RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
CLP1-206ENST00000533905 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
CLP1-206ENST00000533905 EID1Q9Y6B2 187 aa15.96■□□□□ 0.15
CLP1-206ENST00000533905 ROBO1Q9Y6N7 1651 aa15.95■□□□□ 0.14
CLP1-206ENST00000533905 RIMS2Q9UQ26 1411 aa15.95■□□□□ 0.14
CLP1-206ENST00000533905 RPRD2Q5VT52 1461 aaKnown RBP15.94■□□□□ 0.14
CLP1-206ENST00000533905 IQGAP3Q86VI3 1631 aa15.94■□□□□ 0.14
CLP1-206ENST00000533905 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
CLP1-206ENST00000533905 KCNA6P17658 529 aa15.93■□□□□ 0.14
CLP1-206ENST00000533905 ITGAEP38570 1179 aa15.93■□□□□ 0.14
CLP1-206ENST00000533905 PLEKHG1Q9ULL1 1385 aa15.91■□□□□ 0.14
CLP1-206ENST00000533905 PTPRUQ92729 1446 aa15.91■□□□□ 0.14
CLP1-206ENST00000533905 NKTRP30414 1462 aaKnown RBP15.91■□□□□ 0.14
CLP1-206ENST00000533905 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
CLP1-206ENST00000533905 ROCK1Q13464 1354 aa15.89■□□□□ 0.13
CLP1-206ENST00000533905 PROSER2Q86WR7 435 aaPredicted RBP15.89■□□□□ 0.13
CLP1-206ENST00000533905 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
CLP1-206ENST00000533905 NRXN3Q9Y4C0 1643 aa15.89■□□□□ 0.13
CLP1-206ENST00000533905 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
CLP1-206ENST00000533905 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
CLP1-206ENST00000533905 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
CLP1-206ENST00000533905 NUP155O75694 1391 aa15.86■□□□□ 0.13
CLP1-206ENST00000533905 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
CLP1-206ENST00000533905 BCANQ96GW7 911 aa15.85■□□□□ 0.13
CLP1-206ENST00000533905 LRP6O75581 1613 aa15.83■□□□□ 0.13
CLP1-206ENST00000533905 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.13
CLP1-206ENST00000533905 CLTCL1P53675 1640 aa15.83■□□□□ 0.12
CLP1-206ENST00000533905 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
CLP1-206ENST00000533905 SETD1AO15047 1707 aaKnown RBP15.81■□□□□ 0.12
CLP1-206ENST00000533905 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
CLP1-206ENST00000533905 SPHKAPQ2M3C7 1700 aa15.8■□□□□ 0.12
CLP1-206ENST00000533905 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.8■□□□□ 0.12
CLP1-206ENST00000533905 MSH6P52701 1360 aa15.8■□□□□ 0.12
CLP1-206ENST00000533905 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
CLP1-206ENST00000533905 SLAIN2Q9P270 581 aa15.79■□□□□ 0.12
CLP1-206ENST00000533905 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
CLP1-206ENST00000533905 DIP2AQ14689 1571 aa15.79■□□□□ 0.12
CLP1-206ENST00000533905 NAIPQ13075 1403 aa15.78■□□□□ 0.12
CLP1-206ENST00000533905 METP08581 1390 aa15.78■□□□□ 0.12
CLP1-206ENST00000533905 NEXMIFQ5QGS0 1516 aa15.78■□□□□ 0.12
CLP1-206ENST00000533905 RRBP1Q9P2E9 1410 aaKnown RBP15.77■□□□□ 0.11
CLP1-206ENST00000533905 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
CLP1-206ENST00000533905 TRPM2O94759 1503 aa15.75■□□□□ 0.11
CLP1-206ENST00000533905 AMOTL2Q9Y2J4 779 aa15.74■□□□□ 0.11
CLP1-206ENST00000533905 AHDC1Q5TGY3 1603 aaPredicted RBP15.74■□□□□ 0.11
CLP1-206ENST00000533905 DDX17Q92841 729 aaKnown RBP15.73■□□□□ 0.11
CLP1-206ENST00000533905 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLP1-206ENST00000533905 NALCNQ8IZF0 1738 aa15.71■□□□□ 0.11
CLP1-206ENST00000533905 BRINP3Q76B58 766 aa15.71■□□□□ 0.11
CLP1-206ENST00000533905 JCADQ9P266 1359 aa15.71■□□□□ 0.11
CLP1-206ENST00000533905 MST1RQ04912 1400 aa15.7■□□□□ 0.1
CLP1-206ENST00000533905 ASXL1Q8IXJ9 1541 aa15.7■□□□□ 0.1
CLP1-206ENST00000533905 PIK3R4Q99570 1358 aa15.7■□□□□ 0.1
CLP1-206ENST00000533905 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
CLP1-206ENST00000533905 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
CLP1-206ENST00000533905 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
CLP1-206ENST00000533905 FOXD1Q16676 465 aa15.68■□□□□ 0.1
CLP1-206ENST00000533905 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
CLP1-206ENST00000533905 ZNF326Q5BKZ1 582 aaKnown RBP15.67■□□□□ 0.1
CLP1-206ENST00000533905 C19orf44Q9H6X5 657 aa15.66■□□□□ 0.1
CLP1-206ENST00000533905 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
CLP1-206ENST00000533905 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
CLP1-206ENST00000533905 HFM1A2PYH4 1435 aa15.65■□□□□ 0.1
CLP1-206ENST00000533905 ADGRL3Q9HAR2 1447 aa15.64■□□□□ 0.09
CLP1-206ENST00000533905 HDGFP51858 240 aaKnown RBP15.63■□□□□ 0.09
CLP1-206ENST00000533905 CADPS2Q86UW7 1296 aa15.63■□□□□ 0.09
CLP1-206ENST00000533905 DCCP43146 1447 aa15.62■□□□□ 0.09
CLP1-206ENST00000533905 ATF3P18847 181 aa15.62■□□□□ 0.09
CLP1-206ENST00000533905 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
CLP1-206ENST00000533905 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
CLP1-206ENST00000533905 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
CLP1-206ENST00000533905 KIF1BO60333 1816 aa15.59■□□□□ 0.09
CLP1-206ENST00000533905 EP400Q96L91 3159 aa15.59■□□□□ 0.09
CLP1-206ENST00000533905 PPLO60437 1756 aa15.59■□□□□ 0.09
CLP1-206ENST00000533905 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
CLP1-206ENST00000533905 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
CLP1-206ENST00000533905 TRIM52Q96A61 297 aa15.58■□□□□ 0.08
CLP1-206ENST00000533905 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
CLP1-206ENST00000533905 PNPLA6Q8IY17 1366 aa15.58■□□□□ 0.08
CLP1-206ENST00000533905 PTCH1Q13635 1447 aa15.58■□□□□ 0.08
CLP1-206ENST00000533905 ORAI2Q96SN7 254 aa15.57■□□□□ 0.08
CLP1-206ENST00000533905 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
CLP1-206ENST00000533905 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
CLP1-206ENST00000533905 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
CLP1-206ENST00000533905 PRAG1Q86YV5 1406 aa15.54■□□□□ 0.08
CLP1-206ENST00000533905 PLEKHH1Q9ULM0 1364 aa15.54■□□□□ 0.08
CLP1-206ENST00000533905 AFF2P51816 1311 aa15.54■□□□□ 0.08
CLP1-206ENST00000533905 MEX3CQ5U5Q3 659 aaKnown RBP15.54■□□□□ 0.08
CLP1-206ENST00000533905 LAMC1P11047 1609 aa15.54■□□□□ 0.08
CLP1-206ENST00000533905 RGS12O14924 1447 aa15.53■□□□□ 0.08
CLP1-206ENST00000533905 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
CLP1-206ENST00000533905 UPF1Q92900 1129 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLP1-206ENST00000533905 WAPLQ7Z5K2 1190 aa15.49■□□□□ 0.07
CLP1-206ENST00000533905 C8orf37Q96NL8 207 aa15.49■□□□□ 0.07
CLP1-206ENST00000533905 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
CLP1-206ENST00000533905 XPCQ01831 940 aaPredicted RBP15.48■□□□□ 0.07
CLP1-206ENST00000533905 RGL3Q3MIN7 710 aa15.48■□□□□ 0.07
CLP1-206ENST00000533905 TMEM132EQ6IEE7 984 aa15.48■□□□□ 0.07
CLP1-206ENST00000533905 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
CLP1-206ENST00000533905 SOS2Q07890 1332 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms