RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 JCADQ9P266 1359 aa22.61■■□□□ 1.21
CDC27-209ENST00000532893 NKTRP30414 1462 aaKnown RBP22.6■■□□□ 1.21
CDC27-209ENST00000532893 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
CDC27-209ENST00000532893 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
CDC27-209ENST00000532893 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
CDC27-209ENST00000532893 NWD1Q149M9 1564 aa22.56■■□□□ 1.2
CDC27-209ENST00000532893 HDGFP51858 240 aaKnown RBP22.56■■□□□ 1.2
CDC27-209ENST00000532893 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
CDC27-209ENST00000532893 PLEKHG1Q9ULL1 1385 aa22.54■■□□□ 1.2
CDC27-209ENST00000532893 C14orf37Q86TY3 774 aa22.54■■□□□ 1.2
CDC27-209ENST00000532893 TBX22Q9Y458 520 aa22.53■■□□□ 1.2
CDC27-209ENST00000532893 RIMS2Q9UQ26 1411 aa22.53■■□□□ 1.2
CDC27-209ENST00000532893 ZFYVE9O95405 1425 aa22.52■■□□□ 1.2
CDC27-209ENST00000532893 MEX3CQ5U5Q3 659 aaKnown RBP22.52■■□□□ 1.2
CDC27-209ENST00000532893 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
CDC27-209ENST00000532893 SETD1AO15047 1707 aaKnown RBP22.51■■□□□ 1.19
CDC27-209ENST00000532893 NUTM2DQ5VT03 806 aaPredicted RBP22.5■■□□□ 1.19
CDC27-209ENST00000532893 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
CDC27-209ENST00000532893 SPATA31A6Q5VVP1 1343 aa22.49■■□□□ 1.19
CDC27-209ENST00000532893 FAM50AQ14320 339 aaKnown RBP22.48■■□□□ 1.19
CDC27-209ENST00000532893 ZNF772Q68DY9 489 aaPredicted RBP22.48■■□□□ 1.19
CDC27-209ENST00000532893 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDC27-209ENST00000532893 UPF1Q92900 1129 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDC27-209ENST00000532893 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
CDC27-209ENST00000532893 ATF3P18847 181 aa22.47■■□□□ 1.19
CDC27-209ENST00000532893 CADPS2Q86UW7 1296 aa22.47■■□□□ 1.19
CDC27-209ENST00000532893 C19orf44Q9H6X5 657 aa22.47■■□□□ 1.19
CDC27-209ENST00000532893 NCOA3Q9Y6Q9 1424 aa22.47■■□□□ 1.19
CDC27-209ENST00000532893 RPRD2Q5VT52 1461 aaKnown RBP22.47■■□□□ 1.19
CDC27-209ENST00000532893 ANKRD50Q9ULJ7 1429 aa22.46■■□□□ 1.19
CDC27-209ENST00000532893 LRP6O75581 1613 aa22.46■■□□□ 1.19
CDC27-209ENST00000532893 COL16A1Q07092 1604 aaPredicted RBP22.46■■□□□ 1.19
CDC27-209ENST00000532893 ADGRL2O95490 1459 aa22.44■■□□□ 1.18
CDC27-209ENST00000532893 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
CDC27-209ENST00000532893 NUTM2BA6NNL0 878 aaPredicted RBP22.41■■□□□ 1.18
CDC27-209ENST00000532893 NUTM2EB1AL46 878 aaPredicted RBP22.41■■□□□ 1.18
CDC27-209ENST00000532893 RXRBP28702 533 aa22.41■■□□□ 1.18
CDC27-209ENST00000532893 NUTM2AQ8IVF1 878 aaPredicted RBP22.41■■□□□ 1.18
CDC27-209ENST00000532893 TMEM131LA2VDJ0 1609 aa22.41■■□□□ 1.18
CDC27-209ENST00000532893 ADAMTS13Q76LX8 1427 aa22.4■■□□□ 1.18
CDC27-209ENST00000532893 AMOTL2Q9Y2J4 779 aa22.4■■□□□ 1.18
CDC27-209ENST00000532893 BRINP3Q76B58 766 aa22.39■■□□□ 1.17
CDC27-209ENST00000532893 GCC2Q8IWJ2 1684 aa22.39■■□□□ 1.17
CDC27-209ENST00000532893 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
CDC27-209ENST00000532893 PIK3R4Q99570 1358 aa22.37■■□□□ 1.17
CDC27-209ENST00000532893 AHDC1Q5TGY3 1603 aaPredicted RBP22.35■■□□□ 1.17
CDC27-209ENST00000532893 PTPRUQ92729 1446 aa22.33■■□□□ 1.17
CDC27-209ENST00000532893 AFF2P51816 1311 aa22.32■■□□□ 1.16
CDC27-209ENST00000532893 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
CDC27-209ENST00000532893 DIP2AQ14689 1571 aa22.3■■□□□ 1.16
CDC27-209ENST00000532893 TRPM2O94759 1503 aa22.27■■□□□ 1.16
CDC27-209ENST00000532893 LRRC59Q96AG4 307 aaKnown RBP22.27■■□□□ 1.16
CDC27-209ENST00000532893 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
CDC27-209ENST00000532893 QTRT2Q9H974 415 aaKnown RBP22.26■■□□□ 1.15
CDC27-209ENST00000532893 E9PCH4 1651 aa22.26■■□□□ 1.15
CDC27-209ENST00000532893 NUP155O75694 1391 aa22.25■■□□□ 1.15
CDC27-209ENST00000532893 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
CDC27-209ENST00000532893 C8orf37Q96NL8 207 aa22.25■■□□□ 1.15
CDC27-209ENST00000532893 CDK12Q9NYV4 1490 aaPredicted RBP22.25■■□□□ 1.15
CDC27-209ENST00000532893 UNC13BO14795 1591 aa22.25■■□□□ 1.15
CDC27-209ENST00000532893 DCCP43146 1447 aa22.24■■□□□ 1.15
CDC27-209ENST00000532893 ASXL1Q8IXJ9 1541 aa22.23■■□□□ 1.15
CDC27-209ENST00000532893 MST1RQ04912 1400 aa22.23■■□□□ 1.15
CDC27-209ENST00000532893 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
CDC27-209ENST00000532893 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
CDC27-209ENST00000532893 METP08581 1390 aa22.21■■□□□ 1.15
CDC27-209ENST00000532893 ROCK1Q13464 1354 aa22.2■■□□□ 1.14
CDC27-209ENST00000532893 ITGAEP38570 1179 aa22.18■■□□□ 1.14
CDC27-209ENST00000532893 SRCAPQ6ZRS2 3230 aa22.18■■□□□ 1.14
CDC27-209ENST00000532893 IQGAP3Q86VI3 1631 aa22.17■■□□□ 1.14
CDC27-209ENST00000532893 PNPLA6Q8IY17 1366 aa22.17■■□□□ 1.14
CDC27-209ENST00000532893 ADAMTS2O95450 1211 aa22.17■■□□□ 1.14
CDC27-209ENST00000532893 NGLY1Q96IV0 654 aa22.17■■□□□ 1.14
CDC27-209ENST00000532893 RGS12O14924 1447 aa22.16■■□□□ 1.14
CDC27-209ENST00000532893 XRN1Q8IZH2 1706 aaKnown RBP22.14■■□□□ 1.14
CDC27-209ENST00000532893 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
CDC27-209ENST00000532893 SETBP1Q9Y6X0 1596 aa22.13■■□□□ 1.13
CDC27-209ENST00000532893 ADGRL3Q9HAR2 1447 aa22.13■■□□□ 1.13
CDC27-209ENST00000532893 NHSL1Q5SYE7 1610 aa22.13■■□□□ 1.13
CDC27-209ENST00000532893 ORAI2Q96SN7 254 aa22.09■■□□□ 1.13
CDC27-209ENST00000532893 C1orf167Q5SNV9 1468 aa22.09■■□□□ 1.13
CDC27-209ENST00000532893 USP21Q9UK80 565 aa22.08■■□□□ 1.13
CDC27-209ENST00000532893 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
CDC27-209ENST00000532893 TRPC5Q9UL62 973 aaPredicted RBP22.05■■□□□ 1.12
CDC27-209ENST00000532893 ATAD2Q6PL18 1390 aa22.04■■□□□ 1.12
CDC27-209ENST00000532893 FNBP4Q8N3X1 1017 aaPredicted RBP22.02■■□□□ 1.12
CDC27-209ENST00000532893 SPHKAPQ2M3C7 1700 aa22.02■■□□□ 1.12
CDC27-209ENST00000532893 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
CDC27-209ENST00000532893 ROBO2Q9HCK4 1378 aa22.01■■□□□ 1.11
CDC27-209ENST00000532893 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
CDC27-209ENST00000532893 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
CDC27-209ENST00000532893 VGFO15240 615 aaPredicted RBP22■■□□□ 1.11
CDC27-209ENST00000532893 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
CDC27-209ENST00000532893 ADRA2BP18089 450 aa21.97■■□□□ 1.11
CDC27-209ENST00000532893 PTCH1Q13635 1447 aa21.97■■□□□ 1.11
CDC27-209ENST00000532893 CLTCL1P53675 1640 aa21.96■■□□□ 1.11
CDC27-209ENST00000532893 ESCO1Q5FWF5 840 aa21.95■■□□□ 1.1
CDC27-209ENST00000532893 ATRNO75882 1429 aa21.95■■□□□ 1.1
CDC27-209ENST00000532893 LAMC1P11047 1609 aa21.94■■□□□ 1.1
CDC27-209ENST00000532893 XPCQ01831 940 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms