RNA–Protein interactions for RNA: ENST00000535140.1

OTUB1-205, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-205ENST00000535140 RBM33Q96EV2 1170 aaKnown RBP28.5■■■□□ 2.15
OTUB1-205ENST00000535140 PROSER2Q86WR7 435 aaPredicted RBP28.48■■■□□ 2.15
OTUB1-205ENST00000535140 NWD1Q149M9 1564 aa28.48■■■□□ 2.15
OTUB1-205ENST00000535140 ZFYVE9O95405 1425 aa28.46■■■□□ 2.15
OTUB1-205ENST00000535140 NKTRP30414 1462 aaKnown RBP28.46■■■□□ 2.15
OTUB1-205ENST00000535140 RIMS2Q9UQ26 1411 aa28.44■■■□□ 2.14
OTUB1-205ENST00000535140 TMEM131LA2VDJ0 1609 aa28.44■■■□□ 2.14
OTUB1-205ENST00000535140 PPP1R15AO75807 674 aaPredicted RBP28.44■■■□□ 2.14
OTUB1-205ENST00000535140 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
OTUB1-205ENST00000535140 E9PCH4 1651 aa28.43■■■□□ 2.14
OTUB1-205ENST00000535140 ROBO1Q9Y6N7 1651 aa28.42■■■□□ 2.14
OTUB1-205ENST00000535140 PLEKHG1Q9ULL1 1385 aa28.41■■■□□ 2.14
OTUB1-205ENST00000535140 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
OTUB1-205ENST00000535140 ROCK1Q13464 1354 aa28.4■■■□□ 2.14
OTUB1-205ENST00000535140 IQGAP3Q86VI3 1631 aa28.39■■■□□ 2.13
OTUB1-205ENST00000535140 ITGAEP38570 1179 aa28.38■■■□□ 2.13
OTUB1-205ENST00000535140 MSH6P52701 1360 aa28.36■■■□□ 2.13
OTUB1-205ENST00000535140 CHD2O14647 1828 aaKnown RBP28.35■■■□□ 2.13
OTUB1-205ENST00000535140 HDGFP51858 240 aaKnown RBP28.35■■■□□ 2.13
OTUB1-205ENST00000535140 PPARGC1BQ86YN6 1023 aaKnown RBP28.35■■■□□ 2.13
OTUB1-205ENST00000535140 NUTM2DQ5VT03 806 aaPredicted RBP28.34■■■□□ 2.13
OTUB1-205ENST00000535140 NUP155O75694 1391 aa28.32■■■□□ 2.12
OTUB1-205ENST00000535140 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.3■■■□□ 2.12
OTUB1-205ENST00000535140 RGS17Q9UGC6 210 aaPredicted RBP28.3■■■□□ 2.12
OTUB1-205ENST00000535140 ADAMTS13Q76LX8 1427 aa28.28■■■□□ 2.12
OTUB1-205ENST00000535140 TBX22Q9Y458 520 aa28.28■■■□□ 2.12
OTUB1-205ENST00000535140 SLAIN2Q9P270 581 aa28.26■■■□□ 2.11
OTUB1-205ENST00000535140 DIP2AQ14689 1571 aa28.25■■■□□ 2.11
OTUB1-205ENST00000535140 PHLPP1O60346 1717 aa28.25■■■□□ 2.11
OTUB1-205ENST00000535140 C14orf37Q86TY3 774 aa28.23■■■□□ 2.11
OTUB1-205ENST00000535140 SPHKAPQ2M3C7 1700 aa28.19■■■□□ 2.1
OTUB1-205ENST00000535140 TRPM2O94759 1503 aa28.18■■■□□ 2.1
OTUB1-205ENST00000535140 NCOA3Q9Y6Q9 1424 aa28.18■■■□□ 2.1
OTUB1-205ENST00000535140 PIK3R4Q99570 1358 aa28.17■■■□□ 2.1
OTUB1-205ENST00000535140 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.16■■■□□ 2.1
OTUB1-205ENST00000535140 POTEAQ6S8J7 498 aa28.15■■■□□ 2.1
OTUB1-205ENST00000535140 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.1
OTUB1-205ENST00000535140 JCADQ9P266 1359 aa28.14■■■□□ 2.1
OTUB1-205ENST00000535140 PTPRUQ92729 1446 aa28.14■■■□□ 2.1
OTUB1-205ENST00000535140 NRXN3Q9Y4C0 1643 aa28.13■■■□□ 2.09
OTUB1-205ENST00000535140 AMOTL2Q9Y2J4 779 aa28.12■■■□□ 2.09
OTUB1-205ENST00000535140 ZNF326Q5BKZ1 582 aaKnown RBP28.11■■■□□ 2.09
OTUB1-205ENST00000535140 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
OTUB1-205ENST00000535140 ATF3P18847 181 aa28.1■■■□□ 2.09
OTUB1-205ENST00000535140 CADPS2Q86UW7 1296 aa28.1■■■□□ 2.09
OTUB1-205ENST00000535140 SETBP1Q9Y6X0 1596 aa28.09■■■□□ 2.09
OTUB1-205ENST00000535140 XRN1Q8IZH2 1706 aaKnown RBP28.08■■■□□ 2.09
OTUB1-205ENST00000535140 CLTCL1P53675 1640 aa28.07■■■□□ 2.08
OTUB1-205ENST00000535140 RRBP1Q9P2E9 1410 aaKnown RBP28.06■■■□□ 2.08
OTUB1-205ENST00000535140 AHDC1Q5TGY3 1603 aaPredicted RBP28.05■■■□□ 2.08
OTUB1-205ENST00000535140 LRP6O75581 1613 aa28.03■■■□□ 2.08
OTUB1-205ENST00000535140 NAIPQ13075 1403 aa28.02■■■□□ 2.08
OTUB1-205ENST00000535140 METP08581 1390 aa28.02■■■□□ 2.08
OTUB1-205ENST00000535140 NEXMIFQ5QGS0 1516 aa28.02■■■□□ 2.08
OTUB1-205ENST00000535140 DCCP43146 1447 aa28■■■□□ 2.07
OTUB1-205ENST00000535140 BRINP3Q76B58 766 aa27.99■■■□□ 2.07
OTUB1-205ENST00000535140 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
OTUB1-205ENST00000535140 SPATA31A6Q5VVP1 1343 aa27.98■■■□□ 2.07
OTUB1-205ENST00000535140 SHPRHQ149N8 1683 aa27.98■■■□□ 2.07
OTUB1-205ENST00000535140 KIF1BO60333 1816 aa27.97■■■□□ 2.07
OTUB1-205ENST00000535140 MEX3CQ5U5Q3 659 aaKnown RBP27.97■■■□□ 2.07
OTUB1-205ENST00000535140 ASXL1Q8IXJ9 1541 aa27.96■■■□□ 2.07
OTUB1-205ENST00000535140 MST1RQ04912 1400 aa27.94■■■□□ 2.06
OTUB1-205ENST00000535140 TRIM52Q96A61 297 aa27.93■■■□□ 2.06
OTUB1-205ENST00000535140 ADGRL3Q9HAR2 1447 aa27.92■■■□□ 2.06
OTUB1-205ENST00000535140 NALCNQ8IZF0 1738 aa27.91■■■□□ 2.06
OTUB1-205ENST00000535140 HFM1A2PYH4 1435 aa27.9■■■□□ 2.06
OTUB1-205ENST00000535140 NHSL1Q5SYE7 1610 aa27.89■■■□□ 2.05
OTUB1-205ENST00000535140 NUTM2BA6NNL0 878 aaPredicted RBP27.88■■■□□ 2.05
OTUB1-205ENST00000535140 NUTM2EB1AL46 878 aaPredicted RBP27.88■■■□□ 2.05
OTUB1-205ENST00000535140 NUTM2AQ8IVF1 878 aaPredicted RBP27.88■■■□□ 2.05
OTUB1-205ENST00000535140 ZNF772Q68DY9 489 aaPredicted RBP27.85■■■□□ 2.05
OTUB1-205ENST00000535140 SLC4A1APQ9BWU0 796 aaKnown RBP27.84■■■□□ 2.05
OTUB1-205ENST00000535140 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
OTUB1-205ENST00000535140 DDX17Q92841 729 aaKnown RBP27.83■■■□□ 2.05
OTUB1-205ENST00000535140 VGFO15240 615 aaPredicted RBP27.81■■■□□ 2.04
OTUB1-205ENST00000535140 PTCH1Q13635 1447 aa27.8■■■□□ 2.04
OTUB1-205ENST00000535140 PPLO60437 1756 aa27.78■■■□□ 2.04
OTUB1-205ENST00000535140 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
OTUB1-205ENST00000535140 C1orf167Q5SNV9 1468 aa27.77■■■□□ 2.04
OTUB1-205ENST00000535140 LRRC59Q96AG4 307 aaKnown RBP27.77■■■□□ 2.04
OTUB1-205ENST00000535140 FOXD1Q16676 465 aa27.76■■■□□ 2.03
OTUB1-205ENST00000535140 PNPLA6Q8IY17 1366 aa27.75■■■□□ 2.03
OTUB1-205ENST00000535140 RPGRIP1LQ68CZ1 1315 aa27.75■■■□□ 2.03
OTUB1-205ENST00000535140 AFF2P51816 1311 aa27.74■■■□□ 2.03
OTUB1-205ENST00000535140 RXRBP28702 533 aa27.71■■■□□ 2.03
OTUB1-205ENST00000535140 PRAG1Q86YV5 1406 aa27.7■■■□□ 2.03
OTUB1-205ENST00000535140 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
OTUB1-205ENST00000535140 ORAI2Q96SN7 254 aa27.69■■■□□ 2.02
OTUB1-205ENST00000535140 LAMC1P11047 1609 aa27.67■■■□□ 2.02
OTUB1-205ENST00000535140 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
OTUB1-205ENST00000535140 UPF1Q92900 1129 aaKnown RBP eCLIP27.65■■■□□ 2.02
OTUB1-205ENST00000535140 ADGRF5Q8IZF2 1346 aa27.64■■■□□ 2.01
OTUB1-205ENST00000535140 CDK12Q9NYV4 1490 aaPredicted RBP27.64■■■□□ 2.01
OTUB1-205ENST00000535140 ADAMTS2O95450 1211 aa27.63■■■□□ 2.01
OTUB1-205ENST00000535140 RGL3Q3MIN7 710 aa27.63■■■□□ 2.01
OTUB1-205ENST00000535140 SOS2Q07890 1332 aaPredicted RBP27.62■■■□□ 2.01
OTUB1-205ENST00000535140 CDC42BPGQ6DT37 1551 aa27.61■■■□□ 2.01
OTUB1-205ENST00000535140 SPATA31E1Q6ZUB1 1445 aa27.6■■■□□ 2.01
OTUB1-205ENST00000535140 IFT172Q9UG01 1749 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms