RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 NKTRP30414 1462 aaKnown RBP26.74■■□□□ 1.87
MSRB3-204ENST00000535143 GCC2Q8IWJ2 1684 aa26.72■■□□□ 1.87
MSRB3-204ENST00000535143 SETD1AO15047 1707 aaKnown RBP26.71■■□□□ 1.87
MSRB3-204ENST00000535143 PHLPP1O60346 1717 aa26.7■■□□□ 1.87
MSRB3-204ENST00000535143 MSH6P52701 1360 aa26.69■■□□□ 1.86
MSRB3-204ENST00000535143 ADGRL2O95490 1459 aa26.68■■□□□ 1.86
MSRB3-204ENST00000535143 CHD2O14647 1828 aaKnown RBP26.67■■□□□ 1.86
MSRB3-204ENST00000535143 ZFYVE9O95405 1425 aa26.66■■□□□ 1.86
MSRB3-204ENST00000535143 SLC52A1Q9NWF4 448 aa26.66■■□□□ 1.86
MSRB3-204ENST00000535143 FAM50AQ14320 339 aaKnown RBP26.64■■□□□ 1.86
MSRB3-204ENST00000535143 RIMS2Q9UQ26 1411 aa26.64■■□□□ 1.85
MSRB3-204ENST00000535143 PLEKHG1Q9ULL1 1385 aa26.63■■□□□ 1.85
MSRB3-204ENST00000535143 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
MSRB3-204ENST00000535143 ANKRD50Q9ULJ7 1429 aa26.63■■□□□ 1.85
MSRB3-204ENST00000535143 RPRD2Q5VT52 1461 aaKnown RBP26.62■■□□□ 1.85
MSRB3-204ENST00000535143 TMEM131LA2VDJ0 1609 aa26.62■■□□□ 1.85
MSRB3-204ENST00000535143 SLAIN2Q9P270 581 aa26.62■■□□□ 1.85
MSRB3-204ENST00000535143 COL16A1Q07092 1604 aaPredicted RBP26.6■■□□□ 1.85
MSRB3-204ENST00000535143 JCADQ9P266 1359 aa26.58■■□□□ 1.85
MSRB3-204ENST00000535143 NUTM2DQ5VT03 806 aaPredicted RBP26.58■■□□□ 1.85
MSRB3-204ENST00000535143 CHGAP10645 457 aaKnown RBP26.57■■□□□ 1.84
MSRB3-204ENST00000535143 UNC13BO14795 1591 aa26.54■■□□□ 1.84
MSRB3-204ENST00000535143 LRP6O75581 1613 aa26.54■■□□□ 1.84
MSRB3-204ENST00000535143 E9PCH4 1651 aa26.54■■□□□ 1.84
MSRB3-204ENST00000535143 C14orf37Q86TY3 774 aa26.54■■□□□ 1.84
MSRB3-204ENST00000535143 ADAMTS13Q76LX8 1427 aa26.52■■□□□ 1.84
MSRB3-204ENST00000535143 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.51■■□□□ 1.83
MSRB3-204ENST00000535143 HDGFP51858 240 aaKnown RBP26.49■■□□□ 1.83
MSRB3-204ENST00000535143 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
MSRB3-204ENST00000535143 DIP2AQ14689 1571 aa26.46■■□□□ 1.83
MSRB3-204ENST00000535143 AHDC1Q5TGY3 1603 aaPredicted RBP26.46■■□□□ 1.83
MSRB3-204ENST00000535143 MEX3CQ5U5Q3 659 aaKnown RBP26.45■■□□□ 1.82
MSRB3-204ENST00000535143 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.45■■□□□ 1.82
MSRB3-204ENST00000535143 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
MSRB3-204ENST00000535143 SHPRHQ149N8 1683 aa26.44■■□□□ 1.82
MSRB3-204ENST00000535143 IQGAP3Q86VI3 1631 aa26.43■■□□□ 1.82
MSRB3-204ENST00000535143 SPATA31A6Q5VVP1 1343 aa26.41■■□□□ 1.82
MSRB3-204ENST00000535143 PTPRUQ92729 1446 aa26.41■■□□□ 1.82
MSRB3-204ENST00000535143 TRPM2O94759 1503 aa26.41■■□□□ 1.82
MSRB3-204ENST00000535143 ATF3P18847 181 aa26.41■■□□□ 1.82
MSRB3-204ENST00000535143 TRIM52Q96A61 297 aa26.41■■□□□ 1.82
MSRB3-204ENST00000535143 CADPS2Q86UW7 1296 aa26.4■■□□□ 1.82
MSRB3-204ENST00000535143 C19orf44Q9H6X5 657 aa26.39■■□□□ 1.82
MSRB3-204ENST00000535143 PIK3R4Q99570 1358 aa26.38■■□□□ 1.81
MSRB3-204ENST00000535143 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
MSRB3-204ENST00000535143 NRXN3Q9Y4C0 1643 aa26.36■■□□□ 1.81
MSRB3-204ENST00000535143 ZNF772Q68DY9 489 aaPredicted RBP26.35■■□□□ 1.81
MSRB3-204ENST00000535143 BRINP3Q76B58 766 aa26.35■■□□□ 1.81
MSRB3-204ENST00000535143 NUP155O75694 1391 aa26.34■■□□□ 1.81
MSRB3-204ENST00000535143 NUTM2BA6NNL0 878 aaPredicted RBP26.34■■□□□ 1.81
MSRB3-204ENST00000535143 NUTM2EB1AL46 878 aaPredicted RBP26.34■■□□□ 1.81
MSRB3-204ENST00000535143 NUTM2AQ8IVF1 878 aaPredicted RBP26.34■■□□□ 1.81
MSRB3-204ENST00000535143 XRN1Q8IZH2 1706 aaKnown RBP26.34■■□□□ 1.81
MSRB3-204ENST00000535143 ASXL1Q8IXJ9 1541 aa26.33■■□□□ 1.81
MSRB3-204ENST00000535143 ROCK1Q13464 1354 aa26.33■■□□□ 1.8
MSRB3-204ENST00000535143 UPF1Q92900 1129 aaKnown RBP eCLIP26.32■■□□□ 1.8
MSRB3-204ENST00000535143 ITGAEP38570 1179 aa26.31■■□□□ 1.8
MSRB3-204ENST00000535143 SPHKAPQ2M3C7 1700 aa26.3■■□□□ 1.8
MSRB3-204ENST00000535143 SETBP1Q9Y6X0 1596 aa26.28■■□□□ 1.8
MSRB3-204ENST00000535143 NHSL1Q5SYE7 1610 aa26.28■■□□□ 1.8
MSRB3-204ENST00000535143 DCCP43146 1447 aa26.27■■□□□ 1.8
MSRB3-204ENST00000535143 MST1RQ04912 1400 aa26.27■■□□□ 1.8
MSRB3-204ENST00000535143 RXRBP28702 533 aa26.25■■□□□ 1.79
MSRB3-204ENST00000535143 AFF2P51816 1311 aa26.24■■□□□ 1.79
MSRB3-204ENST00000535143 ZNF326Q5BKZ1 582 aaKnown RBP26.24■■□□□ 1.79
MSRB3-204ENST00000535143 METP08581 1390 aa26.23■■□□□ 1.79
MSRB3-204ENST00000535143 DDX17Q92841 729 aaKnown RBP26.23■■□□□ 1.79
MSRB3-204ENST00000535143 NALCNQ8IZF0 1738 aa26.22■■□□□ 1.79
MSRB3-204ENST00000535143 SETD5Q9C0A6 1442 aa26.22■■□□□ 1.79
MSRB3-204ENST00000535143 CLTCL1P53675 1640 aa26.18■■□□□ 1.78
MSRB3-204ENST00000535143 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
MSRB3-204ENST00000535143 ADGRL3Q9HAR2 1447 aa26.18■■□□□ 1.78
MSRB3-204ENST00000535143 CDK12Q9NYV4 1490 aaPredicted RBP26.17■■□□□ 1.78
MSRB3-204ENST00000535143 C8orf37Q96NL8 207 aa26.17■■□□□ 1.78
MSRB3-204ENST00000535143 NEXMIFQ5QGS0 1516 aa26.17■■□□□ 1.78
MSRB3-204ENST00000535143 PNPLA6Q8IY17 1366 aa26.16■■□□□ 1.78
MSRB3-204ENST00000535143 RGS12O14924 1447 aa26.15■■□□□ 1.78
MSRB3-204ENST00000535143 LRRC59Q96AG4 307 aaKnown RBP26.13■■□□□ 1.77
MSRB3-204ENST00000535143 KIF1BO60333 1816 aa26.1■■□□□ 1.77
MSRB3-204ENST00000535143 ADAMTS2O95450 1211 aa26.08■■□□□ 1.77
MSRB3-204ENST00000535143 QTRT2Q9H974 415 aaKnown RBP26.08■■□□□ 1.77
MSRB3-204ENST00000535143 C1orf167Q5SNV9 1468 aa26.08■■□□□ 1.77
MSRB3-204ENST00000535143 RBM6P78332 1123 aaKnown RBP26.05■■□□□ 1.76
MSRB3-204ENST00000535143 ROBO2Q9HCK4 1378 aa26.03■■□□□ 1.76
MSRB3-204ENST00000535143 NGLY1Q96IV0 654 aa26.02■■□□□ 1.76
MSRB3-204ENST00000535143 ORAI2Q96SN7 254 aa26.02■■□□□ 1.76
MSRB3-204ENST00000535143 PTCH1Q13635 1447 aa26.02■■□□□ 1.76
MSRB3-204ENST00000535143 LAMC1P11047 1609 aa26.02■■□□□ 1.76
MSRB3-204ENST00000535143 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
MSRB3-204ENST00000535143 USP21Q9UK80 565 aa25.95■■□□□ 1.74
MSRB3-204ENST00000535143 NAIPQ13075 1403 aa25.95■■□□□ 1.74
MSRB3-204ENST00000535143 PPLO60437 1756 aa25.93■■□□□ 1.74
MSRB3-204ENST00000535143 COL22A1Q8NFW1 1626 aaPredicted RBP25.91■■□□□ 1.74
MSRB3-204ENST00000535143 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
MSRB3-204ENST00000535143 SRCAPQ6ZRS2 3230 aa25.9■■□□□ 1.74
MSRB3-204ENST00000535143 ATAD2Q6PL18 1390 aa25.9■■□□□ 1.74
MSRB3-204ENST00000535143 TRPC5Q9UL62 973 aaPredicted RBP25.89■■□□□ 1.74
MSRB3-204ENST00000535143 PRAG1Q86YV5 1406 aa25.88■■□□□ 1.73
MSRB3-204ENST00000535143 HFM1A2PYH4 1435 aa25.88■■□□□ 1.73
MSRB3-204ENST00000535143 ATRNO75882 1429 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms