RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SPHKAPQ2M3C7 1700 aa19.29■□□□□ 0.68
TRAPPC4-212ENST00000533058 PPP1R15AO75807 674 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-212ENST00000533058 KCNA6P17658 529 aa19.29■□□□□ 0.68
TRAPPC4-212ENST00000533058 TRPM2O94759 1503 aa19.29■□□□□ 0.68
TRAPPC4-212ENST00000533058 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
TRAPPC4-212ENST00000533058 TOM1O60784 492 aa19.28■□□□□ 0.68
TRAPPC4-212ENST00000533058 SLC26A8Q96RN1 970 aa19.28■□□□□ 0.68
TRAPPC4-212ENST00000533058 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
TRAPPC4-212ENST00000533058 STRCP1A6NGW2 1772 aa19.27■□□□□ 0.67
TRAPPC4-212ENST00000533058 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
TRAPPC4-212ENST00000533058 TRIM26Q12899 539 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC4-212ENST00000533058 MYO5BQ9ULV0 1848 aa19.25■□□□□ 0.67
TRAPPC4-212ENST00000533058 BCANQ96GW7 911 aa19.25■□□□□ 0.67
TRAPPC4-212ENST00000533058 MPHOSPH9Q99550 1183 aa19.23■□□□□ 0.67
TRAPPC4-212ENST00000533058 ADAMTS13Q76LX8 1427 aa19.22■□□□□ 0.67
TRAPPC4-212ENST00000533058 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
TRAPPC4-212ENST00000533058 PIK3R4Q99570 1358 aa19.21■□□□□ 0.67
TRAPPC4-212ENST00000533058 NWD1Q149M9 1564 aa19.2■□□□□ 0.66
TRAPPC4-212ENST00000533058 HRCP23327 699 aa19.2■□□□□ 0.66
TRAPPC4-212ENST00000533058 ZNF326Q5BKZ1 582 aaKnown RBP19.2■□□□□ 0.66
TRAPPC4-212ENST00000533058 NUTM2DQ5VT03 806 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC4-212ENST00000533058 NKTRP30414 1462 aaKnown RBP19.2■□□□□ 0.66
TRAPPC4-212ENST00000533058 DIP2AQ14689 1571 aa19.19■□□□□ 0.66
TRAPPC4-212ENST00000533058 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
TRAPPC4-212ENST00000533058 TMEM94Q12767 1356 aa19.18■□□□□ 0.66
TRAPPC4-212ENST00000533058 PROSER2Q86WR7 435 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC4-212ENST00000533058 RAB3GAP2Q9H2M9 1393 aa19.17■□□□□ 0.66
TRAPPC4-212ENST00000533058 ALKQ9UM73 1620 aa19.16■□□□□ 0.66
TRAPPC4-212ENST00000533058 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC4-212ENST00000533058 FOXD1Q16676 465 aa19.15■□□□□ 0.66
TRAPPC4-212ENST00000533058 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
TRAPPC4-212ENST00000533058 NEXMIFQ5QGS0 1516 aa19.15■□□□□ 0.66
TRAPPC4-212ENST00000533058 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
TRAPPC4-212ENST00000533058 PIP4K2BP78356 416 aa19.14■□□□□ 0.65
TRAPPC4-212ENST00000533058 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.65
TRAPPC4-212ENST00000533058 KIF1BO60333 1816 aa19.14■□□□□ 0.65
TRAPPC4-212ENST00000533058 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
TRAPPC4-212ENST00000533058 SENP3Q9H4L4 574 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC4-212ENST00000533058 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
TRAPPC4-212ENST00000533058 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
TRAPPC4-212ENST00000533058 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
TRAPPC4-212ENST00000533058 NRXN3Q9Y4C0 1643 aa19.1■□□□□ 0.65
TRAPPC4-212ENST00000533058 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.65
TRAPPC4-212ENST00000533058 HSPA1LP34931 641 aa19.08■□□□□ 0.64
TRAPPC4-212ENST00000533058 FAM135BQ49AJ0 1406 aa19.08■□□□□ 0.64
TRAPPC4-212ENST00000533058 PTPRUQ92729 1446 aa19.08■□□□□ 0.64
TRAPPC4-212ENST00000533058 MSH6P52701 1360 aa19.07■□□□□ 0.64
TRAPPC4-212ENST00000533058 PCGF6Q9BYE7 350 aa19.07■□□□□ 0.64
TRAPPC4-212ENST00000533058 METP08581 1390 aa19.06■□□□□ 0.64
TRAPPC4-212ENST00000533058 RBM33Q96EV2 1170 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-212ENST00000533058 ANKRD30BQ9BXX2 1392 aa19.05■□□□□ 0.64
TRAPPC4-212ENST00000533058 C19orf44Q9H6X5 657 aa19.04■□□□□ 0.64
TRAPPC4-212ENST00000533058 XRN1Q8IZH2 1706 aaKnown RBP19.01■□□□□ 0.63
TRAPPC4-212ENST00000533058 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
TRAPPC4-212ENST00000533058 SLAIN2Q9P270 581 aa19.01■□□□□ 0.63
TRAPPC4-212ENST00000533058 PPLO60437 1756 aa19.01■□□□□ 0.63
TRAPPC4-212ENST00000533058 PRAG1Q86YV5 1406 aa19■□□□□ 0.63
TRAPPC4-212ENST00000533058 CADPS2Q86UW7 1296 aa19■□□□□ 0.63
TRAPPC4-212ENST00000533058 ADGRF5Q8IZF2 1346 aa18.99■□□□□ 0.63
TRAPPC4-212ENST00000533058 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
TRAPPC4-212ENST00000533058 DCCP43146 1447 aa18.98■□□□□ 0.63
TRAPPC4-212ENST00000533058 ATF3P18847 181 aa18.96■□□□□ 0.63
TRAPPC4-212ENST00000533058 PTCH1Q13635 1447 aa18.96■□□□□ 0.63
TRAPPC4-212ENST00000533058 SETD1AO15047 1707 aaKnown RBP18.95■□□□□ 0.62
TRAPPC4-212ENST00000533058 PIK3C2GO75747 1445 aa18.94■□□□□ 0.62
TRAPPC4-212ENST00000533058 DISP3Q9P2K9 1392 aa18.93■□□□□ 0.62
TRAPPC4-212ENST00000533058 STAC3Q96MF2 364 aa18.93■□□□□ 0.62
TRAPPC4-212ENST00000533058 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
TRAPPC4-212ENST00000533058 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC4-212ENST00000533058 IFT172Q9UG01 1749 aa18.92■□□□□ 0.62
TRAPPC4-212ENST00000533058 ADGRL3Q9HAR2 1447 aa18.91■□□□□ 0.62
TRAPPC4-212ENST00000533058 MYOM2P54296 1465 aa18.91■□□□□ 0.62
TRAPPC4-212ENST00000533058 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
TRAPPC4-212ENST00000533058 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
TRAPPC4-212ENST00000533058 C14orf93Q9H972 538 aaKnown RBP18.9■□□□□ 0.62
TRAPPC4-212ENST00000533058 LRPPRCP42704 1394 aaKnown RBP18.89■□□□□ 0.61
TRAPPC4-212ENST00000533058 ABCC11Q96J66 1382 aa18.89■□□□□ 0.61
TRAPPC4-212ENST00000533058 TECPR2O15040 1411 aa18.89■□□□□ 0.61
TRAPPC4-212ENST00000533058 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
TRAPPC4-212ENST00000533058 MST1RQ04912 1400 aa18.86■□□□□ 0.61
TRAPPC4-212ENST00000533058 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
TRAPPC4-212ENST00000533058 CFAP70Q5T0N1 1121 aa18.83■□□□□ 0.6
TRAPPC4-212ENST00000533058 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
TRAPPC4-212ENST00000533058 ASXL1Q8IXJ9 1541 aa18.83■□□□□ 0.6
TRAPPC4-212ENST00000533058 YTHDC2Q9H6S0 1430 aaKnown RBP18.83■□□□□ 0.6
TRAPPC4-212ENST00000533058 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC4-212ENST00000533058 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
TRAPPC4-212ENST00000533058 DCAF11Q8TEB1 546 aa18.81■□□□□ 0.6
TRAPPC4-212ENST00000533058 LAMC1P11047 1609 aa18.81■□□□□ 0.6
TRAPPC4-212ENST00000533058 AHDC1Q5TGY3 1603 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC4-212ENST00000533058 JCADQ9P266 1359 aa18.81■□□□□ 0.6
TRAPPC4-212ENST00000533058 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
TRAPPC4-212ENST00000533058 STK26Q9P289 416 aa18.8■□□□□ 0.6
TRAPPC4-212ENST00000533058 C1orf167Q5SNV9 1468 aa18.79■□□□□ 0.6
TRAPPC4-212ENST00000533058 PHLPP1O60346 1717 aa18.77■□□□□ 0.6
TRAPPC4-212ENST00000533058 KNDC1Q76NI1 1749 aa18.77■□□□□ 0.6
TRAPPC4-212ENST00000533058 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
TRAPPC4-212ENST00000533058 KDM2AQ9Y2K7 1162 aa18.77■□□□□ 0.6
TRAPPC4-212ENST00000533058 COL16A1Q07092 1604 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC4-212ENST00000533058 ILDR2Q71H61 639 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms