RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NUP155O75694 1391 aa21.43■■□□□ 1.02
SF3B2-215ENST00000534307 SETD1AO15047 1707 aaKnown RBP21.41■■□□□ 1.02
SF3B2-215ENST00000534307 NAIPQ13075 1403 aa21.41■■□□□ 1.02
SF3B2-215ENST00000534307 TMEM131LA2VDJ0 1609 aa21.4■■□□□ 1.02
SF3B2-215ENST00000534307 STAG3Q9UJ98 1225 aa21.4■■□□□ 1.02
SF3B2-215ENST00000534307 EID1Q9Y6B2 187 aa21.4■■□□□ 1.02
SF3B2-215ENST00000534307 MYO5BQ9ULV0 1848 aa21.39■■□□□ 1.02
SF3B2-215ENST00000534307 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
SF3B2-215ENST00000534307 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
SF3B2-215ENST00000534307 ROBO1Q9Y6N7 1651 aa21.35■■□□□ 1.01
SF3B2-215ENST00000534307 SPHKAPQ2M3C7 1700 aa21.32■■□□□ 1
SF3B2-215ENST00000534307 RIMS2Q9UQ26 1411 aa21.3■■□□□ 1
SF3B2-215ENST00000534307 POTEAQ6S8J7 498 aa21.3■■□□□ 1
SF3B2-215ENST00000534307 FAM135BQ49AJ0 1406 aa21.29■■□□□ 1
SF3B2-215ENST00000534307 PLEKHG1Q9ULL1 1385 aa21.27■■□□□ 1
SF3B2-215ENST00000534307 SLC26A8Q96RN1 970 aa21.26■□□□□ 0.99
SF3B2-215ENST00000534307 NWD1Q149M9 1564 aa21.26■□□□□ 0.99
SF3B2-215ENST00000534307 TRPM2O94759 1503 aa21.24■□□□□ 0.99
SF3B2-215ENST00000534307 PHLPP1O60346 1717 aa21.23■□□□□ 0.99
SF3B2-215ENST00000534307 KCNA6P17658 529 aa21.22■□□□□ 0.99
SF3B2-215ENST00000534307 CLTCL1P53675 1640 aa21.22■□□□□ 0.99
SF3B2-215ENST00000534307 CHGAP10645 457 aaKnown RBP21.21■□□□□ 0.99
SF3B2-215ENST00000534307 HDGFP51858 240 aaKnown RBP21.21■□□□□ 0.99
SF3B2-215ENST00000534307 TMEM94Q12767 1356 aa21.21■□□□□ 0.99
SF3B2-215ENST00000534307 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
SF3B2-215ENST00000534307 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
SF3B2-215ENST00000534307 CHD2O14647 1828 aaKnown RBP21.2■□□□□ 0.98
SF3B2-215ENST00000534307 ADAMTS13Q76LX8 1427 aa21.2■□□□□ 0.98
SF3B2-215ENST00000534307 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
SF3B2-215ENST00000534307 DIP2AQ14689 1571 aa21.18■□□□□ 0.98
SF3B2-215ENST00000534307 TBX22Q9Y458 520 aa21.17■□□□□ 0.98
SF3B2-215ENST00000534307 NUTM2DQ5VT03 806 aaPredicted RBP21.15■□□□□ 0.98
SF3B2-215ENST00000534307 TRIM52Q96A61 297 aa21.15■□□□□ 0.98
SF3B2-215ENST00000534307 BCANQ96GW7 911 aa21.15■□□□□ 0.98
SF3B2-215ENST00000534307 SRCAPQ6ZRS2 3230 aa21.15■□□□□ 0.98
SF3B2-215ENST00000534307 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
SF3B2-215ENST00000534307 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
SF3B2-215ENST00000534307 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.97
SF3B2-215ENST00000534307 NEXMIFQ5QGS0 1516 aa21.14■□□□□ 0.97
SF3B2-215ENST00000534307 KIF1BO60333 1816 aa21.13■□□□□ 0.97
SF3B2-215ENST00000534307 SLC4A1APQ9BWU0 796 aaKnown RBP21.12■□□□□ 0.97
SF3B2-215ENST00000534307 PIK3R4Q99570 1358 aa21.11■□□□□ 0.97
SF3B2-215ENST00000534307 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
SF3B2-215ENST00000534307 RBM33Q96EV2 1170 aaKnown RBP21.1■□□□□ 0.97
SF3B2-215ENST00000534307 LRP6O75581 1613 aa21.09■□□□□ 0.97
SF3B2-215ENST00000534307 JCADQ9P266 1359 aa21.08■□□□□ 0.96
SF3B2-215ENST00000534307 SHPRHQ149N8 1683 aa21.06■□□□□ 0.96
SF3B2-215ENST00000534307 PTPRUQ92729 1446 aa21.06■□□□□ 0.96
SF3B2-215ENST00000534307 ZNF326Q5BKZ1 582 aaKnown RBP21.06■□□□□ 0.96
SF3B2-215ENST00000534307 NCOA3Q9Y6Q9 1424 aa21.05■□□□□ 0.96
SF3B2-215ENST00000534307 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
SF3B2-215ENST00000534307 MSH6P52701 1360 aa21.04■□□□□ 0.96
SF3B2-215ENST00000534307 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
SF3B2-215ENST00000534307 FOXD1Q16676 465 aa21.03■□□□□ 0.96
SF3B2-215ENST00000534307 MPHOSPH9Q99550 1183 aa21.02■□□□□ 0.96
SF3B2-215ENST00000534307 METP08581 1390 aa21.01■□□□□ 0.95
SF3B2-215ENST00000534307 PPLO60437 1756 aa21.01■□□□□ 0.95
SF3B2-215ENST00000534307 AHDC1Q5TGY3 1603 aaPredicted RBP21■□□□□ 0.95
SF3B2-215ENST00000534307 UPF1Q92900 1129 aaKnown RBP eCLIP21■□□□□ 0.95
SF3B2-215ENST00000534307 SLAIN2Q9P270 581 aa20.99■□□□□ 0.95
SF3B2-215ENST00000534307 AMOTL2Q9Y2J4 779 aa20.99■□□□□ 0.95
SF3B2-215ENST00000534307 ACIN1Q9UKV3 1341 aaKnown RBP20.99■□□□□ 0.95
SF3B2-215ENST00000534307 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.98■□□□□ 0.95
SF3B2-215ENST00000534307 RPGRIP1LQ68CZ1 1315 aa20.98■□□□□ 0.95
SF3B2-215ENST00000534307 CCDC144AA2RUR9 1427 aa20.97■□□□□ 0.95
SF3B2-215ENST00000534307 SPATA31E1Q6ZUB1 1445 aa20.97■□□□□ 0.95
SF3B2-215ENST00000534307 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
SF3B2-215ENST00000534307 VGFO15240 615 aaPredicted RBP20.95■□□□□ 0.94
SF3B2-215ENST00000534307 IFT172Q9UG01 1749 aa20.94■□□□□ 0.94
SF3B2-215ENST00000534307 SPATA31A6Q5VVP1 1343 aa20.94■□□□□ 0.94
SF3B2-215ENST00000534307 C19orf44Q9H6X5 657 aa20.93■□□□□ 0.94
SF3B2-215ENST00000534307 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
SF3B2-215ENST00000534307 DCCP43146 1447 aa20.91■□□□□ 0.94
SF3B2-215ENST00000534307 CDK12Q9NYV4 1490 aaPredicted RBP20.9■□□□□ 0.94
SF3B2-215ENST00000534307 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
SF3B2-215ENST00000534307 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
SF3B2-215ENST00000534307 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
SF3B2-215ENST00000534307 PTCH1Q13635 1447 aa20.88■□□□□ 0.93
SF3B2-215ENST00000534307 MEX3CQ5U5Q3 659 aaKnown RBP20.88■□□□□ 0.93
SF3B2-215ENST00000534307 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
SF3B2-215ENST00000534307 ANKRD30BQ9BXX2 1392 aa20.86■□□□□ 0.93
SF3B2-215ENST00000534307 NHSL1Q5SYE7 1610 aa20.86■□□□□ 0.93
SF3B2-215ENST00000534307 ADGRF5Q8IZF2 1346 aa20.86■□□□□ 0.93
SF3B2-215ENST00000534307 ADGRL3Q9HAR2 1447 aa20.86■□□□□ 0.93
SF3B2-215ENST00000534307 ATF3P18847 181 aa20.85■□□□□ 0.93
SF3B2-215ENST00000534307 EP400Q96L91 3159 aa20.84■□□□□ 0.93
SF3B2-215ENST00000534307 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
SF3B2-215ENST00000534307 ROBO2Q9HCK4 1378 aa20.84■□□□□ 0.93
SF3B2-215ENST00000534307 HRCP23327 699 aa20.83■□□□□ 0.93
SF3B2-215ENST00000534307 PIK3C2GO75747 1445 aa20.83■□□□□ 0.93
SF3B2-215ENST00000534307 MST1RQ04912 1400 aa20.83■□□□□ 0.93
SF3B2-215ENST00000534307 RXRBP28702 533 aa20.81■□□□□ 0.92
SF3B2-215ENST00000534307 ASXL1Q8IXJ9 1541 aa20.81■□□□□ 0.92
SF3B2-215ENST00000534307 RGS12O14924 1447 aa20.8■□□□□ 0.92
SF3B2-215ENST00000534307 NRXN1Q9ULB1 1477 aa20.8■□□□□ 0.92
SF3B2-215ENST00000534307 BRINP3Q76B58 766 aa20.79■□□□□ 0.92
SF3B2-215ENST00000534307 TECPR2O15040 1411 aa20.78■□□□□ 0.92
SF3B2-215ENST00000534307 MYOM2P54296 1465 aa20.78■□□□□ 0.92
SF3B2-215ENST00000534307 AFF2P51816 1311 aa20.77■□□□□ 0.91
SF3B2-215ENST00000534307 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms