RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 PPP1R15AO75807 674 aaPredicted RBP28.32■■■□□ 2.12
PACS1-215ENST00000534273 TRPM2O94759 1503 aa28.32■■■□□ 2.12
PACS1-215ENST00000534273 SLC26A8Q96RN1 970 aa28.31■■■□□ 2.12
PACS1-215ENST00000534273 PLEKHG1Q9ULL1 1385 aa28.31■■■□□ 2.12
PACS1-215ENST00000534273 ACIN1Q9UKV3 1341 aaKnown RBP28.29■■■□□ 2.12
PACS1-215ENST00000534273 BCANQ96GW7 911 aa28.29■■■□□ 2.12
PACS1-215ENST00000534273 MPHOSPH9Q99550 1183 aa28.29■■■□□ 2.12
PACS1-215ENST00000534273 NUTM2DQ5VT03 806 aaPredicted RBP28.28■■■□□ 2.12
PACS1-215ENST00000534273 CLTCL1P53675 1640 aa28.26■■■□□ 2.11
PACS1-215ENST00000534273 FOXD1Q16676 465 aa28.26■■■□□ 2.11
PACS1-215ENST00000534273 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
PACS1-215ENST00000534273 STRCP1A6NGW2 1772 aa28.26■■■□□ 2.11
PACS1-215ENST00000534273 UBAP1LF5GYI3 381 aa28.25■■■□□ 2.11
PACS1-215ENST00000534273 RAB3GAP2Q9H2M9 1393 aa28.24■■■□□ 2.11
PACS1-215ENST00000534273 LRRC7Q96NW7 1537 aa28.24■■■□□ 2.11
PACS1-215ENST00000534273 KCNA6P17658 529 aa28.23■■■□□ 2.11
PACS1-215ENST00000534273 ZNF326Q5BKZ1 582 aaKnown RBP28.23■■■□□ 2.11
PACS1-215ENST00000534273 TBX22Q9Y458 520 aa28.21■■■□□ 2.11
PACS1-215ENST00000534273 ADAMTS13Q76LX8 1427 aa28.18■■■□□ 2.1
PACS1-215ENST00000534273 TOM1O60784 492 aa28.14■■■□□ 2.1
PACS1-215ENST00000534273 HRCP23327 699 aa28.13■■■□□ 2.09
PACS1-215ENST00000534273 PROSER2Q86WR7 435 aaPredicted RBP28.11■■■□□ 2.09
PACS1-215ENST00000534273 NEXMIFQ5QGS0 1516 aa28.11■■■□□ 2.09
PACS1-215ENST00000534273 NWD1Q149M9 1564 aa28.11■■■□□ 2.09
PACS1-215ENST00000534273 KIF1BO60333 1816 aa28.11■■■□□ 2.09
PACS1-215ENST00000534273 CCDC144AA2RUR9 1427 aa28.1■■■□□ 2.09
PACS1-215ENST00000534273 RPGRIP1LQ68CZ1 1315 aa28.1■■■□□ 2.09
PACS1-215ENST00000534273 TMEM94Q12767 1356 aa28.1■■■□□ 2.09
PACS1-215ENST00000534273 DIP2AQ14689 1571 aa28.09■■■□□ 2.09
PACS1-215ENST00000534273 NKTRP30414 1462 aaKnown RBP28.08■■■□□ 2.09
PACS1-215ENST00000534273 PIK3R4Q99570 1358 aa28.08■■■□□ 2.09
PACS1-215ENST00000534273 SETBP1Q9Y6X0 1596 aa28.07■■■□□ 2.08
PACS1-215ENST00000534273 PIP4K2BP78356 416 aa28.06■■■□□ 2.08
PACS1-215ENST00000534273 ALKQ9UM73 1620 aa28.06■■■□□ 2.08
PACS1-215ENST00000534273 VGFO15240 615 aaPredicted RBP28.05■■■□□ 2.08
PACS1-215ENST00000534273 RBM33Q96EV2 1170 aaKnown RBP28.05■■■□□ 2.08
PACS1-215ENST00000534273 NRXN3Q9Y4C0 1643 aa28.03■■■□□ 2.08
PACS1-215ENST00000534273 SPATA31E1Q6ZUB1 1445 aa28.03■■■□□ 2.08
PACS1-215ENST00000534273 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
PACS1-215ENST00000534273 CHD2O14647 1828 aaKnown RBP28.03■■■□□ 2.08
PACS1-215ENST00000534273 XIRP1Q702N8 1843 aaKnown RBP28.01■■■□□ 2.07
PACS1-215ENST00000534273 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
PACS1-215ENST00000534273 RGL3Q3MIN7 710 aa28■■■□□ 2.07
PACS1-215ENST00000534273 AMOTL2Q9Y2J4 779 aa28■■■□□ 2.07
PACS1-215ENST00000534273 METP08581 1390 aa27.99■■■□□ 2.07
PACS1-215ENST00000534273 ANKRD30BQ9BXX2 1392 aa27.96■■■□□ 2.07
PACS1-215ENST00000534273 NCOA3Q9Y6Q9 1424 aa27.93■■■□□ 2.06
PACS1-215ENST00000534273 HSPA1LP34931 641 aa27.93■■■□□ 2.06
PACS1-215ENST00000534273 PPLO60437 1756 aa27.92■■■□□ 2.06
PACS1-215ENST00000534273 MSH6P52701 1360 aa27.92■■■□□ 2.06
PACS1-215ENST00000534273 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
PACS1-215ENST00000534273 XRN1Q8IZH2 1706 aaKnown RBP27.88■■■□□ 2.05
PACS1-215ENST00000534273 C14orf37Q86TY3 774 aa27.87■■■□□ 2.05
PACS1-215ENST00000534273 C19orf44Q9H6X5 657 aa27.85■■■□□ 2.05
PACS1-215ENST00000534273 FAM135BQ49AJ0 1406 aa27.84■■■□□ 2.05
PACS1-215ENST00000534273 SETD1AO15047 1707 aaKnown RBP27.82■■■□□ 2.04
PACS1-215ENST00000534273 SLAIN2Q9P270 581 aa27.82■■■□□ 2.04
PACS1-215ENST00000534273 IFT172Q9UG01 1749 aa27.81■■■□□ 2.04
PACS1-215ENST00000534273 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
PACS1-215ENST00000534273 ATF3P18847 181 aa27.78■■■□□ 2.04
PACS1-215ENST00000534273 CADPS2Q86UW7 1296 aa27.78■■■□□ 2.04
PACS1-215ENST00000534273 PRAG1Q86YV5 1406 aa27.77■■■□□ 2.04
PACS1-215ENST00000534273 ROBO2Q9HCK4 1378 aa27.77■■■□□ 2.04
PACS1-215ENST00000534273 PTCH1Q13635 1447 aa27.76■■■□□ 2.04
PACS1-215ENST00000534273 MYOM2P54296 1465 aa27.76■■■□□ 2.03
PACS1-215ENST00000534273 NRXN1Q9ULB1 1477 aa27.76■■■□□ 2.03
PACS1-215ENST00000534273 C14orf93Q9H972 538 aaKnown RBP27.74■■■□□ 2.03
PACS1-215ENST00000534273 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.74■■■□□ 2.03
PACS1-215ENST00000534273 DCCP43146 1447 aa27.73■■■□□ 2.03
PACS1-215ENST00000534273 TMEM132EQ6IEE7 984 aa27.72■■■□□ 2.03
PACS1-215ENST00000534273 ADGRL3Q9HAR2 1447 aa27.72■■■□□ 2.03
PACS1-215ENST00000534273 LRPPRCP42704 1394 aaKnown RBP27.71■■■□□ 2.03
PACS1-215ENST00000534273 ROBO1Q9Y6N7 1651 aa27.7■■■□□ 2.02
PACS1-215ENST00000534273 TRIM26Q12899 539 aaPredicted RBP27.69■■■□□ 2.02
PACS1-215ENST00000534273 CFAP70Q5T0N1 1121 aa27.69■■■□□ 2.02
PACS1-215ENST00000534273 STK26Q9P289 416 aa27.69■■■□□ 2.02
PACS1-215ENST00000534273 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
PACS1-215ENST00000534273 DCAF11Q8TEB1 546 aa27.68■■■□□ 2.02
PACS1-215ENST00000534273 KDM2AQ9Y2K7 1162 aa27.67■■■□□ 2.02
PACS1-215ENST00000534273 DHX57Q6P158 1386 aaKnown RBP27.67■■■□□ 2.02
PACS1-215ENST00000534273 ABCC11Q96J66 1382 aa27.67■■■□□ 2.02
PACS1-215ENST00000534273 TECPR2O15040 1411 aa27.67■■■□□ 2.02
PACS1-215ENST00000534273 STAC3Q96MF2 364 aa27.66■■■□□ 2.02
PACS1-215ENST00000534273 DISP3Q9P2K9 1392 aa27.65■■■□□ 2.02
PACS1-215ENST00000534273 YTHDC2Q9H6S0 1430 aaKnown RBP27.64■■■□□ 2.02
PACS1-215ENST00000534273 MST1RQ04912 1400 aa27.63■■■□□ 2.01
PACS1-215ENST00000534273 NALCNQ8IZF0 1738 aa27.61■■■□□ 2.01
PACS1-215ENST00000534273 BRINP3Q76B58 766 aa27.61■■■□□ 2.01
PACS1-215ENST00000534273 WAPLQ7Z5K2 1190 aa27.61■■■□□ 2.01
PACS1-215ENST00000534273 SIRT1Q96EB6 747 aa27.59■■■□□ 2.01
PACS1-215ENST00000534273 LAMC1P11047 1609 aa27.58■■■□□ 2.01
PACS1-215ENST00000534273 PLEKHH1Q9ULM0 1364 aa27.57■■■□□ 2
PACS1-215ENST00000534273 KNDC1Q76NI1 1749 aa27.54■■■□□ 2
PACS1-215ENST00000534273 MED1Q15648 1581 aaPredicted RBP27.53■■■□□ 2
PACS1-215ENST00000534273 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
PACS1-215ENST00000534273 ADGRB1O14514 1584 aa27.52■■■□□ 2
PACS1-215ENST00000534273 SIN3AQ96ST3 1273 aa27.52■■■□□ 2
PACS1-215ENST00000534273 AHDC1Q5TGY3 1603 aaPredicted RBP27.52■■■□□ 2
PACS1-215ENST00000534273 PHLPP1O60346 1717 aa27.51■■□□□ 1.99
PACS1-215ENST00000534273 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms