RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 FOXD4L4Q8WXT5 416 aaPredicted RBP9.62□□□□□ -0.87
CSRP1-218ENST00000533402 USP8P40818 1118 aa9.62□□□□□ -0.87
CSRP1-218ENST00000533402 OS9Q13438 667 aaPredicted RBP9.62□□□□□ -0.87
CSRP1-218ENST00000533402 CGNQ9P2M7 1197 aaKnown RBP9.62□□□□□ -0.87
CSRP1-218ENST00000533402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.61□□□□□ -0.87
CSRP1-218ENST00000533402 MNS1Q8NEH6 495 aa9.61□□□□□ -0.87
CSRP1-218ENST00000533402 AK7Q96M32 723 aa9.61□□□□□ -0.87
CSRP1-218ENST00000533402 ROCK2O75116 1388 aaKnown RBP9.61□□□□□ -0.87
CSRP1-218ENST00000533402 ITSN2Q9NZM3 1697 aa9.61□□□□□ -0.87
CSRP1-218ENST00000533402 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
CSRP1-218ENST00000533402 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
CSRP1-218ENST00000533402 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
CSRP1-218ENST00000533402 CCDC173Q0VFZ6 552 aa9.6□□□□□ -0.87
CSRP1-218ENST00000533402 CC2D1BQ5T0F9 858 aaKnown RBP9.6□□□□□ -0.87
CSRP1-218ENST00000533402 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
CSRP1-218ENST00000533402 CENPQQ7L2Z9 268 aaPredicted RBP9.6□□□□□ -0.87
CSRP1-218ENST00000533402 ERICH4A6NGS2 130 aa9.6□□□□□ -0.87
CSRP1-218ENST00000533402 BECN2A8MW95 431 aa9.6□□□□□ -0.87
CSRP1-218ENST00000533402 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
CSRP1-218ENST00000533402 RRP7BPQ9NSQ0 103 aa9.6□□□□□ -0.87
CSRP1-218ENST00000533402 E9PSI1 815 aa9.6□□□□□ -0.87
CSRP1-218ENST00000533402 ESPNB1AK53 854 aa9.59□□□□□ -0.87
CSRP1-218ENST00000533402 GPATCH11Q8N954 259 aa9.59□□□□□ -0.87
CSRP1-218ENST00000533402 BCL11BQ9C0K0 894 aaPredicted RBP9.59□□□□□ -0.87
CSRP1-218ENST00000533402 PHF23Q9BUL5 403 aaPredicted RBP9.59□□□□□ -0.87
CSRP1-218ENST00000533402 HMMRO75330 724 aa9.58□□□□□ -0.88
CSRP1-218ENST00000533402 RUFY1Q96T51 708 aa9.58□□□□□ -0.88
CSRP1-218ENST00000533402 SPAG9O60271 1321 aaKnown RBP9.58□□□□□ -0.88
CSRP1-218ENST00000533402 LRRC9Q6ZRR7 1453 aa9.58□□□□□ -0.88
CSRP1-218ENST00000533402 FRAT2O75474 233 aaPredicted RBP9.58□□□□□ -0.88
CSRP1-218ENST00000533402 CARD11Q9BXL7 1154 aa9.58□□□□□ -0.88
CSRP1-218ENST00000533402 CCDC34Q96HJ3 373 aa9.58□□□□□ -0.88
CSRP1-218ENST00000533402 KIF14Q15058 1648 aa9.58□□□□□ -0.88
CSRP1-218ENST00000533402 NEFHP12036 1026 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 CDR1P51861 262 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 GIMAP7Q8NHV1 300 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 TIAM1Q13009 1591 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 KIF3AQ9Y496 699 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 TRAK2O60296 914 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 DYDC1Q8WWB3 177 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 ATP6V1DQ9Y5K8 247 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 CALCOCO1Q9P1Z2 691 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 HSP90B1P14625 803 aaKnown RBP9.57□□□□□ -0.88
CSRP1-218ENST00000533402 SNAPC4Q5SXM2 1469 aa9.57□□□□□ -0.88
CSRP1-218ENST00000533402 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
CSRP1-218ENST00000533402 SRPK2P78362 688 aaKnown RBP9.56□□□□□ -0.88
CSRP1-218ENST00000533402 NOL8Q76FK4 1167 aaKnown RBP9.56□□□□□ -0.88
CSRP1-218ENST00000533402 RTF1Q92541 710 aaKnown RBP9.56□□□□□ -0.88
CSRP1-218ENST00000533402 CBX1P83916 185 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
CSRP1-218ENST00000533402 MLECQ14165 292 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 PAXIP1Q6ZW49 1069 aaPredicted RBP9.55□□□□□ -0.88
CSRP1-218ENST00000533402 PRM3Q9NNZ6 103 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 NESP48681 1621 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 FGD6Q6ZV73 1430 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 SCAPERQ9BY12 1400 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 APBB1O00213 710 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 IPO8O15397 1037 aaKnown RBP9.55□□□□□ -0.88
CSRP1-218ENST00000533402 RBM25P49756 843 aaKnown RBP9.55□□□□□ -0.88
CSRP1-218ENST00000533402 FOXD4L6Q3SYB3 417 aaPredicted RBP9.55□□□□□ -0.88
CSRP1-218ENST00000533402 FOXD4L3Q6VB84 417 aaPredicted RBP9.55□□□□□ -0.88
CSRP1-218ENST00000533402 ITPRIPQ8IWB1 547 aa9.55□□□□□ -0.88
CSRP1-218ENST00000533402 TSR1Q2NL82 804 aaKnown RBP9.54□□□□□ -0.88
CSRP1-218ENST00000533402 GRIN2AQ12879 1464 aa9.54□□□□□ -0.88
CSRP1-218ENST00000533402 CREBRFQ8IUR6 639 aa9.54□□□□□ -0.88
CSRP1-218ENST00000533402 TPD52L1Q16890 204 aaPredicted RBP9.54□□□□□ -0.88
CSRP1-218ENST00000533402 PDCL2Q8N4E4 241 aa9.54□□□□□ -0.88
CSRP1-218ENST00000533402 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
CSRP1-218ENST00000533402 DNAJC2Q99543 621 aaKnown RBP9.54□□□□□ -0.88
CSRP1-218ENST00000533402 WDR62O43379 1518 aa9.54□□□□□ -0.88
CSRP1-218ENST00000533402 ERCC4Q92889 916 aaPredicted RBP9.54□□□□□ -0.88
CSRP1-218ENST00000533402 KIAA0754O94854 1291 aa9.54□□□□□ -0.88
CSRP1-218ENST00000533402 TPM1P09493 284 aa9.53□□□□□ -0.88
CSRP1-218ENST00000533402 TMF1P82094 1093 aa9.53□□□□□ -0.88
CSRP1-218ENST00000533402 NUP155O75694 1391 aa9.53□□□□□ -0.88
CSRP1-218ENST00000533402 ZNF526Q8TF50 670 aaPredicted RBP9.53□□□□□ -0.88
CSRP1-218ENST00000533402 SKIDA1Q1XH10 827 aa9.53□□□□□ -0.88
CSRP1-218ENST00000533402 MCTP1Q6DN14 999 aa9.52□□□□□ -0.88
CSRP1-218ENST00000533402 IPO4Q8TEX9 1081 aaKnown RBP9.52□□□□□ -0.88
CSRP1-218ENST00000533402 GRPEL1Q9HAV7 217 aa9.52□□□□□ -0.88
CSRP1-218ENST00000533402 TROQ12816 1431 aaPredicted RBP9.52□□□□□ -0.88
CSRP1-218ENST00000533402 TNNT1P13805 278 aa9.52□□□□□ -0.88
CSRP1-218ENST00000533402 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.88
CSRP1-218ENST00000533402 CWC22Q9HCG8 908 aaKnown RBP9.52□□□□□ -0.89
CSRP1-218ENST00000533402 GTF2E1P29083 439 aaPredicted RBP9.52□□□□□ -0.89
CSRP1-218ENST00000533402 EXOC6Q8TAG9 804 aa9.52□□□□□ -0.89
CSRP1-218ENST00000533402 PDE3BQ13370 1112 aa9.52□□□□□ -0.89
CSRP1-218ENST00000533402 PRG4Q92954 1404 aaPredicted RBP9.52□□□□□ -0.89
CSRP1-218ENST00000533402 CCDC144AA2RUR9 1427 aa9.52□□□□□ -0.89
CSRP1-218ENST00000533402 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
CSRP1-218ENST00000533402 RNF214Q8ND24 703 aa9.51□□□□□ -0.89
CSRP1-218ENST00000533402 SENP3Q9H4L4 574 aaPredicted RBP9.51□□□□□ -0.89
CSRP1-218ENST00000533402 GTF2A1P52655 376 aaPredicted RBP9.51□□□□□ -0.89
CSRP1-218ENST00000533402 RRP1P56182 461 aaKnown RBP9.51□□□□□ -0.89
CSRP1-218ENST00000533402 RAB3GAP2Q9H2M9 1393 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 NUCB2P80303 420 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 NCOA2Q15596 1464 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 ZBED9Q6R2W3 1325 aa9.5□□□□□ -0.89
CSRP1-218ENST00000533402 MSH5O43196 834 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms