RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RIMS2Q9UQ26 1411 aa12.95□□□□□ -0.34
SFSWAP-202ENST00000535202 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
SFSWAP-202ENST00000535202 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
SFSWAP-202ENST00000535202 XIRP1Q702N8 1843 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-202ENST00000535202 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
SFSWAP-202ENST00000535202 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-202ENST00000535202 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
SFSWAP-202ENST00000535202 HSPA1LP34931 641 aa12.92□□□□□ -0.34
SFSWAP-202ENST00000535202 NAIPQ13075 1403 aa12.92□□□□□ -0.34
SFSWAP-202ENST00000535202 HDGFP51858 240 aaKnown RBP12.91□□□□□ -0.34
SFSWAP-202ENST00000535202 PLEKHG1Q9ULL1 1385 aa12.91□□□□□ -0.34
SFSWAP-202ENST00000535202 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
SFSWAP-202ENST00000535202 KCNA6P17658 529 aa12.9□□□□□ -0.34
SFSWAP-202ENST00000535202 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
SFSWAP-202ENST00000535202 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
SFSWAP-202ENST00000535202 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
SFSWAP-202ENST00000535202 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
SFSWAP-202ENST00000535202 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
SFSWAP-202ENST00000535202 HFM1A2PYH4 1435 aa12.88□□□□□ -0.35
SFSWAP-202ENST00000535202 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
SFSWAP-202ENST00000535202 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
SFSWAP-202ENST00000535202 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
SFSWAP-202ENST00000535202 CLTCL1P53675 1640 aa12.86□□□□□ -0.35
SFSWAP-202ENST00000535202 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
SFSWAP-202ENST00000535202 TRPM2O94759 1503 aa12.85□□□□□ -0.35
SFSWAP-202ENST00000535202 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
SFSWAP-202ENST00000535202 ADAMTS13Q76LX8 1427 aa12.85□□□□□ -0.35
SFSWAP-202ENST00000535202 KIF1BO60333 1816 aa12.84□□□□□ -0.35
SFSWAP-202ENST00000535202 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
SFSWAP-202ENST00000535202 MED1Q15648 1581 aaPredicted RBP12.84□□□□□ -0.35
SFSWAP-202ENST00000535202 MYT1Q01538 1121 aa12.83□□□□□ -0.36
SFSWAP-202ENST00000535202 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
SFSWAP-202ENST00000535202 MSH6P52701 1360 aa12.82□□□□□ -0.36
SFSWAP-202ENST00000535202 NRXN3Q9Y4C0 1643 aa12.81□□□□□ -0.36
SFSWAP-202ENST00000535202 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-202ENST00000535202 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
SFSWAP-202ENST00000535202 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
SFSWAP-202ENST00000535202 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
SFSWAP-202ENST00000535202 PIK3R4Q99570 1358 aa12.8□□□□□ -0.36
SFSWAP-202ENST00000535202 FAM135BQ49AJ0 1406 aa12.79□□□□□ -0.36
SFSWAP-202ENST00000535202 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
SFSWAP-202ENST00000535202 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
SFSWAP-202ENST00000535202 XRN1Q8IZH2 1706 aaKnown RBP12.76□□□□□ -0.37
SFSWAP-202ENST00000535202 FOXD1Q16676 465 aa12.76□□□□□ -0.37
SFSWAP-202ENST00000535202 PHF23Q9BUL5 403 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-202ENST00000535202 AMOTL2Q9Y2J4 779 aa12.76□□□□□ -0.37
SFSWAP-202ENST00000535202 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
SFSWAP-202ENST00000535202 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
SFSWAP-202ENST00000535202 METP08581 1390 aa12.74□□□□□ -0.37
SFSWAP-202ENST00000535202 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
SFSWAP-202ENST00000535202 PPLO60437 1756 aa12.74□□□□□ -0.37
SFSWAP-202ENST00000535202 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
SFSWAP-202ENST00000535202 SOCS7O14512 581 aa12.72□□□□□ -0.37
SFSWAP-202ENST00000535202 ATF3P18847 181 aa12.72□□□□□ -0.37
SFSWAP-202ENST00000535202 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
SFSWAP-202ENST00000535202 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
SFSWAP-202ENST00000535202 CCDC144AA2RUR9 1427 aa12.71□□□□□ -0.37
SFSWAP-202ENST00000535202 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
SFSWAP-202ENST00000535202 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
SFSWAP-202ENST00000535202 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
SFSWAP-202ENST00000535202 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
SFSWAP-202ENST00000535202 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
SFSWAP-202ENST00000535202 HRCP23327 699 aa12.7□□□□□ -0.38
SFSWAP-202ENST00000535202 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
SFSWAP-202ENST00000535202 COL16A1Q07092 1604 aaPredicted RBP12.68□□□□□ -0.38
SFSWAP-202ENST00000535202 DCCP43146 1447 aa12.68□□□□□ -0.38
SFSWAP-202ENST00000535202 RGL3Q3MIN7 710 aa12.67□□□□□ -0.38
SFSWAP-202ENST00000535202 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
SFSWAP-202ENST00000535202 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
SFSWAP-202ENST00000535202 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-202ENST00000535202 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
SFSWAP-202ENST00000535202 SPATA31E1Q6ZUB1 1445 aa12.66□□□□□ -0.38
SFSWAP-202ENST00000535202 ADGRL3Q9HAR2 1447 aa12.66□□□□□ -0.38
SFSWAP-202ENST00000535202 JCADQ9P266 1359 aa12.66□□□□□ -0.38
SFSWAP-202ENST00000535202 MST1RQ04912 1400 aa12.65□□□□□ -0.38
SFSWAP-202ENST00000535202 PTCH1Q13635 1447 aa12.65□□□□□ -0.38
SFSWAP-202ENST00000535202 ADGRF5Q8IZF2 1346 aa12.64□□□□□ -0.39
SFSWAP-202ENST00000535202 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
SFSWAP-202ENST00000535202 BRINP3Q76B58 766 aa12.64□□□□□ -0.39
SFSWAP-202ENST00000535202 ROBO2Q9HCK4 1378 aa12.64□□□□□ -0.39
SFSWAP-202ENST00000535202 SHPRHQ149N8 1683 aa12.62□□□□□ -0.39
SFSWAP-202ENST00000535202 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
SFSWAP-202ENST00000535202 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-202ENST00000535202 NHSL1Q5SYE7 1610 aa12.62□□□□□ -0.39
SFSWAP-202ENST00000535202 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
SFSWAP-202ENST00000535202 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
SFSWAP-202ENST00000535202 STK26Q9P289 416 aa12.59□□□□□ -0.39
SFSWAP-202ENST00000535202 KNDC1Q76NI1 1749 aa12.59□□□□□ -0.39
SFSWAP-202ENST00000535202 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
SFSWAP-202ENST00000535202 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
SFSWAP-202ENST00000535202 LRP6O75581 1613 aa12.59□□□□□ -0.39
SFSWAP-202ENST00000535202 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
SFSWAP-202ENST00000535202 TMEM132EQ6IEE7 984 aa12.57□□□□□ -0.4
SFSWAP-202ENST00000535202 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-202ENST00000535202 MYOM2P54296 1465 aa12.57□□□□□ -0.4
SFSWAP-202ENST00000535202 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-202ENST00000535202 CDC42BPGQ6DT37 1551 aa12.56□□□□□ -0.4
SFSWAP-202ENST00000535202 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
SFSWAP-202ENST00000535202 LAMC1P11047 1609 aa12.55□□□□□ -0.4
SFSWAP-202ENST00000535202 TECPR2O15040 1411 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms