RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 IQGAP1P46940 1657 aa25.2■■□□□ 1.62
FGFR1-239ENST00000533619 CCDC144AA2RUR9 1427 aa25.19■■□□□ 1.62
FGFR1-239ENST00000533619 ZNF326Q5BKZ1 582 aaKnown RBP25.18■■□□□ 1.62
FGFR1-239ENST00000533619 PPP1R15AO75807 674 aaPredicted RBP25.17■■□□□ 1.62
FGFR1-239ENST00000533619 ZFYVE9O95405 1425 aa25.17■■□□□ 1.62
FGFR1-239ENST00000533619 BCANQ96GW7 911 aa25.13■■□□□ 1.61
FGFR1-239ENST00000533619 RPGRIP1LQ68CZ1 1315 aa25.12■■□□□ 1.61
FGFR1-239ENST00000533619 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
FGFR1-239ENST00000533619 ANKRD30BQ9BXX2 1392 aa25.09■■□□□ 1.61
FGFR1-239ENST00000533619 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-239ENST00000533619 NUTM2DQ5VT03 806 aaPredicted RBP25.07■■□□□ 1.6
FGFR1-239ENST00000533619 CERKQ8TCT0 537 aa25.07■■□□□ 1.6
FGFR1-239ENST00000533619 LTBP4Q8N2S1 1624 aa25.06■■□□□ 1.6
FGFR1-239ENST00000533619 VGFO15240 615 aaPredicted RBP25.06■■□□□ 1.6
FGFR1-239ENST00000533619 SLC26A8Q96RN1 970 aa25.04■■□□□ 1.6
FGFR1-239ENST00000533619 SPATA31E1Q6ZUB1 1445 aa25.03■■□□□ 1.6
FGFR1-239ENST00000533619 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
FGFR1-239ENST00000533619 RGL3Q3MIN7 710 aa25.03■■□□□ 1.6
FGFR1-239ENST00000533619 TBX22Q9Y458 520 aa25.03■■□□□ 1.6
FGFR1-239ENST00000533619 CPS1P31327 1500 aa25.01■■□□□ 1.59
FGFR1-239ENST00000533619 PPLO60437 1756 aa24.98■■□□□ 1.59
FGFR1-239ENST00000533619 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
FGFR1-239ENST00000533619 DIP2AQ14689 1571 aa24.97■■□□□ 1.59
FGFR1-239ENST00000533619 KCNA6P17658 529 aa24.97■■□□□ 1.59
FGFR1-239ENST00000533619 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
FGFR1-239ENST00000533619 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
FGFR1-239ENST00000533619 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
FGFR1-239ENST00000533619 PIK3R4Q99570 1358 aa24.94■■□□□ 1.58
FGFR1-239ENST00000533619 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
FGFR1-239ENST00000533619 STRCP1A6NGW2 1772 aa24.92■■□□□ 1.58
FGFR1-239ENST00000533619 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
FGFR1-239ENST00000533619 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
FGFR1-239ENST00000533619 DHX57Q6P158 1386 aaKnown RBP24.91■■□□□ 1.58
FGFR1-239ENST00000533619 STAC3Q96MF2 364 aa24.9■■□□□ 1.58
FGFR1-239ENST00000533619 NRXN3Q9Y4C0 1643 aa24.9■■□□□ 1.58
FGFR1-239ENST00000533619 FBXO41Q8TF61 875 aa24.87■■□□□ 1.57
FGFR1-239ENST00000533619 ADGRF5Q8IZF2 1346 aa24.86■■□□□ 1.57
FGFR1-239ENST00000533619 NWD1Q149M9 1564 aa24.86■■□□□ 1.57
FGFR1-239ENST00000533619 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
FGFR1-239ENST00000533619 NKTRP30414 1462 aaKnown RBP24.85■■□□□ 1.57
FGFR1-239ENST00000533619 PROSER2Q86WR7 435 aaPredicted RBP24.85■■□□□ 1.57
FGFR1-239ENST00000533619 MYOM2P54296 1465 aa24.83■■□□□ 1.57
FGFR1-239ENST00000533619 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
FGFR1-239ENST00000533619 AMOTL2Q9Y2J4 779 aa24.83■■□□□ 1.57
FGFR1-239ENST00000533619 DCAF11Q8TEB1 546 aa24.82■■□□□ 1.56
FGFR1-239ENST00000533619 METP08581 1390 aa24.81■■□□□ 1.56
FGFR1-239ENST00000533619 PIK3C2GO75747 1445 aa24.79■■□□□ 1.56
FGFR1-239ENST00000533619 KDM2AQ9Y2K7 1162 aa24.79■■□□□ 1.56
FGFR1-239ENST00000533619 NRXN1Q9ULB1 1477 aa24.78■■□□□ 1.56
FGFR1-239ENST00000533619 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
FGFR1-239ENST00000533619 TMEM94Q12767 1356 aa24.78■■□□□ 1.56
FGFR1-239ENST00000533619 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
FGFR1-239ENST00000533619 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
FGFR1-239ENST00000533619 TOM1O60784 492 aa24.77■■□□□ 1.56
FGFR1-239ENST00000533619 C14orf93Q9H972 538 aaKnown RBP24.77■■□□□ 1.56
FGFR1-239ENST00000533619 UBAP1LF5GYI3 381 aa24.76■■□□□ 1.55
FGFR1-239ENST00000533619 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
FGFR1-239ENST00000533619 NEUROD1Q13562 356 aa24.75■■□□□ 1.55
FGFR1-239ENST00000533619 XIRP1Q702N8 1843 aaKnown RBP24.75■■□□□ 1.55
FGFR1-239ENST00000533619 ILDR1Q86SU0 546 aaPredicted RBP24.74■■□□□ 1.55
FGFR1-239ENST00000533619 XRN1Q8IZH2 1706 aaKnown RBP24.74■■□□□ 1.55
FGFR1-239ENST00000533619 LAMC1P11047 1609 aa24.73■■□□□ 1.55
FGFR1-239ENST00000533619 CFAP70Q5T0N1 1121 aa24.71■■□□□ 1.55
FGFR1-239ENST00000533619 C14orf37Q86TY3 774 aa24.7■■□□□ 1.54
FGFR1-239ENST00000533619 RBM33Q96EV2 1170 aaKnown RBP24.7■■□□□ 1.54
FGFR1-239ENST00000533619 MSH6P52701 1360 aa24.68■■□□□ 1.54
FGFR1-239ENST00000533619 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
FGFR1-239ENST00000533619 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
FGFR1-239ENST00000533619 PRAG1Q86YV5 1406 aa24.67■■□□□ 1.54
FGFR1-239ENST00000533619 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
FGFR1-239ENST00000533619 C19orf44Q9H6X5 657 aa24.66■■□□□ 1.54
FGFR1-239ENST00000533619 PTCH1Q13635 1447 aa24.66■■□□□ 1.54
FGFR1-239ENST00000533619 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
FGFR1-239ENST00000533619 CLSPNQ9HAW4 1339 aa24.64■■□□□ 1.54
FGFR1-239ENST00000533619 STK26Q9P289 416 aa24.64■■□□□ 1.54
FGFR1-239ENST00000533619 YTHDC2Q9H6S0 1430 aaKnown RBP24.63■■□□□ 1.53
FGFR1-239ENST00000533619 SIRT1Q96EB6 747 aa24.62■■□□□ 1.53
FGFR1-239ENST00000533619 TECPR2O15040 1411 aa24.61■■□□□ 1.53
FGFR1-239ENST00000533619 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
FGFR1-239ENST00000533619 ATF3P18847 181 aa24.61■■□□□ 1.53
FGFR1-239ENST00000533619 ROBO2Q9HCK4 1378 aa24.61■■□□□ 1.53
FGFR1-239ENST00000533619 TONSLQ96HA7 1378 aa24.6■■□□□ 1.53
FGFR1-239ENST00000533619 PIP4K2BP78356 416 aa24.6■■□□□ 1.53
FGFR1-239ENST00000533619 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
FGFR1-239ENST00000533619 KNDC1Q76NI1 1749 aa24.6■■□□□ 1.53
FGFR1-239ENST00000533619 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
FGFR1-239ENST00000533619 KIAA1210Q9ULL0 1709 aa24.59■■□□□ 1.53
FGFR1-239ENST00000533619 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.52
FGFR1-239ENST00000533619 ADGRB1O14514 1584 aa24.56■■□□□ 1.52
FGFR1-239ENST00000533619 DCCP43146 1447 aa24.56■■□□□ 1.52
FGFR1-239ENST00000533619 ADGRL3Q9HAR2 1447 aa24.56■■□□□ 1.52
FGFR1-239ENST00000533619 SLAIN2Q9P270 581 aa24.56■■□□□ 1.52
FGFR1-239ENST00000533619 FAM135BQ49AJ0 1406 aa24.55■■□□□ 1.52
FGFR1-239ENST00000533619 CCER1Q8TC90 406 aaPredicted RBP24.55■■□□□ 1.52
FGFR1-239ENST00000533619 WAPLQ7Z5K2 1190 aa24.53■■□□□ 1.52
FGFR1-239ENST00000533619 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
FGFR1-239ENST00000533619 POGKQ9P215 609 aa24.51■■□□□ 1.51
FGFR1-239ENST00000533619 TRAK1Q9UPV9 953 aa24.51■■□□□ 1.51
FGFR1-239ENST00000533619 NALCNQ8IZF0 1738 aa24.51■■□□□ 1.51
FGFR1-239ENST00000533619 TIMELESSQ9UNS1 1208 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms