RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TEFQ10587 303 aa21.81■■□□□ 1.08
PHRF1-205ENST00000533464 TROQ12816 1431 aaPredicted RBP21.81■■□□□ 1.08
PHRF1-205ENST00000533464 ST18O60284 1047 aa21.81■■□□□ 1.08
PHRF1-205ENST00000533464 C9orf84Q5VXU9 1444 aa21.8■■□□□ 1.08
PHRF1-205ENST00000533464 KIAA1107Q9UPP5 1409 aa21.8■■□□□ 1.08
PHRF1-205ENST00000533464 GOLGA6L3A6NEY3 463 aa21.8■■□□□ 1.08
PHRF1-205ENST00000533464 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
PHRF1-205ENST00000533464 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
PHRF1-205ENST00000533464 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
PHRF1-205ENST00000533464 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
PHRF1-205ENST00000533464 MTHFSP49914 203 aa21.78■■□□□ 1.08
PHRF1-205ENST00000533464 C1orf141Q5JVX7 400 aa21.78■■□□□ 1.08
PHRF1-205ENST00000533464 CHAF1AQ13111 956 aaPredicted RBP21.78■■□□□ 1.08
PHRF1-205ENST00000533464 RILPL2Q969X0 211 aa21.78■■□□□ 1.08
PHRF1-205ENST00000533464 SYAP1Q96A49 352 aaPredicted RBP21.78■■□□□ 1.08
PHRF1-205ENST00000533464 HMOX1P09601 288 aa21.78■■□□□ 1.08
PHRF1-205ENST00000533464 CCDC9Q9Y3X0 531 aaKnown RBP21.78■■□□□ 1.08
PHRF1-205ENST00000533464 FANCIQ9NVI1 1328 aa21.77■■□□□ 1.08
PHRF1-205ENST00000533464 API5Q9BZZ5 524 aaKnown RBP21.76■■□□□ 1.07
PHRF1-205ENST00000533464 EIF2S2P20042 333 aaKnown RBP21.75■■□□□ 1.07
PHRF1-205ENST00000533464 PPP2R1AP30153 589 aa21.75■■□□□ 1.07
PHRF1-205ENST00000533464 HTATSF1O43719 755 aaKnown RBP21.75■■□□□ 1.07
PHRF1-205ENST00000533464 ISY1Q9ULR0 285 aaKnown RBP21.75■■□□□ 1.07
PHRF1-205ENST00000533464 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
PHRF1-205ENST00000533464 PANK1Q8TE04 598 aa21.74■■□□□ 1.07
PHRF1-205ENST00000533464 NECTIN2Q92692 538 aa21.74■■□□□ 1.07
PHRF1-205ENST00000533464 USP35Q9P2H5 1018 aa21.74■■□□□ 1.07
PHRF1-205ENST00000533464 TCP11L2Q8N4U5 519 aa21.73■■□□□ 1.07
PHRF1-205ENST00000533464 FOXD4L5Q5VV16 416 aaPredicted RBP21.72■■□□□ 1.07
PHRF1-205ENST00000533464 FOXD4L4Q8WXT5 416 aaPredicted RBP21.72■■□□□ 1.07
PHRF1-205ENST00000533464 SNAPC4Q5SXM2 1469 aa21.72■■□□□ 1.07
PHRF1-205ENST00000533464 GNAI1P63096 354 aa21.72■■□□□ 1.07
PHRF1-205ENST00000533464 DAPK1P53355 1430 aa21.71■■□□□ 1.07
PHRF1-205ENST00000533464 KIF16BQ96L93 1317 aa21.71■■□□□ 1.07
PHRF1-205ENST00000533464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.062e-6■■■□□ 15.2
PHRF1-205ENST00000533464 PSME1Q06323 249 aa21.7■■□□□ 1.06
PHRF1-205ENST00000533464 DNMBPQ6XZF7 1577 aa21.7■■□□□ 1.06
PHRF1-205ENST00000533464 KIAA2012Q0VF49 1180 aa21.69■■□□□ 1.06
PHRF1-205ENST00000533464 NAIPQ13075 1403 aa21.69■■□□□ 1.06
PHRF1-205ENST00000533464 FKBP5Q13451 457 aaPredicted RBP21.68■■□□□ 1.06
PHRF1-205ENST00000533464 SLC12A5Q9H2X9 1139 aa21.68■■□□□ 1.06
PHRF1-205ENST00000533464 SCAPERQ9BY12 1400 aa21.68■■□□□ 1.06
PHRF1-205ENST00000533464 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
PHRF1-205ENST00000533464 C9orf78Q9NZ63 289 aaPredicted RBP21.67■■□□□ 1.06
PHRF1-205ENST00000533464 LNPKQ9C0E8 428 aa21.66■■□□□ 1.06
PHRF1-205ENST00000533464 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
PHRF1-205ENST00000533464 CCDC184Q52MB2 194 aa21.66■■□□□ 1.06
PHRF1-205ENST00000533464 DDX11L8A8MPP1 907 aa21.66■■□□□ 1.06
PHRF1-205ENST00000533464 TSPYL4Q9UJ04 414 aa21.65■■□□□ 1.06
PHRF1-205ENST00000533464 NEXNQ0ZGT2 675 aa21.65■■□□□ 1.06
PHRF1-205ENST00000533464 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
PHRF1-205ENST00000533464 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
PHRF1-205ENST00000533464 CDK13Q14004 1512 aaKnown RBP21.64■■□□□ 1.06
PHRF1-205ENST00000533464 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.06
PHRF1-205ENST00000533464 CSPP1Q1MSJ5 1256 aa21.64■■□□□ 1.05
PHRF1-205ENST00000533464 TTC5Q8N0Z6 440 aa21.64■■□□□ 1.05
PHRF1-205ENST00000533464 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.05
PHRF1-205ENST00000533464 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
PHRF1-205ENST00000533464 REC8O95072 547 aa21.63■■□□□ 1.05
PHRF1-205ENST00000533464 KIAA0586Q9BVV6 1533 aa21.62■■□□□ 1.05
PHRF1-205ENST00000533464 GTF2E1P29083 439 aaPredicted RBP21.62■■□□□ 1.05
PHRF1-205ENST00000533464 DDX49Q9Y6V7 483 aaKnown RBP21.62■■□□□ 1.05
PHRF1-205ENST00000533464 DIAPH3Q9NSV4 1193 aa21.62■■□□□ 1.05
PHRF1-205ENST00000533464 NUTM2GQ5VZR2 741 aa21.61■■□□□ 1.05
PHRF1-205ENST00000533464 AAMPQ13685 434 aa21.61■■□□□ 1.05
PHRF1-205ENST00000533464 EVA1CP58658 441 aa21.61■■□□□ 1.05
PHRF1-205ENST00000533464 TOMM22Q9NS69 142 aa21.61■■□□□ 1.05
PHRF1-205ENST00000533464 NLRP6P59044 892 aa21.6■■□□□ 1.05
PHRF1-205ENST00000533464 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
PHRF1-205ENST00000533464 FOXD4L6Q3SYB3 417 aaPredicted RBP21.6■■□□□ 1.05
PHRF1-205ENST00000533464 FOXD4L3Q6VB84 417 aaPredicted RBP21.6■■□□□ 1.05
PHRF1-205ENST00000533464 GSE1Q14687 1217 aa21.6■■□□□ 1.05
PHRF1-205ENST00000533464 SUPT6HQ7KZ85 1726 aaKnown RBP21.59■■□□□ 1.05
PHRF1-205ENST00000533464 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
PHRF1-205ENST00000533464 PRKAR2BP31323 418 aa21.59■■□□□ 1.05
PHRF1-205ENST00000533464 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.04
PHRF1-205ENST00000533464 KIF3AQ9Y496 699 aa21.58■■□□□ 1.04
PHRF1-205ENST00000533464 FRAT2O75474 233 aaPredicted RBP21.57■■□□□ 1.04
PHRF1-205ENST00000533464 EXOSC9Q06265 439 aaKnown RBP21.57■■□□□ 1.04
PHRF1-205ENST00000533464 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
PHRF1-205ENST00000533464 RAPGEF3O95398 923 aa21.56■■□□□ 1.04
PHRF1-205ENST00000533464 DDX58O95786 925 aaKnown RBP21.56■■□□□ 1.04
PHRF1-205ENST00000533464 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
PHRF1-205ENST00000533464 PHF14O94880 888 aa21.55■■□□□ 1.04
PHRF1-205ENST00000533464 RUFY2Q8WXA3 655 aa21.55■■□□□ 1.04
PHRF1-205ENST00000533464 ANO2Q9NQ90 1003 aa21.55■■□□□ 1.04
PHRF1-205ENST00000533464 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
PHRF1-205ENST00000533464 ERBINQ96RT1 1412 aa21.55■■□□□ 1.04
PHRF1-205ENST00000533464 PCF11O94913 1555 aaKnown RBP21.54■■□□□ 1.04
PHRF1-205ENST00000533464 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
PHRF1-205ENST00000533464 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
PHRF1-205ENST00000533464 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
PHRF1-205ENST00000533464 BCAR3O75815 825 aa21.53■■□□□ 1.04
PHRF1-205ENST00000533464 CHMP5Q9NZZ3 219 aa21.53■■□□□ 1.04
PHRF1-205ENST00000533464 SF3A1Q15459 793 aaKnown RBP21.53■■□□□ 1.04
PHRF1-205ENST00000533464 ZKSCAN1P17029 563 aaPredicted RBP21.52■■□□□ 1.04
PHRF1-205ENST00000533464 SKOR2Q2VWA4 1001 aaPredicted RBP21.52■■□□□ 1.04
PHRF1-205ENST00000533464 RAPGEF4Q8WZA2 1011 aa21.52■■□□□ 1.04
PHRF1-205ENST00000533464 CCDC34Q96HJ3 373 aa21.52■■□□□ 1.04
PHRF1-205ENST00000533464 TMX4Q9H1E5 349 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms