RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CCDC144AA2RUR9 1427 aa20.76■□□□□ 0.91
VPS11-205ENST00000534551 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
VPS11-205ENST00000534551 HRCP23327 699 aa20.74■□□□□ 0.91
VPS11-205ENST00000534551 TXNDC2Q86VQ3 553 aa20.74■□□□□ 0.91
VPS11-205ENST00000534551 NRXN3Q9Y4C0 1643 aa20.74■□□□□ 0.91
VPS11-205ENST00000534551 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
VPS11-205ENST00000534551 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
VPS11-205ENST00000534551 ANKRD30BQ9BXX2 1392 aa20.71■□□□□ 0.91
VPS11-205ENST00000534551 SPATA31E1Q6ZUB1 1445 aa20.7■□□□□ 0.9
VPS11-205ENST00000534551 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
VPS11-205ENST00000534551 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
VPS11-205ENST00000534551 EID1Q9Y6B2 187 aa20.69■□□□□ 0.9
VPS11-205ENST00000534551 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
VPS11-205ENST00000534551 SETD1AO15047 1707 aaKnown RBP20.67■□□□□ 0.9
VPS11-205ENST00000534551 PCGF6Q9BYE7 350 aa20.66■□□□□ 0.9
VPS11-205ENST00000534551 PLEKHG1Q9ULL1 1385 aa20.66■□□□□ 0.9
VPS11-205ENST00000534551 SETBP1Q9Y6X0 1596 aa20.65■□□□□ 0.9
VPS11-205ENST00000534551 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
VPS11-205ENST00000534551 PPP1R15AO75807 674 aaPredicted RBP20.65■□□□□ 0.9
VPS11-205ENST00000534551 ADAMTS13Q76LX8 1427 aa20.63■□□□□ 0.89
VPS11-205ENST00000534551 SLC26A8Q96RN1 970 aa20.62■□□□□ 0.89
VPS11-205ENST00000534551 DIP2AQ14689 1571 aa20.62■□□□□ 0.89
VPS11-205ENST00000534551 NWD1Q149M9 1564 aa20.62■□□□□ 0.89
VPS11-205ENST00000534551 RGL3Q3MIN7 710 aa20.61■□□□□ 0.89
VPS11-205ENST00000534551 CHD2O14647 1828 aaKnown RBP20.61■□□□□ 0.89
VPS11-205ENST00000534551 XIRP1Q702N8 1843 aaKnown RBP20.61■□□□□ 0.89
VPS11-205ENST00000534551 BCANQ96GW7 911 aa20.59■□□□□ 0.89
VPS11-205ENST00000534551 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.89
VPS11-205ENST00000534551 CPS1P31327 1500 aa20.56■□□□□ 0.88
VPS11-205ENST00000534551 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
VPS11-205ENST00000534551 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
VPS11-205ENST00000534551 ADGRF5Q8IZF2 1346 aa20.53■□□□□ 0.88
VPS11-205ENST00000534551 ASXL1Q8IXJ9 1541 aa20.53■□□□□ 0.88
VPS11-205ENST00000534551 HDGFP51858 240 aaKnown RBP20.53■□□□□ 0.88
VPS11-205ENST00000534551 MYOM2P54296 1465 aa20.53■□□□□ 0.88
VPS11-205ENST00000534551 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
VPS11-205ENST00000534551 LRRC7Q96NW7 1537 aa20.52■□□□□ 0.87
VPS11-205ENST00000534551 CERKQ8TCT0 537 aa20.51■□□□□ 0.87
VPS11-205ENST00000534551 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
VPS11-205ENST00000534551 RPGRIP1LQ68CZ1 1315 aa20.51■□□□□ 0.87
VPS11-205ENST00000534551 METP08581 1390 aa20.5■□□□□ 0.87
VPS11-205ENST00000534551 SIN3AQ96ST3 1273 aa20.5■□□□□ 0.87
VPS11-205ENST00000534551 NRXN1Q9ULB1 1477 aa20.5■□□□□ 0.87
VPS11-205ENST00000534551 NKTRP30414 1462 aaKnown RBP20.49■□□□□ 0.87
VPS11-205ENST00000534551 LAMC1P11047 1609 aa20.48■□□□□ 0.87
VPS11-205ENST00000534551 VGFO15240 615 aaPredicted RBP20.46■□□□□ 0.87
VPS11-205ENST00000534551 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
VPS11-205ENST00000534551 TBX22Q9Y458 520 aa20.46■□□□□ 0.87
VPS11-205ENST00000534551 IQSEC2Q5JU85 1478 aa20.44■□□□□ 0.86
VPS11-205ENST00000534551 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
VPS11-205ENST00000534551 KCNA6P17658 529 aa20.43■□□□□ 0.86
VPS11-205ENST00000534551 NALCNQ8IZF0 1738 aa20.43■□□□□ 0.86
VPS11-205ENST00000534551 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
VPS11-205ENST00000534551 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
VPS11-205ENST00000534551 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
VPS11-205ENST00000534551 TMEM94Q12767 1356 aa20.4■□□□□ 0.86
VPS11-205ENST00000534551 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
VPS11-205ENST00000534551 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
VPS11-205ENST00000534551 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
VPS11-205ENST00000534551 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
VPS11-205ENST00000534551 KIAA1210Q9ULL0 1709 aa20.36■□□□□ 0.85
VPS11-205ENST00000534551 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
VPS11-205ENST00000534551 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
VPS11-205ENST00000534551 PROSER2Q86WR7 435 aaPredicted RBP20.35■□□□□ 0.85
VPS11-205ENST00000534551 PRAG1Q86YV5 1406 aa20.35■□□□□ 0.85
VPS11-205ENST00000534551 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
VPS11-205ENST00000534551 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
VPS11-205ENST00000534551 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
VPS11-205ENST00000534551 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
VPS11-205ENST00000534551 ARHGEF28Q8N1W1 1705 aaKnown RBP20.33■□□□□ 0.84
VPS11-205ENST00000534551 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
VPS11-205ENST00000534551 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
VPS11-205ENST00000534551 TECPR2O15040 1411 aa20.3■□□□□ 0.84
VPS11-205ENST00000534551 ILDR1Q86SU0 546 aaPredicted RBP20.3■□□□□ 0.84
VPS11-205ENST00000534551 STK26Q9P289 416 aa20.3■□□□□ 0.84
VPS11-205ENST00000534551 LRPPRCP42704 1394 aaKnown RBP20.3■□□□□ 0.84
VPS11-205ENST00000534551 UBAP1LF5GYI3 381 aa20.29■□□□□ 0.84
VPS11-205ENST00000534551 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
VPS11-205ENST00000534551 PLEKHH1Q9ULM0 1364 aa20.29■□□□□ 0.84
VPS11-205ENST00000534551 TONSLQ96HA7 1378 aa20.28■□□□□ 0.84
VPS11-205ENST00000534551 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.83
VPS11-205ENST00000534551 MSH6P52701 1360 aa20.26■□□□□ 0.83
VPS11-205ENST00000534551 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
VPS11-205ENST00000534551 C14orf37Q86TY3 774 aa20.25■□□□□ 0.83
VPS11-205ENST00000534551 DLC1Q96QB1 1528 aa20.25■□□□□ 0.83
VPS11-205ENST00000534551 ABCC11Q96J66 1382 aa20.23■□□□□ 0.83
VPS11-205ENST00000534551 PIP4K2BP78356 416 aa20.23■□□□□ 0.83
VPS11-205ENST00000534551 CCER1Q8TC90 406 aaPredicted RBP20.23■□□□□ 0.83
VPS11-205ENST00000534551 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
VPS11-205ENST00000534551 NCOA3Q9Y6Q9 1424 aa20.22■□□□□ 0.83
VPS11-205ENST00000534551 NBPF1Q3BBV0 1214 aa20.22■□□□□ 0.83
VPS11-205ENST00000534551 CDC42BPGQ6DT37 1551 aa20.21■□□□□ 0.83
VPS11-205ENST00000534551 NBPF8Q3BBV2 869 aa20.21■□□□□ 0.83
VPS11-205ENST00000534551 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
VPS11-205ENST00000534551 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
VPS11-205ENST00000534551 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
VPS11-205ENST00000534551 RGPD8O14715 1765 aaPredicted RBP20.19■□□□□ 0.82
VPS11-205ENST00000534551 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
VPS11-205ENST00000534551 QRICH2Q9H0J4 1663 aa20.19■□□□□ 0.82
VPS11-205ENST00000534551 DCCP43146 1447 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms