RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 HSPA2P54652 639 aa17.19■□□□□ 0.34
COMMD9-208ENST00000533643 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
COMMD9-208ENST00000533643 SLIT1O75093 1534 aa17.19■□□□□ 0.34
COMMD9-208ENST00000533643 NEXMIFQ5QGS0 1516 aa17.18■□□□□ 0.34
COMMD9-208ENST00000533643 LTKP29376 864 aa17.18■□□□□ 0.34
COMMD9-208ENST00000533643 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
COMMD9-208ENST00000533643 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
COMMD9-208ENST00000533643 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
COMMD9-208ENST00000533643 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
COMMD9-208ENST00000533643 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
COMMD9-208ENST00000533643 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD9-208ENST00000533643 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
COMMD9-208ENST00000533643 STAC3Q96MF2 364 aa17.16■□□□□ 0.34
COMMD9-208ENST00000533643 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
COMMD9-208ENST00000533643 ANKLE2Q86XL3 938 aa17.15■□□□□ 0.34
COMMD9-208ENST00000533643 ADGRF5Q8IZF2 1346 aa17.15■□□□□ 0.34
COMMD9-208ENST00000533643 PPLO60437 1756 aa17.14■□□□□ 0.33
COMMD9-208ENST00000533643 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
COMMD9-208ENST00000533643 MYOM2P54296 1465 aa17.13■□□□□ 0.33
COMMD9-208ENST00000533643 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
COMMD9-208ENST00000533643 NCKAP5LQ9HCH0 1330 aa17.13■□□□□ 0.33
COMMD9-208ENST00000533643 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
COMMD9-208ENST00000533643 NRXN1Q9ULB1 1477 aa17.11■□□□□ 0.33
COMMD9-208ENST00000533643 NBPF8Q3BBV2 869 aa17.1■□□□□ 0.33
COMMD9-208ENST00000533643 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
COMMD9-208ENST00000533643 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
COMMD9-208ENST00000533643 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
COMMD9-208ENST00000533643 PIK3C2GO75747 1445 aa17.08■□□□□ 0.32
COMMD9-208ENST00000533643 ZEB1P37275 1124 aaPredicted RBP17.07■□□□□ 0.32
COMMD9-208ENST00000533643 MED14O60244 1454 aa17.06■□□□□ 0.32
COMMD9-208ENST00000533643 BCANQ96GW7 911 aa17.06■□□□□ 0.32
COMMD9-208ENST00000533643 NPHP4O75161 1426 aaPredicted RBP17.05■□□□□ 0.32
COMMD9-208ENST00000533643 CFAP70Q5T0N1 1121 aa17.05■□□□□ 0.32
COMMD9-208ENST00000533643 C14orf93Q9H972 538 aaKnown RBP17.05■□□□□ 0.32
COMMD9-208ENST00000533643 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
COMMD9-208ENST00000533643 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
COMMD9-208ENST00000533643 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
COMMD9-208ENST00000533643 ADAMTS13Q76LX8 1427 aa17.04■□□□□ 0.32
COMMD9-208ENST00000533643 SLC26A8Q96RN1 970 aa17.03■□□□□ 0.32
COMMD9-208ENST00000533643 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
COMMD9-208ENST00000533643 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
COMMD9-208ENST00000533643 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
COMMD9-208ENST00000533643 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
COMMD9-208ENST00000533643 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
COMMD9-208ENST00000533643 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
COMMD9-208ENST00000533643 METP08581 1390 aa16.99■□□□□ 0.31
COMMD9-208ENST00000533643 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
COMMD9-208ENST00000533643 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
COMMD9-208ENST00000533643 KIAA1210Q9ULL0 1709 aa16.97■□□□□ 0.31
COMMD9-208ENST00000533643 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
COMMD9-208ENST00000533643 DIP2AQ14689 1571 aa16.97■□□□□ 0.31
COMMD9-208ENST00000533643 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
COMMD9-208ENST00000533643 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.31
COMMD9-208ENST00000533643 LAMC1P11047 1609 aa16.96■□□□□ 0.3
COMMD9-208ENST00000533643 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
COMMD9-208ENST00000533643 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
COMMD9-208ENST00000533643 GPRASP1Q5JY77 1395 aa16.95■□□□□ 0.3
COMMD9-208ENST00000533643 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
COMMD9-208ENST00000533643 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
COMMD9-208ENST00000533643 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
COMMD9-208ENST00000533643 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
COMMD9-208ENST00000533643 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
COMMD9-208ENST00000533643 STK26Q9P289 416 aa16.91■□□□□ 0.3
COMMD9-208ENST00000533643 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
COMMD9-208ENST00000533643 ABCC11Q96J66 1382 aa16.89■□□□□ 0.3
COMMD9-208ENST00000533643 KCNA6P17658 529 aa16.89■□□□□ 0.29
COMMD9-208ENST00000533643 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
COMMD9-208ENST00000533643 TECPR2O15040 1411 aa16.87■□□□□ 0.29
COMMD9-208ENST00000533643 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
COMMD9-208ENST00000533643 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
COMMD9-208ENST00000533643 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
COMMD9-208ENST00000533643 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
COMMD9-208ENST00000533643 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
COMMD9-208ENST00000533643 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
COMMD9-208ENST00000533643 USP47Q96K76 1375 aa16.84■□□□□ 0.29
COMMD9-208ENST00000533643 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
COMMD9-208ENST00000533643 WAPLQ7Z5K2 1190 aa16.83■□□□□ 0.28
COMMD9-208ENST00000533643 CPS1P31327 1500 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 PLEKHH1Q9ULM0 1364 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 EIF4G2P78344 907 aaKnown RBP eCLIP16.82■□□□□ 0.28
COMMD9-208ENST00000533643 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
COMMD9-208ENST00000533643 HSPA5P11021 654 aaKnown RBP16.81■□□□□ 0.28
COMMD9-208ENST00000533643 PROSER2Q86WR7 435 aaPredicted RBP16.81■□□□□ 0.28
COMMD9-208ENST00000533643 POGKQ9P215 609 aa16.81■□□□□ 0.28
COMMD9-208ENST00000533643 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
COMMD9-208ENST00000533643 EIF3AQ14152 1382 aaKnown RBP16.8■□□□□ 0.28
COMMD9-208ENST00000533643 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
COMMD9-208ENST00000533643 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
COMMD9-208ENST00000533643 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
COMMD9-208ENST00000533643 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.28
COMMD9-208ENST00000533643 RBM33Q96EV2 1170 aaKnown RBP16.78■□□□□ 0.28
COMMD9-208ENST00000533643 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
COMMD9-208ENST00000533643 TESK2Q96S53 571 aa16.76■□□□□ 0.27
COMMD9-208ENST00000533643 LTBP4Q8N2S1 1624 aa16.76■□□□□ 0.27
COMMD9-208ENST00000533643 TMEM94Q12767 1356 aa16.76■□□□□ 0.27
COMMD9-208ENST00000533643 LRRC7Q96NW7 1537 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms