RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
COL16A1-217ENST00000532877 IDI1Q13907 227 aa20.74■□□□□ 0.91
COL16A1-217ENST00000532877 SPATA31E1Q6ZUB1 1445 aa20.74■□□□□ 0.91
COL16A1-217ENST00000532877 TMEM131LA2VDJ0 1609 aa20.73■□□□□ 0.91
COL16A1-217ENST00000532877 MYO5BQ9ULV0 1848 aa20.72■□□□□ 0.91
COL16A1-217ENST00000532877 KDM5AP29375 1690 aaKnown RBP20.71■□□□□ 0.91
COL16A1-217ENST00000532877 TONSLQ96HA7 1378 aa20.71■□□□□ 0.91
COL16A1-217ENST00000532877 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
COL16A1-217ENST00000532877 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
COL16A1-217ENST00000532877 MED14O60244 1454 aa20.68■□□□□ 0.9
COL16A1-217ENST00000532877 TOM1O60784 492 aa20.67■□□□□ 0.9
COL16A1-217ENST00000532877 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
COL16A1-217ENST00000532877 IFT172Q9UG01 1749 aa20.65■□□□□ 0.9
COL16A1-217ENST00000532877 TIMELESSQ9UNS1 1208 aa20.65■□□□□ 0.9
COL16A1-217ENST00000532877 PIP4K2BP78356 416 aa20.64■□□□□ 0.89
COL16A1-217ENST00000532877 RGL3Q3MIN7 710 aa20.64■□□□□ 0.89
COL16A1-217ENST00000532877 L3MBTL2Q969R5 705 aa20.64■□□□□ 0.89
COL16A1-217ENST00000532877 STAG3Q9UJ98 1225 aa20.63■□□□□ 0.89
COL16A1-217ENST00000532877 PPLO60437 1756 aa20.63■□□□□ 0.89
COL16A1-217ENST00000532877 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
COL16A1-217ENST00000532877 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-217ENST00000532877 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
COL16A1-217ENST00000532877 IQGAP1P46940 1657 aa20.6■□□□□ 0.89
COL16A1-217ENST00000532877 MYOM2P54296 1465 aa20.58■□□□□ 0.89
COL16A1-217ENST00000532877 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
COL16A1-217ENST00000532877 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
COL16A1-217ENST00000532877 ZFYVE9O95405 1425 aa20.57■□□□□ 0.88
COL16A1-217ENST00000532877 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
COL16A1-217ENST00000532877 SLIT1O75093 1534 aa20.57■□□□□ 0.88
COL16A1-217ENST00000532877 LRRC7Q96NW7 1537 aa20.57■□□□□ 0.88
COL16A1-217ENST00000532877 NPHP4O75161 1426 aaPredicted RBP20.56■□□□□ 0.88
COL16A1-217ENST00000532877 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
COL16A1-217ENST00000532877 TMEM2Q9UHN6 1383 aa20.56■□□□□ 0.88
COL16A1-217ENST00000532877 ARHGAP23Q9P227 1491 aa20.56■□□□□ 0.88
COL16A1-217ENST00000532877 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
COL16A1-217ENST00000532877 ANKLE2Q86XL3 938 aa20.54■□□□□ 0.88
COL16A1-217ENST00000532877 RGS17Q9UGC6 210 aaPredicted RBP20.54■□□□□ 0.88
COL16A1-217ENST00000532877 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
COL16A1-217ENST00000532877 THEMISQ8N1K5 641 aaPredicted RBP20.53■□□□□ 0.88
COL16A1-217ENST00000532877 NRXN1Q9ULB1 1477 aa20.53■□□□□ 0.88
COL16A1-217ENST00000532877 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
COL16A1-217ENST00000532877 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
COL16A1-217ENST00000532877 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
COL16A1-217ENST00000532877 ADGRF5Q8IZF2 1346 aa20.5■□□□□ 0.87
COL16A1-217ENST00000532877 NUTM2DQ5VT03 806 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-217ENST00000532877 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-217ENST00000532877 PIK3C2GO75747 1445 aa20.48■□□□□ 0.87
COL16A1-217ENST00000532877 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
COL16A1-217ENST00000532877 VGFO15240 615 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-217ENST00000532877 NBPF8Q3BBV2 869 aa20.47■□□□□ 0.87
COL16A1-217ENST00000532877 SCAF11Q99590 1463 aaKnown RBP20.47■□□□□ 0.87
COL16A1-217ENST00000532877 TRPM1Q7Z4N2 1603 aa20.46■□□□□ 0.87
COL16A1-217ENST00000532877 LTKP29376 864 aa20.45■□□□□ 0.86
COL16A1-217ENST00000532877 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.86
COL16A1-217ENST00000532877 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
COL16A1-217ENST00000532877 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
COL16A1-217ENST00000532877 RALGAPBQ86X10 1494 aa20.44■□□□□ 0.86
COL16A1-217ENST00000532877 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
COL16A1-217ENST00000532877 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
COL16A1-217ENST00000532877 LAMC1P11047 1609 aa20.43■□□□□ 0.86
COL16A1-217ENST00000532877 TXNDC2Q86VQ3 553 aa20.43■□□□□ 0.86
COL16A1-217ENST00000532877 PLEKHG1Q9ULL1 1385 aa20.43■□□□□ 0.86
COL16A1-217ENST00000532877 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
COL16A1-217ENST00000532877 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
COL16A1-217ENST00000532877 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
COL16A1-217ENST00000532877 ROCK2O75116 1388 aaKnown RBP20.36■□□□□ 0.85
COL16A1-217ENST00000532877 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
COL16A1-217ENST00000532877 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
COL16A1-217ENST00000532877 DIP2AQ14689 1571 aa20.36■□□□□ 0.85
COL16A1-217ENST00000532877 ASXL1Q8IXJ9 1541 aa20.36■□□□□ 0.85
COL16A1-217ENST00000532877 GPRASP1Q5JY77 1395 aa20.35■□□□□ 0.85
COL16A1-217ENST00000532877 ADGRB1O14514 1584 aa20.35■□□□□ 0.85
COL16A1-217ENST00000532877 FAM135BQ49AJ0 1406 aa20.35■□□□□ 0.85
COL16A1-217ENST00000532877 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
COL16A1-217ENST00000532877 POTEAQ6S8J7 498 aa20.32■□□□□ 0.84
COL16A1-217ENST00000532877 BCANQ96GW7 911 aa20.32■□□□□ 0.84
COL16A1-217ENST00000532877 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
COL16A1-217ENST00000532877 CARD11Q9BXL7 1154 aa20.28■□□□□ 0.84
COL16A1-217ENST00000532877 METP08581 1390 aa20.28■□□□□ 0.84
COL16A1-217ENST00000532877 ROBO1Q9Y6N7 1651 aa20.28■□□□□ 0.84
COL16A1-217ENST00000532877 TMEM132EQ6IEE7 984 aa20.27■□□□□ 0.84
COL16A1-217ENST00000532877 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
COL16A1-217ENST00000532877 YTHDC2Q9H6S0 1430 aaKnown RBP20.25■□□□□ 0.83
COL16A1-217ENST00000532877 USP47Q96K76 1375 aa20.24■□□□□ 0.83
COL16A1-217ENST00000532877 KNDC1Q76NI1 1749 aa20.24■□□□□ 0.83
COL16A1-217ENST00000532877 ARHGEF28Q8N1W1 1705 aaKnown RBP20.23■□□□□ 0.83
COL16A1-217ENST00000532877 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
COL16A1-217ENST00000532877 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
COL16A1-217ENST00000532877 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
COL16A1-217ENST00000532877 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
COL16A1-217ENST00000532877 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
COL16A1-217ENST00000532877 TECPR2O15040 1411 aa20.2■□□□□ 0.82
COL16A1-217ENST00000532877 DLC1Q96QB1 1528 aa20.2■□□□□ 0.82
COL16A1-217ENST00000532877 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
COL16A1-217ENST00000532877 TMEM94Q12767 1356 aa20.2■□□□□ 0.82
COL16A1-217ENST00000532877 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL16A1-217ENST00000532877 EIF3AQ14152 1382 aaKnown RBP20.19■□□□□ 0.82
COL16A1-217ENST00000532877 STK26Q9P289 416 aa20.18■□□□□ 0.82
COL16A1-217ENST00000532877 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
COL16A1-217ENST00000532877 ABCC11Q96J66 1382 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms