RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 ADGRG1Q9Y653 693 aa7.61□□□□□ -1.19
SNHG1-201ENST00000535076 TAF7LQ5H9L4 462 aa7.6□□□□□ -1.19
SNHG1-201ENST00000535076 PPARGC1BQ86YN6 1023 aaKnown RBP7.6□□□□□ -1.19
SNHG1-201ENST00000535076 LRCH3Q96II8 777 aa7.6□□□□□ -1.19
SNHG1-201ENST00000535076 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-201ENST00000535076 FCHSD2O94868 740 aa7.58□□□□□ -1.2
SNHG1-201ENST00000535076 NEUROD1Q13562 356 aa7.58□□□□□ -1.2
SNHG1-201ENST00000535076 SWT1Q5T5J6 900 aaKnown RBP7.57□□□□□ -1.2
SNHG1-201ENST00000535076 TSR3Q9UJK0 312 aaKnown RBP7.57□□□□□ -1.2
SNHG1-201ENST00000535076 FGD1P98174 961 aa7.54□□□□□ -1.2
SNHG1-201ENST00000535076 NPM2Q86SE8 214 aaKnown RBP7.54□□□□□ -1.2
SNHG1-201ENST00000535076 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
SNHG1-201ENST00000535076 ITGBL1O95965 494 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-201ENST00000535076 APLP1P51693 650 aa7.53□□□□□ -1.2
SNHG1-201ENST00000535076 HIC1Q14526 733 aa7.53□□□□□ -1.2
SNHG1-201ENST00000535076 NLRP7Q8WX94 980 aa7.53□□□□□ -1.2
SNHG1-201ENST00000535076 CDK11AQ9UQ88 783 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-201ENST00000535076 GNPATO15228 680 aa7.52□□□□□ -1.21
SNHG1-201ENST00000535076 PPP4CP60510 307 aa7.52□□□□□ -1.21
SNHG1-201ENST00000535076 ZNF326Q5BKZ1 582 aaKnown RBP7.52□□□□□ -1.21
SNHG1-201ENST00000535076 SMYD5Q6GMV2 418 aa7.52□□□□□ -1.21
SNHG1-201ENST00000535076 TMEM134Q9H6X4 195 aa7.52□□□□□ -1.21
SNHG1-201ENST00000535076 RNF40O75150 1001 aa7.51□□□□□ -1.21
SNHG1-201ENST00000535076 GLIPR1L2Q4G1C9 344 aa7.51□□□□□ -1.21
SNHG1-201ENST00000535076 GPIHBP1Q8IV16 184 aa7.51□□□□□ -1.21
SNHG1-201ENST00000535076 PXYLP1Q8TE99 480 aa7.51□□□□□ -1.21
SNHG1-201ENST00000535076 PHOX2BQ99453 314 aa7.51□□□□□ -1.21
SNHG1-201ENST00000535076 DNAJB2P25686 324 aa7.5□□□□□ -1.21
SNHG1-201ENST00000535076 TJAP1Q5JTD0 557 aa7.5□□□□□ -1.21
SNHG1-201ENST00000535076 IFFO2Q5TF58 517 aa7.5□□□□□ -1.21
SNHG1-201ENST00000535076 METTL3Q86U44 580 aaKnown RBP7.5□□□□□ -1.21
SNHG1-201ENST00000535076 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
SNHG1-201ENST00000535076 A0A0G2JS52 829 aa7.49□□□□□ -1.21
SNHG1-201ENST00000535076 BRD2P25440 801 aaKnown RBP7.49□□□□□ -1.21
SNHG1-201ENST00000535076 NYAP1Q6ZVC0 841 aa7.49□□□□□ -1.21
SNHG1-201ENST00000535076 SLC10A3P09131 477 aa7.48□□□□□ -1.21
SNHG1-201ENST00000535076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.47□□□□□ -1.21
SNHG1-201ENST00000535076 MTRQ99707 1265 aa7.47□□□□□ -1.21
SNHG1-201ENST00000535076 SLF2Q8IX21 1173 aa7.46□□□□□ -1.22
SNHG1-201ENST00000535076 ZNF516Q92618 1163 aa7.46□□□□□ -1.22
SNHG1-201ENST00000535076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.45□□□□□ -1.22
SNHG1-201ENST00000535076 BCANQ96GW7 911 aa7.45□□□□□ -1.22
SNHG1-201ENST00000535076 OATP04181 439 aa7.44□□□□□ -1.22
SNHG1-201ENST00000535076 KCNC4Q03721 635 aa7.44□□□□□ -1.22
SNHG1-201ENST00000535076 NKX2-3Q8TAU0 364 aa7.44□□□□□ -1.22
SNHG1-201ENST00000535076 HDGFP51858 240 aaKnown RBP7.43□□□□□ -1.22
SNHG1-201ENST00000535076 COPS2P61201 443 aa7.43□□□□□ -1.22
SNHG1-201ENST00000535076 LMOD2Q6P5Q4 547 aa7.43□□□□□ -1.22
SNHG1-201ENST00000535076 CFHP08603 1231 aa7.42□□□□□ -1.22
SNHG1-201ENST00000535076 RSPH4AQ5TD94 716 aa7.42□□□□□ -1.22
SNHG1-201ENST00000535076 RSPH6AQ9H0K4 717 aa7.42□□□□□ -1.22
SNHG1-201ENST00000535076 SALL2Q9Y467 1007 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-201ENST00000535076 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
SNHG1-201ENST00000535076 AAMPQ13685 434 aa7.41□□□□□ -1.22
SNHG1-201ENST00000535076 BLOC1S3Q6QNY0 202 aa7.41□□□□□ -1.22
SNHG1-201ENST00000535076 IL21Q9HBE4 155 aa7.41□□□□□ -1.22
SNHG1-201ENST00000535076 C14orf37Q86TY3 774 aa7.4□□□□□ -1.22
SNHG1-201ENST00000535076 IRF6O14896 467 aa7.39□□□□□ -1.23
SNHG1-201ENST00000535076 ACTN4O43707 911 aaKnown RBP7.39□□□□□ -1.23
SNHG1-201ENST00000535076 TLL1O43897 1013 aa7.39□□□□□ -1.23
SNHG1-201ENST00000535076 CCDC102AQ96A19 550 aa7.39□□□□□ -1.23
SNHG1-201ENST00000535076 CCDC180Q9P1Z9 1646 aa7.38□□□□□ -1.23
SNHG1-201ENST00000535076 PCGF6Q9BYE7 350 aa7.38□□□□□ -1.23
SNHG1-201ENST00000535076 BCCIPQ9P287 314 aaKnown RBP eCLIP7.38□□□□□ -1.23
SNHG1-201ENST00000535076 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
SNHG1-201ENST00000535076 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
SNHG1-201ENST00000535076 PCDHB3Q9Y5E6 796 aa7.37□□□□□ -1.23
SNHG1-201ENST00000535076 DDX11L8A8MPP1 907 aa7.36□□□□□ -1.23
SNHG1-201ENST00000535076 PUS10Q3MIT2 529 aaKnown RBP7.36□□□□□ -1.23
SNHG1-201ENST00000535076 ZC3H15Q8WU90 426 aaKnown RBP7.36□□□□□ -1.23
SNHG1-201ENST00000535076 MINK1Q8N4C8 1332 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-201ENST00000535076 ZPR1O75312 459 aa7.35□□□□□ -1.23
SNHG1-201ENST00000535076 PPP1R18Q6NYC8 613 aa7.35□□□□□ -1.23
SNHG1-201ENST00000535076 NECTIN2Q92692 538 aa7.35□□□□□ -1.23
SNHG1-201ENST00000535076 DCAF1Q9Y4B6 1507 aa7.35□□□□□ -1.23
SNHG1-201ENST00000535076 ZMYND10O75800 440 aa7.34□□□□□ -1.23
SNHG1-201ENST00000535076 HMGB1P09429 215 aaKnown RBP7.34□□□□□ -1.23
SNHG1-201ENST00000535076 SLC4A3P48751 1232 aa7.34□□□□□ -1.23
SNHG1-201ENST00000535076 MDM2Q00987 491 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-201ENST00000535076 KMT5BQ4FZB7 885 aa7.34□□□□□ -1.23
SNHG1-201ENST00000535076 REPIN1Q9BWE0 567 aaKnown RBP7.34□□□□□ -1.23
SNHG1-201ENST00000535076 CDK11BP21127 795 aaKnown RBP7.33□□□□□ -1.24
SNHG1-201ENST00000535076 BARGINQ6ZT62 677 aa7.33□□□□□ -1.24
SNHG1-201ENST00000535076 RDH13Q8NBN7 331 aa7.33□□□□□ -1.24
SNHG1-201ENST00000535076 TMUB1Q9BVT8 246 aa7.33□□□□□ -1.24
SNHG1-201ENST00000535076 RGS20O76081 388 aa7.32□□□□□ -1.24
SNHG1-201ENST00000535076 GCGRP47871 477 aa7.32□□□□□ -1.24
SNHG1-201ENST00000535076 FUT2Q10981 343 aa7.32□□□□□ -1.24
SNHG1-201ENST00000535076 EMID1Q96A84 441 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-201ENST00000535076 PRR14Q9BWN1 585 aa7.32□□□□□ -1.24
SNHG1-201ENST00000535076 CD46P15529 392 aa7.31□□□□□ -1.24
SNHG1-201ENST00000535076 TPRNQ4KMQ1 711 aa7.31□□□□□ -1.24
SNHG1-201ENST00000535076 MORN1Q5T089 497 aa7.3□□□□□ -1.24
SNHG1-201ENST00000535076 ZMYND15Q9H091 742 aa7.3□□□□□ -1.24
SNHG1-201ENST00000535076 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.3□□□□□ -1.24
SNHG1-201ENST00000535076 SCUBE3Q8IX30 993 aa7.29□□□□□ -1.24
SNHG1-201ENST00000535076 HLA-CQ95604 372 aa7.29□□□□□ -1.24
SNHG1-201ENST00000535076 RNF223E7ERA6 249 aa7.28□□□□□ -1.24
SNHG1-201ENST00000535076 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-201ENST00000535076 S1PR4O95977 384 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms