RNA–Protein interactions for RNA: ENST00000532942.5

RCN1-210, Transcript of reticulocalbin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RCN1, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-210ENST00000532942 ZFYVE9O95405 1425 aa23.11■■□□□ 1.29
RCN1-210ENST00000532942 FAM135BQ49AJ0 1406 aa23.1■■□□□ 1.29
RCN1-210ENST00000532942 RIMS2Q9UQ26 1411 aa23.1■■□□□ 1.29
RCN1-210ENST00000532942 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
RCN1-210ENST00000532942 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
RCN1-210ENST00000532942 CHGAP10645 457 aaKnown RBP23.09■■□□□ 1.29
RCN1-210ENST00000532942 ITGAEP38570 1179 aa23.09■■□□□ 1.29
RCN1-210ENST00000532942 HDGFP51858 240 aaKnown RBP23.09■■□□□ 1.29
RCN1-210ENST00000532942 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
RCN1-210ENST00000532942 UNC13BO14795 1591 aa23.09■■□□□ 1.29
RCN1-210ENST00000532942 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
RCN1-210ENST00000532942 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
RCN1-210ENST00000532942 NUP155O75694 1391 aa23.04■■□□□ 1.28
RCN1-210ENST00000532942 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
RCN1-210ENST00000532942 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
RCN1-210ENST00000532942 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
RCN1-210ENST00000532942 GCC2Q8IWJ2 1684 aa23.03■■□□□ 1.28
RCN1-210ENST00000532942 TBX22Q9Y458 520 aa23.03■■□□□ 1.28
RCN1-210ENST00000532942 E9PCH4 1651 aa23.01■■□□□ 1.27
RCN1-210ENST00000532942 MSH6P52701 1360 aa23.01■■□□□ 1.27
RCN1-210ENST00000532942 MYO5BQ9ULV0 1848 aa23■■□□□ 1.27
RCN1-210ENST00000532942 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
RCN1-210ENST00000532942 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
RCN1-210ENST00000532942 SLAIN2Q9P270 581 aa22.98■■□□□ 1.27
RCN1-210ENST00000532942 ADAMTS13Q76LX8 1427 aa22.97■■□□□ 1.27
RCN1-210ENST00000532942 ROBO1Q9Y6N7 1651 aa22.95■■□□□ 1.26
RCN1-210ENST00000532942 CHD2O14647 1828 aaKnown RBP22.94■■□□□ 1.26
RCN1-210ENST00000532942 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
RCN1-210ENST00000532942 C14orf37Q86TY3 774 aa22.91■■□□□ 1.26
RCN1-210ENST00000532942 PIK3R4Q99570 1358 aa22.9■■□□□ 1.26
RCN1-210ENST00000532942 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
RCN1-210ENST00000532942 C19orf44Q9H6X5 657 aa22.87■■□□□ 1.25
RCN1-210ENST00000532942 DIP2AQ14689 1571 aa22.87■■□□□ 1.25
RCN1-210ENST00000532942 PTPRUQ92729 1446 aa22.86■■□□□ 1.25
RCN1-210ENST00000532942 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
RCN1-210ENST00000532942 POTEAQ6S8J7 498 aa22.85■■□□□ 1.25
RCN1-210ENST00000532942 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
RCN1-210ENST00000532942 ATF3P18847 181 aa22.84■■□□□ 1.25
RCN1-210ENST00000532942 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
RCN1-210ENST00000532942 TRPM2O94759 1503 aa22.83■■□□□ 1.25
RCN1-210ENST00000532942 JCADQ9P266 1359 aa22.83■■□□□ 1.25
RCN1-210ENST00000532942 PHLPP1O60346 1717 aa22.8■■□□□ 1.24
RCN1-210ENST00000532942 NAIPQ13075 1403 aa22.8■■□□□ 1.24
RCN1-210ENST00000532942 METP08581 1390 aa22.78■■□□□ 1.24
RCN1-210ENST00000532942 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
RCN1-210ENST00000532942 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.77■■□□□ 1.24
RCN1-210ENST00000532942 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.24
RCN1-210ENST00000532942 NRXN3Q9Y4C0 1643 aa22.76■■□□□ 1.23
RCN1-210ENST00000532942 COL16A1Q07092 1604 aaPredicted RBP22.75■■□□□ 1.23
RCN1-210ENST00000532942 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
RCN1-210ENST00000532942 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
RCN1-210ENST00000532942 CLTCL1P53675 1640 aa22.74■■□□□ 1.23
RCN1-210ENST00000532942 SPATA31A6Q5VVP1 1343 aa22.72■■□□□ 1.23
RCN1-210ENST00000532942 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
RCN1-210ENST00000532942 DCCP43146 1447 aa22.71■■□□□ 1.23
RCN1-210ENST00000532942 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
RCN1-210ENST00000532942 AHDC1Q5TGY3 1603 aaPredicted RBP22.71■■□□□ 1.23
RCN1-210ENST00000532942 LRP6O75581 1613 aa22.69■■□□□ 1.22
RCN1-210ENST00000532942 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
RCN1-210ENST00000532942 MST1RQ04912 1400 aa22.67■■□□□ 1.22
RCN1-210ENST00000532942 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
RCN1-210ENST00000532942 SLC4A1APQ9BWU0 796 aaKnown RBP22.67■■□□□ 1.22
RCN1-210ENST00000532942 VGFO15240 615 aaPredicted RBP22.66■■□□□ 1.22
RCN1-210ENST00000532942 ADGRL3Q9HAR2 1447 aa22.64■■□□□ 1.21
RCN1-210ENST00000532942 ASXL1Q8IXJ9 1541 aa22.63■■□□□ 1.21
RCN1-210ENST00000532942 NUTM2BA6NNL0 878 aaPredicted RBP22.62■■□□□ 1.21
RCN1-210ENST00000532942 NUTM2EB1AL46 878 aaPredicted RBP22.62■■□□□ 1.21
RCN1-210ENST00000532942 NUTM2AQ8IVF1 878 aaPredicted RBP22.62■■□□□ 1.21
RCN1-210ENST00000532942 RPGRIP1LQ68CZ1 1315 aa22.61■■□□□ 1.21
RCN1-210ENST00000532942 ZNF772Q68DY9 489 aaPredicted RBP22.61■■□□□ 1.21
RCN1-210ENST00000532942 DDX17Q92841 729 aaKnown RBP22.61■■□□□ 1.21
RCN1-210ENST00000532942 SETD5Q9C0A6 1442 aa22.6■■□□□ 1.21
RCN1-210ENST00000532942 KIF1BO60333 1816 aa22.6■■□□□ 1.21
RCN1-210ENST00000532942 FOXD1Q16676 465 aa22.6■■□□□ 1.21
RCN1-210ENST00000532942 SHPRHQ149N8 1683 aa22.6■■□□□ 1.21
RCN1-210ENST00000532942 LRRC59Q96AG4 307 aaKnown RBP22.58■■□□□ 1.21
RCN1-210ENST00000532942 ROBO2Q9HCK4 1378 aa22.58■■□□□ 1.21
RCN1-210ENST00000532942 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
RCN1-210ENST00000532942 C1orf167Q5SNV9 1468 aa22.55■■□□□ 1.2
RCN1-210ENST00000532942 NALCNQ8IZF0 1738 aa22.54■■□□□ 1.2
RCN1-210ENST00000532942 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
RCN1-210ENST00000532942 ORAI2Q96SN7 254 aa22.52■■□□□ 1.2
RCN1-210ENST00000532942 PNPLA6Q8IY17 1366 aa22.51■■□□□ 1.19
RCN1-210ENST00000532942 SETD1AO15047 1707 aaKnown RBP22.51■■□□□ 1.19
RCN1-210ENST00000532942 PRAG1Q86YV5 1406 aa22.51■■□□□ 1.19
RCN1-210ENST00000532942 AFF2P51816 1311 aa22.51■■□□□ 1.19
RCN1-210ENST00000532942 ADGRF5Q8IZF2 1346 aa22.51■■□□□ 1.19
RCN1-210ENST00000532942 RXRBP28702 533 aa22.5■■□□□ 1.19
RCN1-210ENST00000532942 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
RCN1-210ENST00000532942 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
RCN1-210ENST00000532942 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
RCN1-210ENST00000532942 C8orf37Q96NL8 207 aa22.47■■□□□ 1.19
RCN1-210ENST00000532942 PPLO60437 1756 aa22.47■■□□□ 1.19
RCN1-210ENST00000532942 SOS2Q07890 1332 aaPredicted RBP22.46■■□□□ 1.19
RCN1-210ENST00000532942 SPATA31E1Q6ZUB1 1445 aa22.45■■□□□ 1.18
RCN1-210ENST00000532942 UPF1Q92900 1129 aaKnown RBP eCLIP22.44■■□□□ 1.18
RCN1-210ENST00000532942 STK26Q9P289 416 aa22.44■■□□□ 1.18
RCN1-210ENST00000532942 ADAMTS2O95450 1211 aa22.43■■□□□ 1.18
RCN1-210ENST00000532942 ANKRD30BQ9BXX2 1392 aa22.42■■□□□ 1.18
RCN1-210ENST00000532942 QTRT2Q9H974 415 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms