RNA–Protein interactions for RNA: ENST00000533039.2

SOX9-AS1-210, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-210ENST00000533039 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
SOX9-AS1-210ENST00000533039 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
SOX9-AS1-210ENST00000533039 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
SOX9-AS1-210ENST00000533039 NUP155O75694 1391 aa13.31□□□□□ -0.28
SOX9-AS1-210ENST00000533039 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
SOX9-AS1-210ENST00000533039 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
SOX9-AS1-210ENST00000533039 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
SOX9-AS1-210ENST00000533039 BCANQ96GW7 911 aa13.29□□□□□ -0.28
SOX9-AS1-210ENST00000533039 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
SOX9-AS1-210ENST00000533039 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
SOX9-AS1-210ENST00000533039 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.28
SOX9-AS1-210ENST00000533039 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.29
SOX9-AS1-210ENST00000533039 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.29
SOX9-AS1-210ENST00000533039 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
SOX9-AS1-210ENST00000533039 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
SOX9-AS1-210ENST00000533039 NWD1Q149M9 1564 aa13.25□□□□□ -0.29
SOX9-AS1-210ENST00000533039 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
SOX9-AS1-210ENST00000533039 KCNA6P17658 529 aa13.25□□□□□ -0.29
SOX9-AS1-210ENST00000533039 HSPA1LP34931 641 aa13.25□□□□□ -0.29
SOX9-AS1-210ENST00000533039 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
SOX9-AS1-210ENST00000533039 NKTRP30414 1462 aaKnown RBP13.24□□□□□ -0.29
SOX9-AS1-210ENST00000533039 KIF1BO60333 1816 aa13.24□□□□□ -0.29
SOX9-AS1-210ENST00000533039 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
SOX9-AS1-210ENST00000533039 DIP2AQ14689 1571 aa13.23□□□□□ -0.29
SOX9-AS1-210ENST00000533039 NAIPQ13075 1403 aa13.22□□□□□ -0.29
SOX9-AS1-210ENST00000533039 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
SOX9-AS1-210ENST00000533039 MED1Q15648 1581 aaPredicted RBP13.2□□□□□ -0.3
SOX9-AS1-210ENST00000533039 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
SOX9-AS1-210ENST00000533039 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
SOX9-AS1-210ENST00000533039 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
SOX9-AS1-210ENST00000533039 TRPM2O94759 1503 aa13.18□□□□□ -0.3
SOX9-AS1-210ENST00000533039 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
SOX9-AS1-210ENST00000533039 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
SOX9-AS1-210ENST00000533039 MSH6P52701 1360 aa13.18□□□□□ -0.3
SOX9-AS1-210ENST00000533039 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
SOX9-AS1-210ENST00000533039 ZNF326Q5BKZ1 582 aaKnown RBP13.17□□□□□ -0.3
SOX9-AS1-210ENST00000533039 ILDR2Q71H61 639 aa13.17□□□□□ -0.3
SOX9-AS1-210ENST00000533039 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
SOX9-AS1-210ENST00000533039 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
SOX9-AS1-210ENST00000533039 FAM135BQ49AJ0 1406 aa13.15□□□□□ -0.3
SOX9-AS1-210ENST00000533039 ADAMTS13Q76LX8 1427 aa13.15□□□□□ -0.3
SOX9-AS1-210ENST00000533039 SETBP1Q9Y6X0 1596 aa13.14□□□□□ -0.31
SOX9-AS1-210ENST00000533039 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 SLC4A1APQ9BWU0 796 aaKnown RBP13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 NEXMIFQ5QGS0 1516 aa13.13□□□□□ -0.31
SOX9-AS1-210ENST00000533039 XRN1Q8IZH2 1706 aaKnown RBP13.11□□□□□ -0.31
SOX9-AS1-210ENST00000533039 SOCS7O14512 581 aa13.11□□□□□ -0.31
SOX9-AS1-210ENST00000533039 PPLO60437 1756 aa13.1□□□□□ -0.31
SOX9-AS1-210ENST00000533039 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
SOX9-AS1-210ENST00000533039 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
SOX9-AS1-210ENST00000533039 ATF3P18847 181 aa13.08□□□□□ -0.32
SOX9-AS1-210ENST00000533039 PTPRUQ92729 1446 aa13.07□□□□□ -0.32
SOX9-AS1-210ENST00000533039 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
SOX9-AS1-210ENST00000533039 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
SOX9-AS1-210ENST00000533039 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
SOX9-AS1-210ENST00000533039 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
SOX9-AS1-210ENST00000533039 SETD1AO15047 1707 aaKnown RBP13.06□□□□□ -0.32
SOX9-AS1-210ENST00000533039 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
SOX9-AS1-210ENST00000533039 METP08581 1390 aa13.05□□□□□ -0.32
SOX9-AS1-210ENST00000533039 NALCNQ8IZF0 1738 aa13.04□□□□□ -0.32
SOX9-AS1-210ENST00000533039 IFT172Q9UG01 1749 aa13.04□□□□□ -0.32
SOX9-AS1-210ENST00000533039 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
SOX9-AS1-210ENST00000533039 DCCP43146 1447 aa13.04□□□□□ -0.32
SOX9-AS1-210ENST00000533039 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
SOX9-AS1-210ENST00000533039 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
SOX9-AS1-210ENST00000533039 AHDC1Q5TGY3 1603 aaPredicted RBP13.02□□□□□ -0.33
SOX9-AS1-210ENST00000533039 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
SOX9-AS1-210ENST00000533039 SHPRHQ149N8 1683 aa13□□□□□ -0.33
SOX9-AS1-210ENST00000533039 JCADQ9P266 1359 aa13□□□□□ -0.33
SOX9-AS1-210ENST00000533039 ADGRL3Q9HAR2 1447 aa12.99□□□□□ -0.33
SOX9-AS1-210ENST00000533039 NHSL1Q5SYE7 1610 aa12.99□□□□□ -0.33
SOX9-AS1-210ENST00000533039 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
SOX9-AS1-210ENST00000533039 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
SOX9-AS1-210ENST00000533039 MST1RQ04912 1400 aa12.97□□□□□ -0.33
SOX9-AS1-210ENST00000533039 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
SOX9-AS1-210ENST00000533039 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
SOX9-AS1-210ENST00000533039 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
SOX9-AS1-210ENST00000533039 SPATA31E1Q6ZUB1 1445 aa12.96□□□□□ -0.34
SOX9-AS1-210ENST00000533039 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
SOX9-AS1-210ENST00000533039 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
SOX9-AS1-210ENST00000533039 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
SOX9-AS1-210ENST00000533039 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
SOX9-AS1-210ENST00000533039 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
SOX9-AS1-210ENST00000533039 LAMC1P11047 1609 aa12.94□□□□□ -0.34
SOX9-AS1-210ENST00000533039 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
SOX9-AS1-210ENST00000533039 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
SOX9-AS1-210ENST00000533039 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
SOX9-AS1-210ENST00000533039 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
SOX9-AS1-210ENST00000533039 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.34
SOX9-AS1-210ENST00000533039 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
SOX9-AS1-210ENST00000533039 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
SOX9-AS1-210ENST00000533039 LRP6O75581 1613 aa12.9□□□□□ -0.34
SOX9-AS1-210ENST00000533039 STK26Q9P289 416 aa12.89□□□□□ -0.35
SOX9-AS1-210ENST00000533039 MYOM2P54296 1465 aa12.89□□□□□ -0.35
SOX9-AS1-210ENST00000533039 TECPR2O15040 1411 aa12.88□□□□□ -0.35
SOX9-AS1-210ENST00000533039 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms