RNA–Protein interactions for RNA: ENST00000535462.5

PTPN6-206, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-206ENST00000535462 ZFYVE9O95405 1425 aa24.41■■□□□ 1.5
PTPN6-206ENST00000535462 PLEKHG1Q9ULL1 1385 aa24.41■■□□□ 1.5
PTPN6-206ENST00000535462 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
PTPN6-206ENST00000535462 TMEM131LA2VDJ0 1609 aa24.39■■□□□ 1.49
PTPN6-206ENST00000535462 SLC26A8Q96RN1 970 aa24.38■■□□□ 1.49
PTPN6-206ENST00000535462 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
PTPN6-206ENST00000535462 ROBO1Q9Y6N7 1651 aa24.37■■□□□ 1.49
PTPN6-206ENST00000535462 PROSER2Q86WR7 435 aaPredicted RBP24.37■■□□□ 1.49
PTPN6-206ENST00000535462 NCOA3Q9Y6Q9 1424 aa24.36■■□□□ 1.49
PTPN6-206ENST00000535462 MYO5BQ9ULV0 1848 aa24.36■■□□□ 1.49
PTPN6-206ENST00000535462 MSH6P52701 1360 aa24.36■■□□□ 1.49
PTPN6-206ENST00000535462 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.35■■□□□ 1.49
PTPN6-206ENST00000535462 DIP2AQ14689 1571 aa24.34■■□□□ 1.49
PTPN6-206ENST00000535462 IQGAP3Q86VI3 1631 aa24.34■■□□□ 1.49
PTPN6-206ENST00000535462 RIMS2Q9UQ26 1411 aa24.34■■□□□ 1.49
PTPN6-206ENST00000535462 E9PCH4 1651 aa24.31■■□□□ 1.48
PTPN6-206ENST00000535462 PPP1R15AO75807 674 aaPredicted RBP24.31■■□□□ 1.48
PTPN6-206ENST00000535462 BCANQ96GW7 911 aa24.31■■□□□ 1.48
PTPN6-206ENST00000535462 TBX22Q9Y458 520 aa24.31■■□□□ 1.48
PTPN6-206ENST00000535462 PIK3R4Q99570 1358 aa24.3■■□□□ 1.48
PTPN6-206ENST00000535462 SENP3Q9H4L4 574 aaPredicted RBP24.29■■□□□ 1.48
PTPN6-206ENST00000535462 SLAIN2Q9P270 581 aa24.25■■□□□ 1.47
PTPN6-206ENST00000535462 RGS17Q9UGC6 210 aaPredicted RBP24.24■■□□□ 1.47
PTPN6-206ENST00000535462 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
PTPN6-206ENST00000535462 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
PTPN6-206ENST00000535462 JCADQ9P266 1359 aa24.21■■□□□ 1.47
PTPN6-206ENST00000535462 TRPM2O94759 1503 aa24.2■■□□□ 1.47
PTPN6-206ENST00000535462 NUP155O75694 1391 aa24.19■■□□□ 1.46
PTPN6-206ENST00000535462 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
PTPN6-206ENST00000535462 CADPS2Q86UW7 1296 aa24.18■■□□□ 1.46
PTPN6-206ENST00000535462 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
PTPN6-206ENST00000535462 COL16A1Q07092 1604 aaPredicted RBP24.17■■□□□ 1.46
PTPN6-206ENST00000535462 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
PTPN6-206ENST00000535462 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
PTPN6-206ENST00000535462 DCCP43146 1447 aa24.15■■□□□ 1.46
PTPN6-206ENST00000535462 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
PTPN6-206ENST00000535462 AHDC1Q5TGY3 1603 aaPredicted RBP24.14■■□□□ 1.46
PTPN6-206ENST00000535462 SETBP1Q9Y6X0 1596 aa24.13■■□□□ 1.45
PTPN6-206ENST00000535462 SPATA31A6Q5VVP1 1343 aa24.12■■□□□ 1.45
PTPN6-206ENST00000535462 C14orf37Q86TY3 774 aa24.11■■□□□ 1.45
PTPN6-206ENST00000535462 ATF3P18847 181 aa24.1■■□□□ 1.45
PTPN6-206ENST00000535462 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
PTPN6-206ENST00000535462 POTEAQ6S8J7 498 aa24.09■■□□□ 1.45
PTPN6-206ENST00000535462 XRN1Q8IZH2 1706 aaKnown RBP24.09■■□□□ 1.45
PTPN6-206ENST00000535462 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
PTPN6-206ENST00000535462 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
PTPN6-206ENST00000535462 PTPRUQ92729 1446 aa24.04■■□□□ 1.44
PTPN6-206ENST00000535462 NUTM2DQ5VT03 806 aaPredicted RBP24.04■■□□□ 1.44
PTPN6-206ENST00000535462 ITGAEP38570 1179 aa24.01■■□□□ 1.43
PTPN6-206ENST00000535462 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
PTPN6-206ENST00000535462 ZNF772Q68DY9 489 aaPredicted RBP24■■□□□ 1.43
PTPN6-206ENST00000535462 KIF1BO60333 1816 aa24■■□□□ 1.43
PTPN6-206ENST00000535462 NEXMIFQ5QGS0 1516 aa23.98■■□□□ 1.43
PTPN6-206ENST00000535462 LRP6O75581 1613 aa23.98■■□□□ 1.43
PTPN6-206ENST00000535462 CLTCL1P53675 1640 aa23.97■■□□□ 1.43
PTPN6-206ENST00000535462 ZNF326Q5BKZ1 582 aaKnown RBP23.97■■□□□ 1.43
PTPN6-206ENST00000535462 NHSL1Q5SYE7 1610 aa23.97■■□□□ 1.43
PTPN6-206ENST00000535462 BRINP3Q76B58 766 aa23.97■■□□□ 1.43
PTPN6-206ENST00000535462 ASXL1Q8IXJ9 1541 aa23.97■■□□□ 1.43
PTPN6-206ENST00000535462 SETD5Q9C0A6 1442 aa23.96■■□□□ 1.43
PTPN6-206ENST00000535462 MST1RQ04912 1400 aa23.95■■□□□ 1.42
PTPN6-206ENST00000535462 ADGRL3Q9HAR2 1447 aa23.95■■□□□ 1.42
PTPN6-206ENST00000535462 MEX3CQ5U5Q3 659 aaKnown RBP23.94■■□□□ 1.42
PTPN6-206ENST00000535462 NAIPQ13075 1403 aa23.93■■□□□ 1.42
PTPN6-206ENST00000535462 METP08581 1390 aa23.92■■□□□ 1.42
PTPN6-206ENST00000535462 PRAG1Q86YV5 1406 aa23.92■■□□□ 1.42
PTPN6-206ENST00000535462 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
PTPN6-206ENST00000535462 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
PTPN6-206ENST00000535462 CDK12Q9NYV4 1490 aaPredicted RBP23.9■■□□□ 1.42
PTPN6-206ENST00000535462 NALCNQ8IZF0 1738 aa23.9■■□□□ 1.42
PTPN6-206ENST00000535462 LRRC59Q96AG4 307 aaKnown RBP23.89■■□□□ 1.41
PTPN6-206ENST00000535462 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
PTPN6-206ENST00000535462 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
PTPN6-206ENST00000535462 RPGRIP1LQ68CZ1 1315 aa23.87■■□□□ 1.41
PTPN6-206ENST00000535462 LAMC1P11047 1609 aa23.87■■□□□ 1.41
PTPN6-206ENST00000535462 RXRBP28702 533 aa23.81■■□□□ 1.4
PTPN6-206ENST00000535462 PPARGC1BQ86YN6 1023 aaKnown RBP23.8■■□□□ 1.4
PTPN6-206ENST00000535462 PPLO60437 1756 aa23.8■■□□□ 1.4
PTPN6-206ENST00000535462 C1orf167Q5SNV9 1468 aa23.8■■□□□ 1.4
PTPN6-206ENST00000535462 PNPLA6Q8IY17 1366 aa23.78■■□□□ 1.4
PTPN6-206ENST00000535462 NUTM2BA6NNL0 878 aaPredicted RBP23.76■■□□□ 1.39
PTPN6-206ENST00000535462 NUTM2EB1AL46 878 aaPredicted RBP23.76■■□□□ 1.39
PTPN6-206ENST00000535462 NUTM2AQ8IVF1 878 aaPredicted RBP23.76■■□□□ 1.39
PTPN6-206ENST00000535462 SLC4A1APQ9BWU0 796 aaKnown RBP23.76■■□□□ 1.39
PTPN6-206ENST00000535462 AFF2P51816 1311 aa23.76■■□□□ 1.39
PTPN6-206ENST00000535462 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
PTPN6-206ENST00000535462 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.39
PTPN6-206ENST00000535462 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
PTPN6-206ENST00000535462 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
PTPN6-206ENST00000535462 CDC42BPGQ6DT37 1551 aa23.72■■□□□ 1.39
PTPN6-206ENST00000535462 ACIN1Q9UKV3 1341 aaKnown RBP23.71■■□□□ 1.39
PTPN6-206ENST00000535462 RBM6P78332 1123 aaKnown RBP23.7■■□□□ 1.38
PTPN6-206ENST00000535462 COL22A1Q8NFW1 1626 aaPredicted RBP23.69■■□□□ 1.38
PTPN6-206ENST00000535462 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
PTPN6-206ENST00000535462 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
PTPN6-206ENST00000535462 TECPR2O15040 1411 aa23.67■■□□□ 1.38
PTPN6-206ENST00000535462 ANKRD30BQ9BXX2 1392 aa23.67■■□□□ 1.38
PTPN6-206ENST00000535462 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
PTPN6-206ENST00000535462 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
PTPN6-206ENST00000535462 QTRT2Q9H974 415 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 377.7 ms