RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TIMELESSQ9UNS1 1208 aa22.49■■□□□ 1.19
CNN1-202ENST00000535659 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.48■■□□□ 1.19
CNN1-202ENST00000535659 DCAF11Q8TEB1 546 aa22.48■■□□□ 1.19
CNN1-202ENST00000535659 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
CNN1-202ENST00000535659 TONSLQ96HA7 1378 aa22.47■■□□□ 1.19
CNN1-202ENST00000535659 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
CNN1-202ENST00000535659 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
CNN1-202ENST00000535659 STAC3Q96MF2 364 aa22.47■■□□□ 1.19
CNN1-202ENST00000535659 VGFO15240 615 aaPredicted RBP22.47■■□□□ 1.19
CNN1-202ENST00000535659 RIMS2Q9UQ26 1411 aa22.46■■□□□ 1.19
CNN1-202ENST00000535659 SLIT1O75093 1534 aa22.46■■□□□ 1.19
CNN1-202ENST00000535659 LTKP29376 864 aa22.46■■□□□ 1.19
CNN1-202ENST00000535659 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
CNN1-202ENST00000535659 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
CNN1-202ENST00000535659 ARHGAP23Q9P227 1491 aa22.45■■□□□ 1.19
CNN1-202ENST00000535659 NEXMIFQ5QGS0 1516 aa22.45■■□□□ 1.18
CNN1-202ENST00000535659 ZFYVE9O95405 1425 aa22.44■■□□□ 1.18
CNN1-202ENST00000535659 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
CNN1-202ENST00000535659 IFT172Q9UG01 1749 aa22.41■■□□□ 1.18
CNN1-202ENST00000535659 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
CNN1-202ENST00000535659 PPLO60437 1756 aa22.4■■□□□ 1.18
CNN1-202ENST00000535659 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.17
CNN1-202ENST00000535659 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
CNN1-202ENST00000535659 MYOM2P54296 1465 aa22.36■■□□□ 1.17
CNN1-202ENST00000535659 BCANQ96GW7 911 aa22.36■■□□□ 1.17
CNN1-202ENST00000535659 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
CNN1-202ENST00000535659 PLEKHG1Q9ULL1 1385 aa22.34■■□□□ 1.17
CNN1-202ENST00000535659 POLR1AO95602 1720 aaPredicted RBP22.33■■□□□ 1.17
CNN1-202ENST00000535659 MED14O60244 1454 aa22.31■■□□□ 1.16
CNN1-202ENST00000535659 NRXN1Q9ULB1 1477 aa22.31■■□□□ 1.16
CNN1-202ENST00000535659 CERKQ8TCT0 537 aa22.31■■□□□ 1.16
CNN1-202ENST00000535659 NPHP4O75161 1426 aaPredicted RBP22.3■■□□□ 1.16
CNN1-202ENST00000535659 NBPF8Q3BBV2 869 aa22.3■■□□□ 1.16
CNN1-202ENST00000535659 STRCQ7RTU9 1775 aa22.29■■□□□ 1.16
CNN1-202ENST00000535659 C14orf93Q9H972 538 aaKnown RBP22.29■■□□□ 1.16
CNN1-202ENST00000535659 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
CNN1-202ENST00000535659 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
CNN1-202ENST00000535659 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
CNN1-202ENST00000535659 SLC26A8Q96RN1 970 aa22.28■■□□□ 1.16
CNN1-202ENST00000535659 PRAG1Q86YV5 1406 aa22.28■■□□□ 1.16
CNN1-202ENST00000535659 CFAP70Q5T0N1 1121 aa22.27■■□□□ 1.16
CNN1-202ENST00000535659 TBX22Q9Y458 520 aa22.27■■□□□ 1.16
CNN1-202ENST00000535659 SETBP1Q9Y6X0 1596 aa22.26■■□□□ 1.15
CNN1-202ENST00000535659 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
CNN1-202ENST00000535659 NRXN3Q9Y4C0 1643 aa22.25■■□□□ 1.15
CNN1-202ENST00000535659 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
CNN1-202ENST00000535659 ALKQ9UM73 1620 aa22.22■■□□□ 1.15
CNN1-202ENST00000535659 NBPF1Q3BBV0 1214 aa22.21■■□□□ 1.15
CNN1-202ENST00000535659 TMEM132EQ6IEE7 984 aa22.2■■□□□ 1.14
CNN1-202ENST00000535659 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
CNN1-202ENST00000535659 METP08581 1390 aa22.18■■□□□ 1.14
CNN1-202ENST00000535659 LAMC1P11047 1609 aa22.18■■□□□ 1.14
CNN1-202ENST00000535659 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
CNN1-202ENST00000535659 TRPM1Q7Z4N2 1603 aa22.17■■□□□ 1.14
CNN1-202ENST00000535659 KIAA1210Q9ULL0 1709 aa22.16■■□□□ 1.14
CNN1-202ENST00000535659 PIK3R4Q99570 1358 aa22.15■■□□□ 1.14
CNN1-202ENST00000535659 ROCK2O75116 1388 aaKnown RBP22.14■■□□□ 1.14
CNN1-202ENST00000535659 RALGAPBQ86X10 1494 aa22.14■■□□□ 1.13
CNN1-202ENST00000535659 ASXL1Q8IXJ9 1541 aa22.13■■□□□ 1.13
CNN1-202ENST00000535659 KCNA6P17658 529 aa22.12■■□□□ 1.13
CNN1-202ENST00000535659 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
CNN1-202ENST00000535659 ADGRB1O14514 1584 aa22.12■■□□□ 1.13
CNN1-202ENST00000535659 CARD11Q9BXL7 1154 aa22.11■■□□□ 1.13
CNN1-202ENST00000535659 STK26Q9P289 416 aa22.11■■□□□ 1.13
CNN1-202ENST00000535659 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
CNN1-202ENST00000535659 PTPRUQ92729 1446 aa22.09■■□□□ 1.13
CNN1-202ENST00000535659 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
CNN1-202ENST00000535659 YTHDC2Q9H6S0 1430 aaKnown RBP22.08■■□□□ 1.13
CNN1-202ENST00000535659 ABCC11Q96J66 1382 aa22.08■■□□□ 1.13
CNN1-202ENST00000535659 TRAK1Q9UPV9 953 aa22.07■■□□□ 1.12
CNN1-202ENST00000535659 SIRT1Q96EB6 747 aa22.06■■□□□ 1.12
CNN1-202ENST00000535659 ZNF335Q9H4Z2 1342 aaPredicted RBP22.05■■□□□ 1.12
CNN1-202ENST00000535659 CHD2O14647 1828 aaKnown RBP22.04■■□□□ 1.12
CNN1-202ENST00000535659 DISP3Q9P2K9 1392 aa22.03■■□□□ 1.12
CNN1-202ENST00000535659 NWD1Q149M9 1564 aa22.03■■□□□ 1.12
CNN1-202ENST00000535659 ILDR2Q71H61 639 aa22.02■■□□□ 1.12
CNN1-202ENST00000535659 XRN1Q8IZH2 1706 aaKnown RBP22.02■■□□□ 1.12
CNN1-202ENST00000535659 TECPR2O15040 1411 aa22.01■■□□□ 1.11
CNN1-202ENST00000535659 PROSER2Q86WR7 435 aaPredicted RBP22.01■■□□□ 1.11
CNN1-202ENST00000535659 KNDC1Q76NI1 1749 aa22■■□□□ 1.11
CNN1-202ENST00000535659 WAPLQ7Z5K2 1190 aa22■■□□□ 1.11
CNN1-202ENST00000535659 POGKQ9P215 609 aa22■■□□□ 1.11
CNN1-202ENST00000535659 ROBO2Q9HCK4 1378 aa21.99■■□□□ 1.11
CNN1-202ENST00000535659 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
CNN1-202ENST00000535659 PRAM1Q96QH2 718 aa21.99■■□□□ 1.11
CNN1-202ENST00000535659 PTCH1Q13635 1447 aa21.98■■□□□ 1.11
CNN1-202ENST00000535659 CPS1P31327 1500 aa21.98■■□□□ 1.11
CNN1-202ENST00000535659 DLC1Q96QB1 1528 aa21.98■■□□□ 1.11
CNN1-202ENST00000535659 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
CNN1-202ENST00000535659 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
CNN1-202ENST00000535659 NKTRP30414 1462 aaKnown RBP21.97■■□□□ 1.11
CNN1-202ENST00000535659 EIF3AQ14152 1382 aaKnown RBP21.96■■□□□ 1.11
CNN1-202ENST00000535659 USP47Q96K76 1375 aa21.96■■□□□ 1.11
CNN1-202ENST00000535659 ARHGEF28Q8N1W1 1705 aaKnown RBP21.95■■□□□ 1.1
CNN1-202ENST00000535659 ST20-MTHFSA0A0A6YYL1 179 aa21.95■■□□□ 1.1
CNN1-202ENST00000535659 RBM33Q96EV2 1170 aaKnown RBP21.95■■□□□ 1.1
CNN1-202ENST00000535659 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
CNN1-202ENST00000535659 SOCS7O14512 581 aa21.94■■□□□ 1.1
CNN1-202ENST00000535659 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
CNN1-202ENST00000535659 PLEKHH1Q9ULM0 1364 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms