RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 TXNDC2Q86VQ3 553 aa35.5■■■■□ 3.27
SIPA1-210ENST00000534406 NPHP4O75161 1426 aaPredicted RBP35.49■■■■□ 3.27
SIPA1-210ENST00000534406 LTKP29376 864 aa35.48■■■■□ 3.27
SIPA1-210ENST00000534406 ZNF326Q5BKZ1 582 aaKnown RBP35.45■■■■□ 3.27
SIPA1-210ENST00000534406 DHX57Q6P158 1386 aaKnown RBP35.45■■■■□ 3.27
SIPA1-210ENST00000534406 NEXMIFQ5QGS0 1516 aa35.43■■■■□ 3.26
SIPA1-210ENST00000534406 SPATA31E1Q6ZUB1 1445 aa35.43■■■■□ 3.26
SIPA1-210ENST00000534406 HDGFP51858 240 aaKnown RBP35.43■■■■□ 3.26
SIPA1-210ENST00000534406 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.43■■■■□ 3.26
SIPA1-210ENST00000534406 PPP1R15AO75807 674 aaPredicted RBP35.41■■■■□ 3.26
SIPA1-210ENST00000534406 PPLO60437 1756 aa35.37■■■■□ 3.25
SIPA1-210ENST00000534406 PLEKHG1Q9ULL1 1385 aa35.37■■■■□ 3.25
SIPA1-210ENST00000534406 RPGRIP1LQ68CZ1 1315 aa35.33■■■■□ 3.25
SIPA1-210ENST00000534406 NUTM2DQ5VT03 806 aaPredicted RBP35.33■■■■□ 3.25
SIPA1-210ENST00000534406 IFT172Q9UG01 1749 aa35.32■■■■□ 3.25
SIPA1-210ENST00000534406 RGL3Q3MIN7 710 aa35.3■■■■□ 3.24
SIPA1-210ENST00000534406 SETBP1Q9Y6X0 1596 aa35.26■■■■□ 3.24
SIPA1-210ENST00000534406 BCANQ96GW7 911 aa35.26■■■■□ 3.24
SIPA1-210ENST00000534406 DIP2AQ14689 1571 aa35.25■■■■□ 3.23
SIPA1-210ENST00000534406 VGFO15240 615 aaPredicted RBP35.23■■■■□ 3.23
SIPA1-210ENST00000534406 NRXN3Q9Y4C0 1643 aa35.23■■■■□ 3.23
SIPA1-210ENST00000534406 SENP3Q9H4L4 574 aaPredicted RBP35.22■■■■□ 3.23
SIPA1-210ENST00000534406 ZNF335Q9H4Z2 1342 aaPredicted RBP35.2■■■■□ 3.23
SIPA1-210ENST00000534406 ADAMTS13Q76LX8 1427 aa35.2■■■■□ 3.23
SIPA1-210ENST00000534406 SLC26A8Q96RN1 970 aa35.19■■■■□ 3.22
SIPA1-210ENST00000534406 MYOM2P54296 1465 aa35.18■■■■□ 3.22
SIPA1-210ENST00000534406 LTBP4Q8N2S1 1624 aa35.17■■■■□ 3.22
SIPA1-210ENST00000534406 TBX22Q9Y458 520 aa35.12■■■■□ 3.21
SIPA1-210ENST00000534406 STRCP1A6NGW2 1772 aa35.11■■■■□ 3.21
SIPA1-210ENST00000534406 CPS1P31327 1500 aa35.11■■■■□ 3.21
SIPA1-210ENST00000534406 ADGRF5Q8IZF2 1346 aa35.1■■■■□ 3.21
SIPA1-210ENST00000534406 NWD1Q149M9 1564 aa35.1■■■■□ 3.21
SIPA1-210ENST00000534406 SIN3AQ96ST3 1273 aa35.1■■■■□ 3.21
SIPA1-210ENST00000534406 PIK3C2GO75747 1445 aa35.09■■■■□ 3.21
SIPA1-210ENST00000534406 SETD1AO15047 1707 aaKnown RBP35.09■■■■□ 3.21
SIPA1-210ENST00000534406 NRXN1Q9ULB1 1477 aa35.09■■■■□ 3.21
SIPA1-210ENST00000534406 ALKQ9UM73 1620 aa35.07■■■■□ 3.21
SIPA1-210ENST00000534406 PIK3R4Q99570 1358 aa35.07■■■■□ 3.2
SIPA1-210ENST00000534406 CHD2O14647 1828 aaKnown RBP35.06■■■■□ 3.2
SIPA1-210ENST00000534406 NEUROD1Q13562 356 aa35.05■■■■□ 3.2
SIPA1-210ENST00000534406 DCAF11Q8TEB1 546 aa35.04■■■■□ 3.2
SIPA1-210ENST00000534406 STAC3Q96MF2 364 aa35.03■■■■□ 3.2
SIPA1-210ENST00000534406 LAMC1P11047 1609 aa35.03■■■■□ 3.2
SIPA1-210ENST00000534406 NKTRP30414 1462 aaKnown RBP35.02■■■■□ 3.2
SIPA1-210ENST00000534406 KCNA6P17658 529 aa35.01■■■■□ 3.2
SIPA1-210ENST00000534406 METP08581 1390 aa34.99■■■■□ 3.19
SIPA1-210ENST00000534406 KDM2AQ9Y2K7 1162 aa34.98■■■■□ 3.19
SIPA1-210ENST00000534406 CLSPNQ9HAW4 1339 aa34.98■■■■□ 3.19
SIPA1-210ENST00000534406 XRN1Q8IZH2 1706 aaKnown RBP34.98■■■■□ 3.19
SIPA1-210ENST00000534406 PTPRUQ92729 1446 aa34.96■■■■□ 3.19
SIPA1-210ENST00000534406 CERKQ8TCT0 537 aa34.95■■■■□ 3.19
SIPA1-210ENST00000534406 IQSEC2Q5JU85 1478 aa34.94■■■■□ 3.18
SIPA1-210ENST00000534406 LRRC7Q96NW7 1537 aa34.94■■■■□ 3.18
SIPA1-210ENST00000534406 L3MBTL2Q969R5 705 aa34.92■■■■□ 3.18
SIPA1-210ENST00000534406 ASXL1Q8IXJ9 1541 aa34.91■■■■□ 3.18
SIPA1-210ENST00000534406 TONSLQ96HA7 1378 aa34.91■■■■□ 3.18
SIPA1-210ENST00000534406 CCER1Q8TC90 406 aaPredicted RBP34.91■■■■□ 3.18
SIPA1-210ENST00000534406 C14orf93Q9H972 538 aaKnown RBP34.88■■■■□ 3.17
SIPA1-210ENST00000534406 AMOTL2Q9Y2J4 779 aa34.88■■■■□ 3.17
SIPA1-210ENST00000534406 PRAG1Q86YV5 1406 aa34.88■■■■□ 3.17
SIPA1-210ENST00000534406 XIRP1Q702N8 1843 aaKnown RBP34.85■■■■□ 3.17
SIPA1-210ENST00000534406 CFAP70Q5T0N1 1121 aa34.85■■■■□ 3.17
SIPA1-210ENST00000534406 KIAA1210Q9ULL0 1709 aa34.84■■■■□ 3.17
SIPA1-210ENST00000534406 PROSER2Q86WR7 435 aaPredicted RBP34.83■■■■□ 3.17
SIPA1-210ENST00000534406 KNDC1Q76NI1 1749 aa34.82■■■■□ 3.16
SIPA1-210ENST00000534406 TMEM94Q12767 1356 aa34.82■■■■□ 3.16
SIPA1-210ENST00000534406 PTCH1Q13635 1447 aa34.81■■■■□ 3.16
SIPA1-210ENST00000534406 ADGRB1O14514 1584 aa34.8■■■■□ 3.16
SIPA1-210ENST00000534406 LRPPRCP42704 1394 aaKnown RBP34.79■■■■□ 3.16
SIPA1-210ENST00000534406 TMEM132EQ6IEE7 984 aa34.78■■■■□ 3.16
SIPA1-210ENST00000534406 YTHDC2Q9H6S0 1430 aaKnown RBP34.78■■■■□ 3.16
SIPA1-210ENST00000534406 TECPR2O15040 1411 aa34.77■■■■□ 3.16
SIPA1-210ENST00000534406 NCOA3Q9Y6Q9 1424 aa34.74■■■■□ 3.15
SIPA1-210ENST00000534406 ABCC11Q96J66 1382 aa34.73■■■■□ 3.15
SIPA1-210ENST00000534406 ROBO2Q9HCK4 1378 aa34.73■■■■□ 3.15
SIPA1-210ENST00000534406 RBM33Q96EV2 1170 aaKnown RBP34.72■■■■□ 3.15
SIPA1-210ENST00000534406 TRPM1Q7Z4N2 1603 aa34.72■■■■□ 3.15
SIPA1-210ENST00000534406 STK26Q9P289 416 aa34.71■■■■□ 3.15
SIPA1-210ENST00000534406 DLC1Q96QB1 1528 aa34.67■■■■□ 3.14
SIPA1-210ENST00000534406 MSH6P52701 1360 aa34.67■■■■□ 3.14
SIPA1-210ENST00000534406 C14orf37Q86TY3 774 aa34.66■■■■□ 3.14
SIPA1-210ENST00000534406 NALCNQ8IZF0 1738 aa34.66■■■■□ 3.14
SIPA1-210ENST00000534406 TIMELESSQ9UNS1 1208 aa34.65■■■■□ 3.14
SIPA1-210ENST00000534406 FAM135BQ49AJ0 1406 aa34.64■■■■□ 3.14
SIPA1-210ENST00000534406 ADGRL3Q9HAR2 1447 aa34.64■■■■□ 3.14
SIPA1-210ENST00000534406 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.61■■■■□ 3.13
SIPA1-210ENST00000534406 NBPF8Q3BBV2 869 aa34.61■■■■□ 3.13
SIPA1-210ENST00000534406 UBAP1LF5GYI3 381 aa34.6■■■■□ 3.13
SIPA1-210ENST00000534406 NBPF1Q3BBV0 1214 aa34.6■■■■□ 3.13
SIPA1-210ENST00000534406 ARHGEF28Q8N1W1 1705 aaKnown RBP34.6■■■■□ 3.13
SIPA1-210ENST00000534406 RALGAPBQ86X10 1494 aa34.58■■■■□ 3.13
SIPA1-210ENST00000534406 DCCP43146 1447 aa34.58■■■■□ 3.13
SIPA1-210ENST00000534406 FBXO41Q8TF61 875 aa34.58■■■■□ 3.13
SIPA1-210ENST00000534406 SIRT1Q96EB6 747 aa34.58■■■■□ 3.13
SIPA1-210ENST00000534406 ROCK2O75116 1388 aaKnown RBP34.58■■■■□ 3.13
SIPA1-210ENST00000534406 TOM1O60784 492 aa34.57■■■■□ 3.12
SIPA1-210ENST00000534406 TRAK1Q9UPV9 953 aa34.57■■■■□ 3.12
SIPA1-210ENST00000534406 C19orf44Q9H6X5 657 aa34.56■■■■□ 3.12
SIPA1-210ENST00000534406 PLEKHH1Q9ULM0 1364 aa34.56■■■■□ 3.12
SIPA1-210ENST00000534406 WAPLQ7Z5K2 1190 aa34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms