RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
TRAPPC4-211ENST00000533012 NUTM2DQ5VT03 806 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC4-211ENST00000533012 SLIT1O75093 1534 aa16.3■□□□□ 0.2
TRAPPC4-211ENST00000533012 ARHGAP23Q9P227 1491 aa16.3■□□□□ 0.2
TRAPPC4-211ENST00000533012 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC4-211ENST00000533012 BCANQ96GW7 911 aa16.3■□□□□ 0.2
TRAPPC4-211ENST00000533012 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
TRAPPC4-211ENST00000533012 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
TRAPPC4-211ENST00000533012 CLSPNQ9HAW4 1339 aa16.27■□□□□ 0.2
TRAPPC4-211ENST00000533012 ZFYVE9O95405 1425 aa16.27■□□□□ 0.19
TRAPPC4-211ENST00000533012 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
TRAPPC4-211ENST00000533012 KIF1BO60333 1816 aa16.26■□□□□ 0.19
TRAPPC4-211ENST00000533012 DCAF11Q8TEB1 546 aa16.25■□□□□ 0.19
TRAPPC4-211ENST00000533012 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-211ENST00000533012 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-211ENST00000533012 NEURL4Q96JN8 1562 aa16.24■□□□□ 0.19
TRAPPC4-211ENST00000533012 MED14O60244 1454 aa16.23■□□□□ 0.19
TRAPPC4-211ENST00000533012 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
TRAPPC4-211ENST00000533012 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
TRAPPC4-211ENST00000533012 SLC26A8Q96RN1 970 aa16.22■□□□□ 0.19
TRAPPC4-211ENST00000533012 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
TRAPPC4-211ENST00000533012 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
TRAPPC4-211ENST00000533012 ADGRF5Q8IZF2 1346 aa16.2■□□□□ 0.18
TRAPPC4-211ENST00000533012 MYO5BQ9ULV0 1848 aa16.2■□□□□ 0.18
TRAPPC4-211ENST00000533012 TBX22Q9Y458 520 aa16.2■□□□□ 0.18
TRAPPC4-211ENST00000533012 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
TRAPPC4-211ENST00000533012 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
TRAPPC4-211ENST00000533012 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
TRAPPC4-211ENST00000533012 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-211ENST00000533012 C14orf93Q9H972 538 aaKnown RBP16.14■□□□□ 0.17
TRAPPC4-211ENST00000533012 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
TRAPPC4-211ENST00000533012 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
TRAPPC4-211ENST00000533012 MYOM2P54296 1465 aa16.13■□□□□ 0.17
TRAPPC4-211ENST00000533012 KCNA6P17658 529 aa16.12■□□□□ 0.17
TRAPPC4-211ENST00000533012 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
TRAPPC4-211ENST00000533012 PPLO60437 1756 aa16.12■□□□□ 0.17
TRAPPC4-211ENST00000533012 ZNF335Q9H4Z2 1342 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-211ENST00000533012 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
TRAPPC4-211ENST00000533012 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
TRAPPC4-211ENST00000533012 PIK3R4Q99570 1358 aa16.1■□□□□ 0.17
TRAPPC4-211ENST00000533012 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
TRAPPC4-211ENST00000533012 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
TRAPPC4-211ENST00000533012 METP08581 1390 aa16.09■□□□□ 0.17
TRAPPC4-211ENST00000533012 TMEM132EQ6IEE7 984 aa16.08■□□□□ 0.16
TRAPPC4-211ENST00000533012 IFT172Q9UG01 1749 aa16.08■□□□□ 0.16
TRAPPC4-211ENST00000533012 DIP2AQ14689 1571 aa16.07■□□□□ 0.16
TRAPPC4-211ENST00000533012 ALKQ9UM73 1620 aa16.07■□□□□ 0.16
TRAPPC4-211ENST00000533012 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
TRAPPC4-211ENST00000533012 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
TRAPPC4-211ENST00000533012 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-211ENST00000533012 STK26Q9P289 416 aa16.05■□□□□ 0.16
TRAPPC4-211ENST00000533012 NRXN3Q9Y4C0 1643 aa16.05■□□□□ 0.16
TRAPPC4-211ENST00000533012 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
TRAPPC4-211ENST00000533012 PTPRUQ92729 1446 aa16.02■□□□□ 0.16
TRAPPC4-211ENST00000533012 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-211ENST00000533012 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
TRAPPC4-211ENST00000533012 ABCC11Q96J66 1382 aa16■□□□□ 0.15
TRAPPC4-211ENST00000533012 CPS1P31327 1500 aa16■□□□□ 0.15
TRAPPC4-211ENST00000533012 SIRT1Q96EB6 747 aa16■□□□□ 0.15
TRAPPC4-211ENST00000533012 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
TRAPPC4-211ENST00000533012 RBM33Q96EV2 1170 aaKnown RBP15.99■□□□□ 0.15
TRAPPC4-211ENST00000533012 TRAK1Q9UPV9 953 aa15.99■□□□□ 0.15
TRAPPC4-211ENST00000533012 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
TRAPPC4-211ENST00000533012 C14orf37Q86TY3 774 aa15.98■□□□□ 0.15
TRAPPC4-211ENST00000533012 ROCK2O75116 1388 aaKnown RBP15.98■□□□□ 0.15
TRAPPC4-211ENST00000533012 LAMC1P11047 1609 aa15.97■□□□□ 0.15
TRAPPC4-211ENST00000533012 TMEM94Q12767 1356 aa15.97■□□□□ 0.15
TRAPPC4-211ENST00000533012 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
TRAPPC4-211ENST00000533012 CHD2O14647 1828 aaKnown RBP15.96■□□□□ 0.15
TRAPPC4-211ENST00000533012 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
TRAPPC4-211ENST00000533012 CARD11Q9BXL7 1154 aa15.96■□□□□ 0.15
TRAPPC4-211ENST00000533012 POGKQ9P215 609 aa15.96■□□□□ 0.15
TRAPPC4-211ENST00000533012 ROBO2Q9HCK4 1378 aa15.96■□□□□ 0.15
TRAPPC4-211ENST00000533012 NWD1Q149M9 1564 aa15.96■□□□□ 0.14
TRAPPC4-211ENST00000533012 SETD1AO15047 1707 aaKnown RBP15.95■□□□□ 0.14
TRAPPC4-211ENST00000533012 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
TRAPPC4-211ENST00000533012 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
TRAPPC4-211ENST00000533012 PRAM1Q96QH2 718 aa15.94■□□□□ 0.14
TRAPPC4-211ENST00000533012 C19orf44Q9H6X5 657 aa15.94■□□□□ 0.14
TRAPPC4-211ENST00000533012 ADGRB1O14514 1584 aa15.94■□□□□ 0.14
TRAPPC4-211ENST00000533012 TECPR2O15040 1411 aa15.94■□□□□ 0.14
TRAPPC4-211ENST00000533012 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
TRAPPC4-211ENST00000533012 KIAA1210Q9ULL0 1709 aa15.93■□□□□ 0.14
TRAPPC4-211ENST00000533012 PTCH1Q13635 1447 aa15.93■□□□□ 0.14
TRAPPC4-211ENST00000533012 STRCP1A6NGW2 1772 aa15.92■□□□□ 0.14
TRAPPC4-211ENST00000533012 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
TRAPPC4-211ENST00000533012 GPRASP1Q5JY77 1395 aa15.91■□□□□ 0.14
TRAPPC4-211ENST00000533012 SAFB2Q14151 953 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRAPPC4-211ENST00000533012 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
TRAPPC4-211ENST00000533012 RALGAPBQ86X10 1494 aa15.91■□□□□ 0.14
TRAPPC4-211ENST00000533012 MSH6P52701 1360 aa15.9■□□□□ 0.14
TRAPPC4-211ENST00000533012 ATF3P18847 181 aa15.9■□□□□ 0.14
TRAPPC4-211ENST00000533012 TRPM1Q7Z4N2 1603 aa15.9■□□□□ 0.14
TRAPPC4-211ENST00000533012 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
TRAPPC4-211ENST00000533012 TOM1O60784 492 aa15.89■□□□□ 0.13
TRAPPC4-211ENST00000533012 IQSEC2Q5JU85 1478 aa15.89■□□□□ 0.13
TRAPPC4-211ENST00000533012 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
TRAPPC4-211ENST00000533012 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC4-211ENST00000533012 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
TRAPPC4-211ENST00000533012 UBAP1LF5GYI3 381 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms