RNA–Protein interactions for RNA: ENST00000532674.2

RPUSD4-206, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-206ENST00000532674 NKTRP30414 1462 aaKnown RBP29.06■■■□□ 2.24
RPUSD4-206ENST00000532674 RPRD2Q5VT52 1461 aaKnown RBP29.06■■■□□ 2.24
RPUSD4-206ENST00000532674 HDGFP51858 240 aaKnown RBP29.05■■■□□ 2.24
RPUSD4-206ENST00000532674 ROBO1Q9Y6N7 1651 aa29.05■■■□□ 2.24
RPUSD4-206ENST00000532674 MSH6P52701 1360 aa29.04■■■□□ 2.24
RPUSD4-206ENST00000532674 SLAIN2Q9P270 581 aa29.04■■■□□ 2.24
RPUSD4-206ENST00000532674 PPP1R15AO75807 674 aaPredicted RBP29.03■■■□□ 2.24
RPUSD4-206ENST00000532674 NWD1Q149M9 1564 aa29.02■■■□□ 2.24
RPUSD4-206ENST00000532674 PLEKHG1Q9ULL1 1385 aa29.01■■■□□ 2.24
RPUSD4-206ENST00000532674 POTEAQ6S8J7 498 aa29.01■■■□□ 2.23
RPUSD4-206ENST00000532674 ZFYVE9O95405 1425 aa29.01■■■□□ 2.23
RPUSD4-206ENST00000532674 RIMS2Q9UQ26 1411 aa28.99■■■□□ 2.23
RPUSD4-206ENST00000532674 TBX22Q9Y458 520 aa28.97■■■□□ 2.23
RPUSD4-206ENST00000532674 CHGAP10645 457 aaKnown RBP28.95■■■□□ 2.22
RPUSD4-206ENST00000532674 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.95■■■□□ 2.22
RPUSD4-206ENST00000532674 TMEM131LA2VDJ0 1609 aa28.92■■■□□ 2.22
RPUSD4-206ENST00000532674 CHD2O14647 1828 aaKnown RBP28.92■■■□□ 2.22
RPUSD4-206ENST00000532674 MYO5BQ9ULV0 1848 aa28.91■■■□□ 2.22
RPUSD4-206ENST00000532674 JCADQ9P266 1359 aa28.9■■■□□ 2.22
RPUSD4-206ENST00000532674 GCC2Q8IWJ2 1684 aa28.9■■■□□ 2.22
RPUSD4-206ENST00000532674 NUTM2DQ5VT03 806 aaPredicted RBP28.89■■■□□ 2.22
RPUSD4-206ENST00000532674 C14orf37Q86TY3 774 aa28.89■■■□□ 2.22
RPUSD4-206ENST00000532674 NCOA3Q9Y6Q9 1424 aa28.88■■■□□ 2.21
RPUSD4-206ENST00000532674 PHLPP1O60346 1717 aa28.88■■■□□ 2.21
RPUSD4-206ENST00000532674 UNC13BO14795 1591 aa28.85■■■□□ 2.21
RPUSD4-206ENST00000532674 ADAMTS13Q76LX8 1427 aa28.84■■■□□ 2.21
RPUSD4-206ENST00000532674 C19orf44Q9H6X5 657 aa28.83■■■□□ 2.21
RPUSD4-206ENST00000532674 CADPS2Q86UW7 1296 aa28.82■■■□□ 2.2
RPUSD4-206ENST00000532674 ROCK1Q13464 1354 aa28.82■■■□□ 2.2
RPUSD4-206ENST00000532674 PIK3R4Q99570 1358 aa28.81■■■□□ 2.2
RPUSD4-206ENST00000532674 ATF3P18847 181 aa28.81■■■□□ 2.2
RPUSD4-206ENST00000532674 E9PCH4 1651 aa28.8■■■□□ 2.2
RPUSD4-206ENST00000532674 NUP155O75694 1391 aa28.78■■■□□ 2.2
RPUSD4-206ENST00000532674 COL16A1Q07092 1604 aaPredicted RBP28.77■■■□□ 2.2
RPUSD4-206ENST00000532674 SPATA31A6Q5VVP1 1343 aa28.77■■■□□ 2.2
RPUSD4-206ENST00000532674 DIP2AQ14689 1571 aa28.77■■■□□ 2.2
RPUSD4-206ENST00000532674 AMOTL2Q9Y2J4 779 aa28.77■■■□□ 2.2
RPUSD4-206ENST00000532674 IQGAP3Q86VI3 1631 aa28.75■■■□□ 2.19
RPUSD4-206ENST00000532674 ITGAEP38570 1179 aa28.73■■■□□ 2.19
RPUSD4-206ENST00000532674 MEX3CQ5U5Q3 659 aaKnown RBP28.73■■■□□ 2.19
RPUSD4-206ENST00000532674 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.73■■■□□ 2.19
RPUSD4-206ENST00000532674 TRPM2O94759 1503 aa28.7■■■□□ 2.19
RPUSD4-206ENST00000532674 PTPRUQ92729 1446 aa28.69■■■□□ 2.18
RPUSD4-206ENST00000532674 LRP6O75581 1613 aa28.69■■■□□ 2.18
RPUSD4-206ENST00000532674 ZNF772Q68DY9 489 aaPredicted RBP28.69■■■□□ 2.18
RPUSD4-206ENST00000532674 AHDC1Q5TGY3 1603 aaPredicted RBP28.69■■■□□ 2.18
RPUSD4-206ENST00000532674 BRINP3Q76B58 766 aa28.68■■■□□ 2.18
RPUSD4-206ENST00000532674 SETD1AO15047 1707 aaKnown RBP28.64■■■□□ 2.18
RPUSD4-206ENST00000532674 ZNF326Q5BKZ1 582 aaKnown RBP28.63■■■□□ 2.17
RPUSD4-206ENST00000532674 DCCP43146 1447 aa28.61■■■□□ 2.17
RPUSD4-206ENST00000532674 SHPRHQ149N8 1683 aa28.61■■■□□ 2.17
RPUSD4-206ENST00000532674 NUTM2BA6NNL0 878 aaPredicted RBP28.6■■■□□ 2.17
RPUSD4-206ENST00000532674 NUTM2EB1AL46 878 aaPredicted RBP28.6■■■□□ 2.17
RPUSD4-206ENST00000532674 NUTM2AQ8IVF1 878 aaPredicted RBP28.6■■■□□ 2.17
RPUSD4-206ENST00000532674 TRIM52Q96A61 297 aa28.6■■■□□ 2.17
RPUSD4-206ENST00000532674 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
RPUSD4-206ENST00000532674 PPARGC1BQ86YN6 1023 aaKnown RBP28.57■■■□□ 2.16
RPUSD4-206ENST00000532674 METP08581 1390 aa28.57■■■□□ 2.16
RPUSD4-206ENST00000532674 RXRBP28702 533 aa28.56■■■□□ 2.16
RPUSD4-206ENST00000532674 NRXN3Q9Y4C0 1643 aa28.56■■■□□ 2.16
RPUSD4-206ENST00000532674 UPF1Q92900 1129 aaKnown RBP eCLIP28.55■■■□□ 2.16
RPUSD4-206ENST00000532674 XRN1Q8IZH2 1706 aaKnown RBP28.55■■■□□ 2.16
RPUSD4-206ENST00000532674 MST1RQ04912 1400 aa28.54■■■□□ 2.16
RPUSD4-206ENST00000532674 ASXL1Q8IXJ9 1541 aa28.53■■■□□ 2.16
RPUSD4-206ENST00000532674 LRRC59Q96AG4 307 aaKnown RBP28.53■■■□□ 2.16
RPUSD4-206ENST00000532674 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
RPUSD4-206ENST00000532674 SPHKAPQ2M3C7 1700 aa28.52■■■□□ 2.16
RPUSD4-206ENST00000532674 AFF2P51816 1311 aa28.49■■■□□ 2.15
RPUSD4-206ENST00000532674 ADGRL3Q9HAR2 1447 aa28.47■■■□□ 2.15
RPUSD4-206ENST00000532674 DDX17Q92841 729 aaKnown RBP28.47■■■□□ 2.15
RPUSD4-206ENST00000532674 NEXMIFQ5QGS0 1516 aa28.43■■■□□ 2.14
RPUSD4-206ENST00000532674 NHSL1Q5SYE7 1610 aa28.43■■■□□ 2.14
RPUSD4-206ENST00000532674 CDK12Q9NYV4 1490 aaPredicted RBP28.43■■■□□ 2.14
RPUSD4-206ENST00000532674 CLTCL1P53675 1640 aa28.43■■■□□ 2.14
RPUSD4-206ENST00000532674 C8orf37Q96NL8 207 aa28.42■■■□□ 2.14
RPUSD4-206ENST00000532674 PNPLA6Q8IY17 1366 aa28.4■■■□□ 2.14
RPUSD4-206ENST00000532674 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
RPUSD4-206ENST00000532674 QTRT2Q9H974 415 aaKnown RBP28.4■■■□□ 2.14
RPUSD4-206ENST00000532674 C1orf167Q5SNV9 1468 aa28.36■■■□□ 2.13
RPUSD4-206ENST00000532674 NALCNQ8IZF0 1738 aa28.36■■■□□ 2.13
RPUSD4-206ENST00000532674 RBM6P78332 1123 aaKnown RBP28.36■■■□□ 2.13
RPUSD4-206ENST00000532674 NAIPQ13075 1403 aa28.35■■■□□ 2.13
RPUSD4-206ENST00000532674 NGLY1Q96IV0 654 aa28.34■■■□□ 2.13
RPUSD4-206ENST00000532674 KIF1BO60333 1816 aa28.34■■■□□ 2.13
RPUSD4-206ENST00000532674 ADAMTS2O95450 1211 aa28.33■■■□□ 2.13
RPUSD4-206ENST00000532674 ORAI2Q96SN7 254 aa28.33■■■□□ 2.13
RPUSD4-206ENST00000532674 ROBO2Q9HCK4 1378 aa28.33■■■□□ 2.13
RPUSD4-206ENST00000532674 PTCH1Q13635 1447 aa28.32■■■□□ 2.12
RPUSD4-206ENST00000532674 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
RPUSD4-206ENST00000532674 RRBP1Q9P2E9 1410 aaKnown RBP28.3■■■□□ 2.12
RPUSD4-206ENST00000532674 SOS2Q07890 1332 aaPredicted RBP28.29■■■□□ 2.12
RPUSD4-206ENST00000532674 RGS12O14924 1447 aa28.28■■■□□ 2.12
RPUSD4-206ENST00000532674 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
RPUSD4-206ENST00000532674 LAMC1P11047 1609 aa28.25■■■□□ 2.11
RPUSD4-206ENST00000532674 USP21Q9UK80 565 aa28.23■■■□□ 2.11
RPUSD4-206ENST00000532674 HFM1A2PYH4 1435 aa28.23■■■□□ 2.11
RPUSD4-206ENST00000532674 PRAG1Q86YV5 1406 aa28.23■■■□□ 2.11
RPUSD4-206ENST00000532674 TRPC5Q9UL62 973 aaPredicted RBP28.19■■■□□ 2.1
RPUSD4-206ENST00000532674 ESCO1Q5FWF5 840 aa28.18■■■□□ 2.1
RPUSD4-206ENST00000532674 FNBP4Q8N3X1 1017 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms