RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 IFT172Q9UG01 1749 aa14.43□□□□□ -0.1
RPS3-219ENST00000534440 FBXO31Q5XUX0 539 aaPredicted RBP14.42□□□□□ -0.1
RPS3-219ENST00000534440 RGL3Q3MIN7 710 aa14.4□□□□□ -0.1
RPS3-219ENST00000534440 PRAG1Q86YV5 1406 aa14.4□□□□□ -0.1
RPS3-219ENST00000534440 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
RPS3-219ENST00000534440 RALGAPBQ86X10 1494 aa14.39□□□□□ -0.11
RPS3-219ENST00000534440 KCNA4P22459 653 aa14.39□□□□□ -0.11
RPS3-219ENST00000534440 MYO5BQ9ULV0 1848 aa14.38□□□□□ -0.11
RPS3-219ENST00000534440 A2ML1A8K2U0 1454 aa14.38□□□□□ -0.11
RPS3-219ENST00000534440 TMEM131LA2VDJ0 1609 aa14.38□□□□□ -0.11
RPS3-219ENST00000534440 TRPM1Q7Z4N2 1603 aa14.38□□□□□ -0.11
RPS3-219ENST00000534440 UBAP1LF5GYI3 381 aa14.38□□□□□ -0.11
RPS3-219ENST00000534440 DCAF11Q8TEB1 546 aa14.38□□□□□ -0.11
RPS3-219ENST00000534440 MYO3AQ8NEV4 1616 aa14.37□□□□□ -0.11
RPS3-219ENST00000534440 PPLO60437 1756 aa14.37□□□□□ -0.11
RPS3-219ENST00000534440 MYOM2P54296 1465 aa14.37□□□□□ -0.11
RPS3-219ENST00000534440 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
RPS3-219ENST00000534440 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
RPS3-219ENST00000534440 IDI1Q13907 227 aa14.35□□□□□ -0.11
RPS3-219ENST00000534440 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
RPS3-219ENST00000534440 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
RPS3-219ENST00000534440 TNRQ92752 1358 aa14.34□□□□□ -0.11
RPS3-219ENST00000534440 NRXN1Q9ULB1 1477 aa14.33□□□□□ -0.12
RPS3-219ENST00000534440 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.12
RPS3-219ENST00000534440 SLC52A1Q9NWF4 448 aa14.32□□□□□ -0.12
RPS3-219ENST00000534440 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
RPS3-219ENST00000534440 LAMC1P11047 1609 aa14.3□□□□□ -0.12
RPS3-219ENST00000534440 HSPA1LP34931 641 aa14.29□□□□□ -0.12
RPS3-219ENST00000534440 ANKLE2Q86XL3 938 aa14.29□□□□□ -0.12
RPS3-219ENST00000534440 ADGRF5Q8IZF2 1346 aa14.29□□□□□ -0.12
RPS3-219ENST00000534440 GPRASP1Q5JY77 1395 aa14.29□□□□□ -0.12
RPS3-219ENST00000534440 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
RPS3-219ENST00000534440 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
RPS3-219ENST00000534440 MED14O60244 1454 aa14.28□□□□□ -0.12
RPS3-219ENST00000534440 PIK3C2GO75747 1445 aa14.28□□□□□ -0.12
RPS3-219ENST00000534440 KDM5AP29375 1690 aaKnown RBP14.28□□□□□ -0.12
RPS3-219ENST00000534440 THEMISQ8N1K5 641 aaPredicted RBP14.28□□□□□ -0.12
RPS3-219ENST00000534440 NLRP1Q9C000 1473 aa14.27□□□□□ -0.12
RPS3-219ENST00000534440 HIRIP3Q9BW71 556 aaPredicted RBP14.27□□□□□ -0.13
RPS3-219ENST00000534440 CPS1P31327 1500 aa14.26□□□□□ -0.13
RPS3-219ENST00000534440 ROCK2O75116 1388 aaKnown RBP14.26□□□□□ -0.13
RPS3-219ENST00000534440 HSPA5P11021 654 aaKnown RBP14.26□□□□□ -0.13
RPS3-219ENST00000534440 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
RPS3-219ENST00000534440 IQGAP1P46940 1657 aa14.26□□□□□ -0.13
RPS3-219ENST00000534440 ZFYVE9O95405 1425 aa14.25□□□□□ -0.13
RPS3-219ENST00000534440 USP47Q96K76 1375 aa14.25□□□□□ -0.13
RPS3-219ENST00000534440 RPGRIP1LQ68CZ1 1315 aa14.25□□□□□ -0.13
RPS3-219ENST00000534440 TOM1O60784 492 aa14.25□□□□□ -0.13
RPS3-219ENST00000534440 PIP4K2BP78356 416 aa14.24□□□□□ -0.13
RPS3-219ENST00000534440 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
RPS3-219ENST00000534440 NPHP4O75161 1426 aaPredicted RBP14.24□□□□□ -0.13
RPS3-219ENST00000534440 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
RPS3-219ENST00000534440 ADGRB1O14514 1584 aa14.23□□□□□ -0.13
RPS3-219ENST00000534440 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
RPS3-219ENST00000534440 ASXL1Q8IXJ9 1541 aa14.23□□□□□ -0.13
RPS3-219ENST00000534440 RIMS2Q9UQ26 1411 aa14.23□□□□□ -0.13
RPS3-219ENST00000534440 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
RPS3-219ENST00000534440 EIF4G2P78344 907 aaKnown RBP eCLIP14.22□□□□□ -0.13
RPS3-219ENST00000534440 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
RPS3-219ENST00000534440 CARD11Q9BXL7 1154 aa14.22□□□□□ -0.13
RPS3-219ENST00000534440 SETBP1Q9Y6X0 1596 aa14.22□□□□□ -0.13
RPS3-219ENST00000534440 NRXN3Q9Y4C0 1643 aa14.21□□□□□ -0.13
RPS3-219ENST00000534440 CFAP70Q5T0N1 1121 aa14.2□□□□□ -0.14
RPS3-219ENST00000534440 SETD1AO15047 1707 aaKnown RBP14.2□□□□□ -0.14
RPS3-219ENST00000534440 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
RPS3-219ENST00000534440 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
RPS3-219ENST00000534440 SLIT1O75093 1534 aa14.18□□□□□ -0.14
RPS3-219ENST00000534440 TMEM2Q9UHN6 1383 aa14.18□□□□□ -0.14
RPS3-219ENST00000534440 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
RPS3-219ENST00000534440 ARHGAP23Q9P227 1491 aa14.18□□□□□ -0.14
RPS3-219ENST00000534440 LRRC7Q96NW7 1537 aa14.17□□□□□ -0.14
RPS3-219ENST00000534440 LTKP29376 864 aa14.17□□□□□ -0.14
RPS3-219ENST00000534440 C11orf95C9JLR9 678 aaPredicted RBP14.16□□□□□ -0.14
RPS3-219ENST00000534440 VGFO15240 615 aaPredicted RBP14.16□□□□□ -0.14
RPS3-219ENST00000534440 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
RPS3-219ENST00000534440 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
RPS3-219ENST00000534440 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
RPS3-219ENST00000534440 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
RPS3-219ENST00000534440 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
RPS3-219ENST00000534440 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
RPS3-219ENST00000534440 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
RPS3-219ENST00000534440 TXNDC2Q86VQ3 553 aa14.11□□□□□ -0.15
RPS3-219ENST00000534440 TESK2Q96S53 571 aa14.11□□□□□ -0.15
RPS3-219ENST00000534440 KIF7Q2M1P5 1343 aa14.11□□□□□ -0.15
RPS3-219ENST00000534440 ADAMTS13Q76LX8 1427 aa14.1□□□□□ -0.15
RPS3-219ENST00000534440 TMEM132EQ6IEE7 984 aa14.1□□□□□ -0.15
RPS3-219ENST00000534440 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.1□□□□□ -0.15
RPS3-219ENST00000534440 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
RPS3-219ENST00000534440 QRICH2Q9H0J4 1663 aa14.09□□□□□ -0.15
RPS3-219ENST00000534440 RGS17Q9UGC6 210 aaPredicted RBP14.08□□□□□ -0.16
RPS3-219ENST00000534440 EIF3AQ14152 1382 aaKnown RBP14.08□□□□□ -0.16
RPS3-219ENST00000534440 STRCP1A6NGW2 1772 aa14.07□□□□□ -0.16
RPS3-219ENST00000534440 METP08581 1390 aa14.07□□□□□ -0.16
RPS3-219ENST00000534440 KNDC1Q76NI1 1749 aa14.07□□□□□ -0.16
RPS3-219ENST00000534440 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
RPS3-219ENST00000534440 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
RPS3-219ENST00000534440 TRAK1Q9UPV9 953 aa14.05□□□□□ -0.16
RPS3-219ENST00000534440 DLC1Q96QB1 1528 aa14.05□□□□□ -0.16
RPS3-219ENST00000534440 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
RPS3-219ENST00000534440 LRPPRCP42704 1394 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms