RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 TET3O43151 1660 aa17.93■□□□□ 0.46
CTNND1-238ENST00000534647 RPRD2Q5VT52 1461 aaKnown RBP17.92■□□□□ 0.46
CTNND1-238ENST00000534647 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
CTNND1-238ENST00000534647 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
CTNND1-238ENST00000534647 XIRP1Q702N8 1843 aaKnown RBP17.89■□□□□ 0.45
CTNND1-238ENST00000534647 SLC26A8Q96RN1 970 aa17.89■□□□□ 0.45
CTNND1-238ENST00000534647 PROSER2Q86WR7 435 aaPredicted RBP17.88■□□□□ 0.45
CTNND1-238ENST00000534647 ADGRB3O60242 1522 aa17.88■□□□□ 0.45
CTNND1-238ENST00000534647 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
CTNND1-238ENST00000534647 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
CTNND1-238ENST00000534647 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
CTNND1-238ENST00000534647 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
CTNND1-238ENST00000534647 PLEKHG1Q9ULL1 1385 aa17.83■□□□□ 0.45
CTNND1-238ENST00000534647 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
CTNND1-238ENST00000534647 RGS17Q9UGC6 210 aaPredicted RBP17.83■□□□□ 0.44
CTNND1-238ENST00000534647 NWD1Q149M9 1564 aa17.83■□□□□ 0.44
CTNND1-238ENST00000534647 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
CTNND1-238ENST00000534647 ROCK1Q13464 1354 aa17.81■□□□□ 0.44
CTNND1-238ENST00000534647 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
CTNND1-238ENST00000534647 RIMS2Q9UQ26 1411 aa17.8■□□□□ 0.44
CTNND1-238ENST00000534647 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
CTNND1-238ENST00000534647 BCANQ96GW7 911 aa17.79■□□□□ 0.44
CTNND1-238ENST00000534647 SLAIN2Q9P270 581 aa17.79■□□□□ 0.44
CTNND1-238ENST00000534647 MSH6P52701 1360 aa17.79■□□□□ 0.44
CTNND1-238ENST00000534647 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
CTNND1-238ENST00000534647 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
CTNND1-238ENST00000534647 UNC13BO14795 1591 aa17.77■□□□□ 0.44
CTNND1-238ENST00000534647 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
CTNND1-238ENST00000534647 ROBO1Q9Y6N7 1651 aa17.76■□□□□ 0.43
CTNND1-238ENST00000534647 GCC2Q8IWJ2 1684 aa17.75■□□□□ 0.43
CTNND1-238ENST00000534647 PIK3R4Q99570 1358 aa17.75■□□□□ 0.43
CTNND1-238ENST00000534647 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
CTNND1-238ENST00000534647 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
CTNND1-238ENST00000534647 NUP155O75694 1391 aa17.7■□□□□ 0.42
CTNND1-238ENST00000534647 IQGAP3Q86VI3 1631 aa17.7■□□□□ 0.42
CTNND1-238ENST00000534647 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
CTNND1-238ENST00000534647 POTEAQ6S8J7 498 aa17.7■□□□□ 0.42
CTNND1-238ENST00000534647 C19orf44Q9H6X5 657 aa17.7■□□□□ 0.42
CTNND1-238ENST00000534647 E9PCH4 1651 aa17.7■□□□□ 0.42
CTNND1-238ENST00000534647 DIP2AQ14689 1571 aa17.7■□□□□ 0.42
CTNND1-238ENST00000534647 JCADQ9P266 1359 aa17.69■□□□□ 0.42
CTNND1-238ENST00000534647 PIAS4Q8N2W9 510 aaPredicted RBP17.69■□□□□ 0.42
CTNND1-238ENST00000534647 MYO5BQ9ULV0 1848 aa17.69■□□□□ 0.42
CTNND1-238ENST00000534647 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
CTNND1-238ENST00000534647 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
CTNND1-238ENST00000534647 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
CTNND1-238ENST00000534647 AMOTL2Q9Y2J4 779 aa17.65■□□□□ 0.42
CTNND1-238ENST00000534647 ATF3P18847 181 aa17.64■□□□□ 0.41
CTNND1-238ENST00000534647 SPATA31A6Q5VVP1 1343 aa17.64■□□□□ 0.41
CTNND1-238ENST00000534647 PHLPP1O60346 1717 aa17.64■□□□□ 0.41
CTNND1-238ENST00000534647 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
CTNND1-238ENST00000534647 TRPM2O94759 1503 aa17.62■□□□□ 0.41
CTNND1-238ENST00000534647 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
CTNND1-238ENST00000534647 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
CTNND1-238ENST00000534647 DCCP43146 1447 aa17.6■□□□□ 0.41
CTNND1-238ENST00000534647 AHDC1Q5TGY3 1603 aaPredicted RBP17.6■□□□□ 0.41
CTNND1-238ENST00000534647 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.6■□□□□ 0.41
CTNND1-238ENST00000534647 ITGAEP38570 1179 aa17.59■□□□□ 0.41
CTNND1-238ENST00000534647 SETBP1Q9Y6X0 1596 aa17.58■□□□□ 0.41
CTNND1-238ENST00000534647 BRINP3Q76B58 766 aa17.57■□□□□ 0.4
CTNND1-238ENST00000534647 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
CTNND1-238ENST00000534647 LRP6O75581 1613 aa17.54■□□□□ 0.4
CTNND1-238ENST00000534647 METP08581 1390 aa17.54■□□□□ 0.4
CTNND1-238ENST00000534647 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
CTNND1-238ENST00000534647 ZNF326Q5BKZ1 582 aaKnown RBP17.54■□□□□ 0.4
CTNND1-238ENST00000534647 XRN1Q8IZH2 1706 aaKnown RBP17.53■□□□□ 0.4
CTNND1-238ENST00000534647 SPHKAPQ2M3C7 1700 aa17.52■□□□□ 0.4
CTNND1-238ENST00000534647 SHPRHQ149N8 1683 aa17.52■□□□□ 0.4
CTNND1-238ENST00000534647 SETD5Q9C0A6 1442 aa17.52■□□□□ 0.4
CTNND1-238ENST00000534647 MST1RQ04912 1400 aa17.51■□□□□ 0.39
CTNND1-238ENST00000534647 MEX3CQ5U5Q3 659 aaKnown RBP17.51■□□□□ 0.39
CTNND1-238ENST00000534647 RRBP1Q9P2E9 1410 aaKnown RBP17.51■□□□□ 0.39
CTNND1-238ENST00000534647 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
CTNND1-238ENST00000534647 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
CTNND1-238ENST00000534647 NAIPQ13075 1403 aa17.49■□□□□ 0.39
CTNND1-238ENST00000534647 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
CTNND1-238ENST00000534647 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
CTNND1-238ENST00000534647 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
CTNND1-238ENST00000534647 VGFO15240 615 aaPredicted RBP17.48■□□□□ 0.39
CTNND1-238ENST00000534647 FKBP8Q14318 412 aa17.47■□□□□ 0.39
CTNND1-238ENST00000534647 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
CTNND1-238ENST00000534647 CLTCL1P53675 1640 aa17.46■□□□□ 0.39
CTNND1-238ENST00000534647 RXRBP28702 533 aa17.45■□□□□ 0.38
CTNND1-238ENST00000534647 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
CTNND1-238ENST00000534647 PRAG1Q86YV5 1406 aa17.44■□□□□ 0.38
CTNND1-238ENST00000534647 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
CTNND1-238ENST00000534647 NUTM2BA6NNL0 878 aaPredicted RBP17.43■□□□□ 0.38
CTNND1-238ENST00000534647 NUTM2EB1AL46 878 aaPredicted RBP17.43■□□□□ 0.38
CTNND1-238ENST00000534647 NUTM2AQ8IVF1 878 aaPredicted RBP17.43■□□□□ 0.38
CTNND1-238ENST00000534647 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.38
CTNND1-238ENST00000534647 PTCH1Q13635 1447 aa17.43■□□□□ 0.38
CTNND1-238ENST00000534647 HFM1A2PYH4 1435 aa17.42■□□□□ 0.38
CTNND1-238ENST00000534647 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
CTNND1-238ENST00000534647 AFF2P51816 1311 aa17.41■□□□□ 0.38
CTNND1-238ENST00000534647 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
CTNND1-238ENST00000534647 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
CTNND1-238ENST00000534647 SETD1AO15047 1707 aaKnown RBP17.4■□□□□ 0.38
CTNND1-238ENST00000534647 KIF1BO60333 1816 aa17.4■□□□□ 0.38
CTNND1-238ENST00000534647 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
CTNND1-238ENST00000534647 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms