206ENST00000535664 CADPS2Q86UW7 1296 aa20.94■□□□□ 0.94
MSRB3-206ENST00000535664 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
MSRB3-206ENST00000535664 FAM135BQ49AJ0 1406 aa20.94■□□□□ 0.94
MSRB3-206ENST00000535664 METP08581 1390 aa20.93■□□□□ 0.94
MSRB3-206ENST00000535664 PPLO60437 1756 aa20.92■□□□□ 0.94
MSRB3-206ENST00000535664 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
MSRB3-206ENST00000535664 ATF3P18847 181 aa20.92■□□□□ 0.94
MSRB3-206ENST00000535664 PTPRUQ92729 1446 aa20.91■□□□□ 0.94
MSRB3-206ENST00000535664 SLAIN2Q9P270 581 aa20.91■□□□□ 0.94
MSRB3-206ENST00000535664 ALKQ9UM73 1620 aa20.9■□□□□ 0.94
MSRB3-206ENST00000535664 HSPA1LP34931 641 aa20.9■□□□□ 0.94
MSRB3-206ENST00000535664 RBM33Q96EV2 1170 aaKnown RBP20.9■□□□□ 0.94
MSRB3-206ENST00000535664 ADGRF5Q8IZF2 1346 aa20.88■□□□□ 0.93
MSRB3-206ENST00000535664 DCCP43146 1447 aa20.87■□□□□ 0.93
MSRB3-206ENST00000535664 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
MSRB3-206ENST00000535664 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
MSRB3-206ENST00000535664 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
MSRB3-206ENST00000535664 PTCH1Q13635 1447 aa20.86■□□□□ 0.93
MSRB3-206ENST00000535664 MYOM2P54296 1465 aa20.85■□□□□ 0.93
MSRB3-206ENST00000535664 PIK3C2GO75747 1445 aa20.84■□□□□ 0.93
MSRB3-206ENST00000535664 C14orf93Q9H972 538 aaKnown RBP20.83■□□□□ 0.93
MSRB3-206ENST00000535664 IFT172Q9UG01 1749 aa20.83■□□□□ 0.92
MSRB3-206ENST00000535664 SIRT1Q96EB6 747 aa20.81■□□□□ 0.92
MSRB3-206ENST00000535664 SETD1AO15047 1707 aaKnown RBP20.8■□□□□ 0.92
MSRB3-206ENST00000535664 ABCC11Q96J66 1382 aa20.8■□□□□ 0.92
MSRB3-206ENST00000535664 NRXN1Q9ULB1 1477 aa20.8■□□□□ 0.92
MSRB3-206ENST00000535664 ADGRL3Q9HAR2 1447 aa20.79■□□□□ 0.92
MSRB3-206ENST00000535664 LRPPRCP42704 1394 aaKnown RBP20.79■□□□□ 0.92
MSRB3-206ENST00000535664 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.78■□□□□ 0.92
MSRB3-206ENST00000535664 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
MSRB3-206ENST00000535664 LAMC1P11047 1609 aa20.77■□□□□ 0.92
MSRB3-206ENST00000535664 TECPR2O15040 1411 aa20.77■□□□□ 0.91
MSRB3-206ENST00000535664 ROBO2Q9HCK4 1378 aa20.76■□□□□ 0.91
MSRB3-206ENST00000535664 ROBO1Q9Y6N7 1651 aa20.75■□□□□ 0.91
MSRB3-206ENST00000535664 DISP3Q9P2K9 1392 aa20.73■□□□□ 0.91
MSRB3-206ENST00000535664 YTHDC2Q9H6S0 1430 aaKnown RBP20.73■□□□□ 0.91
MSRB3-206ENST00000535664 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
MSRB3-206ENST00000535664 CFAP70Q5T0N1 1121 aa20.73■□□□□ 0.91
MSRB3-206ENST00000535664 STK26Q9P289 416 aa20.73■□□□□ 0.91
MSRB3-206ENST00000535664 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
MSRB3-206ENST00000535664 TMEM132EQ6IEE7 984 aa20.72■□□□□ 0.91
MSRB3-206ENST00000535664 MST1RQ04912 1400 aa20.7■□□□□ 0.9
MSRB3-206ENST00000535664 BRINP3Q76B58 766 aa20.69■□□□□ 0.9
MSRB3-206ENST00000535664 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
MSRB3-206ENST00000535664 TRPM1Q7Z4N2 1603 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms