RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 RPGRIP1LQ68CZ1 1315 aa25.84■■□□□ 1.73
PPP1CA-208ENST00000532446 NEXMIFQ5QGS0 1516 aa25.82■■□□□ 1.72
PPP1CA-208ENST00000532446 UHRF1BP1Q6BDS2 1440 aa25.81■■□□□ 1.72
PPP1CA-208ENST00000532446 STAC3Q96MF2 364 aa25.8■■□□□ 1.72
PPP1CA-208ENST00000532446 KDM2AQ9Y2K7 1162 aa25.79■■□□□ 1.72
PPP1CA-208ENST00000532446 MYOM2P54296 1465 aa25.79■■□□□ 1.72
PPP1CA-208ENST00000532446 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
PPP1CA-208ENST00000532446 TMEM2Q9UHN6 1383 aa25.76■■□□□ 1.71
PPP1CA-208ENST00000532446 THEMISQ8N1K5 641 aaPredicted RBP25.76■■□□□ 1.71
PPP1CA-208ENST00000532446 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
PPP1CA-208ENST00000532446 SLIT1O75093 1534 aa25.75■■□□□ 1.71
PPP1CA-208ENST00000532446 ARHGAP23Q9P227 1491 aa25.74■■□□□ 1.71
PPP1CA-208ENST00000532446 PRAG1Q86YV5 1406 aa25.74■■□□□ 1.71
PPP1CA-208ENST00000532446 NRXN1Q9ULB1 1477 aa25.73■■□□□ 1.71
PPP1CA-208ENST00000532446 NBPF8Q3BBV2 869 aa25.73■■□□□ 1.71
PPP1CA-208ENST00000532446 ILDR1Q86SU0 546 aaPredicted RBP25.73■■□□□ 1.71
PPP1CA-208ENST00000532446 VGFO15240 615 aaPredicted RBP25.72■■□□□ 1.71
PPP1CA-208ENST00000532446 ADGRF5Q8IZF2 1346 aa25.72■■□□□ 1.71
PPP1CA-208ENST00000532446 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.7■■□□□ 1.7
PPP1CA-208ENST00000532446 HDGFP51858 240 aaKnown RBP25.69■■□□□ 1.7
PPP1CA-208ENST00000532446 NUTM2DQ5VT03 806 aaPredicted RBP25.69■■□□□ 1.7
PPP1CA-208ENST00000532446 TRPM1Q7Z4N2 1603 aa25.66■■□□□ 1.7
PPP1CA-208ENST00000532446 PIK3C2GO75747 1445 aa25.66■■□□□ 1.7
PPP1CA-208ENST00000532446 STRCQ7RTU9 1775 aa25.65■■□□□ 1.7
PPP1CA-208ENST00000532446 LTKP29376 864 aa25.65■■□□□ 1.7
PPP1CA-208ENST00000532446 KIAA1210Q9ULL0 1709 aa25.65■■□□□ 1.7
PPP1CA-208ENST00000532446 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.69
PPP1CA-208ENST00000532446 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
PPP1CA-208ENST00000532446 RALGAPBQ86X10 1494 aa25.63■■□□□ 1.69
PPP1CA-208ENST00000532446 SCAF11Q99590 1463 aaKnown RBP25.62■■□□□ 1.69
PPP1CA-208ENST00000532446 DMRT2Q9Y5R5 561 aa25.6■■□□□ 1.69
PPP1CA-208ENST00000532446 SETBP1Q9Y6X0 1596 aa25.59■■□□□ 1.69
PPP1CA-208ENST00000532446 LAMC1P11047 1609 aa25.59■■□□□ 1.69
PPP1CA-208ENST00000532446 C14orf93Q9H972 538 aaKnown RBP25.59■■□□□ 1.69
PPP1CA-208ENST00000532446 PLEKHG1Q9ULL1 1385 aa25.59■■□□□ 1.69
PPP1CA-208ENST00000532446 NRXN3Q9Y4C0 1643 aa25.58■■□□□ 1.69
PPP1CA-208ENST00000532446 ANKLE2Q86XL3 938 aa25.58■■□□□ 1.69
PPP1CA-208ENST00000532446 POLR1AO95602 1720 aaPredicted RBP25.58■■□□□ 1.68
PPP1CA-208ENST00000532446 CFAP70Q5T0N1 1121 aa25.57■■□□□ 1.68
PPP1CA-208ENST00000532446 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
PPP1CA-208ENST00000532446 ALKQ9UM73 1620 aa25.56■■□□□ 1.68
PPP1CA-208ENST00000532446 GPRASP1Q5JY77 1395 aa25.55■■□□□ 1.68
PPP1CA-208ENST00000532446 NBPF1Q3BBV0 1214 aa25.55■■□□□ 1.68
PPP1CA-208ENST00000532446 SETD1AO15047 1707 aaKnown RBP25.54■■□□□ 1.68
PPP1CA-208ENST00000532446 FBXO41Q8TF61 875 aa25.54■■□□□ 1.68
PPP1CA-208ENST00000532446 ROCK2O75116 1388 aaKnown RBP25.54■■□□□ 1.68
PPP1CA-208ENST00000532446 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
PPP1CA-208ENST00000532446 MED14O60244 1454 aa25.51■■□□□ 1.67
PPP1CA-208ENST00000532446 ADAMTS13Q76LX8 1427 aa25.51■■□□□ 1.67
PPP1CA-208ENST00000532446 ADGRB1O14514 1584 aa25.51■■□□□ 1.67
PPP1CA-208ENST00000532446 NCKAP5LQ9HCH0 1330 aa25.49■■□□□ 1.67
PPP1CA-208ENST00000532446 CARD11Q9BXL7 1154 aa25.48■■□□□ 1.67
PPP1CA-208ENST00000532446 ASXL1Q8IXJ9 1541 aa25.48■■□□□ 1.67
PPP1CA-208ENST00000532446 BCANQ96GW7 911 aa25.47■■□□□ 1.67
PPP1CA-208ENST00000532446 DIP2AQ14689 1571 aa25.47■■□□□ 1.67
PPP1CA-208ENST00000532446 NPHP4O75161 1426 aaPredicted RBP25.47■■□□□ 1.67
PPP1CA-208ENST00000532446 CERKQ8TCT0 537 aa25.46■■□□□ 1.67
PPP1CA-208ENST00000532446 TMEM132EQ6IEE7 984 aa25.44■■□□□ 1.66
PPP1CA-208ENST00000532446 TBX22Q9Y458 520 aa25.44■■□□□ 1.66
PPP1CA-208ENST00000532446 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
PPP1CA-208ENST00000532446 METP08581 1390 aa25.42■■□□□ 1.66
PPP1CA-208ENST00000532446 USP47Q96K76 1375 aa25.4■■□□□ 1.66
PPP1CA-208ENST00000532446 EIF4G2P78344 907 aaKnown RBP eCLIP25.39■■□□□ 1.65
PPP1CA-208ENST00000532446 YTHDC2Q9H6S0 1430 aaKnown RBP25.38■■□□□ 1.65
PPP1CA-208ENST00000532446 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
PPP1CA-208ENST00000532446 HSPA5P11021 654 aaKnown RBP25.35■■□□□ 1.65
PPP1CA-208ENST00000532446 PIK3R4Q99570 1358 aa25.35■■□□□ 1.65
PPP1CA-208ENST00000532446 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
PPP1CA-208ENST00000532446 ARHGEF28Q8N1W1 1705 aaKnown RBP25.34■■□□□ 1.65
PPP1CA-208ENST00000532446 PTPRUQ92729 1446 aa25.33■■□□□ 1.65
PPP1CA-208ENST00000532446 ABCC11Q96J66 1382 aa25.33■■□□□ 1.65
PPP1CA-208ENST00000532446 CHD2O14647 1828 aaKnown RBP25.33■■□□□ 1.65
PPP1CA-208ENST00000532446 STK26Q9P289 416 aa25.33■■□□□ 1.65
PPP1CA-208ENST00000532446 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
PPP1CA-208ENST00000532446 LTBP4Q8N2S1 1624 aa25.32■■□□□ 1.64
PPP1CA-208ENST00000532446 EIF3AQ14152 1382 aaKnown RBP25.31■■□□□ 1.64
PPP1CA-208ENST00000532446 DLC1Q96QB1 1528 aa25.31■■□□□ 1.64
PPP1CA-208ENST00000532446 TECPR2O15040 1411 aa25.31■■□□□ 1.64
PPP1CA-208ENST00000532446 XRN1Q8IZH2 1706 aaKnown RBP25.29■■□□□ 1.64
PPP1CA-208ENST00000532446 ST20-MTHFSA0A0A6YYL1 179 aa25.29■■□□□ 1.64
PPP1CA-208ENST00000532446 HIRIP3Q9BW71 556 aaPredicted RBP25.28■■□□□ 1.64
PPP1CA-208ENST00000532446 CPS1P31327 1500 aa25.28■■□□□ 1.64
PPP1CA-208ENST00000532446 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
PPP1CA-208ENST00000532446 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
PPP1CA-208ENST00000532446 NWD1Q149M9 1564 aa25.24■■□□□ 1.63
PPP1CA-208ENST00000532446 FAM135BQ49AJ0 1406 aa25.24■■□□□ 1.63
PPP1CA-208ENST00000532446 CENPJQ9HC77 1338 aaPredicted RBP25.24■■□□□ 1.63
PPP1CA-208ENST00000532446 QRICH2Q9H0J4 1663 aa25.23■■□□□ 1.63
PPP1CA-208ENST00000532446 TESK2Q96S53 571 aa25.22■■□□□ 1.63
PPP1CA-208ENST00000532446 PTCH1Q13635 1447 aa25.22■■□□□ 1.63
PPP1CA-208ENST00000532446 ROBO2Q9HCK4 1378 aa25.22■■□□□ 1.63
PPP1CA-208ENST00000532446 ZNF316A6NFI3 1004 aaPredicted RBP25.21■■□□□ 1.63
PPP1CA-208ENST00000532446 KCNA6P17658 529 aa25.21■■□□□ 1.63
PPP1CA-208ENST00000532446 PRAM1Q96QH2 718 aa25.21■■□□□ 1.63
PPP1CA-208ENST00000532446 ZNF335Q9H4Z2 1342 aaPredicted RBP25.21■■□□□ 1.63
PPP1CA-208ENST00000532446 IQSEC2Q5JU85 1478 aa25.21■■□□□ 1.63
PPP1CA-208ENST00000532446 SBNO2Q9Y2G9 1366 aa25.2■■□□□ 1.62
PPP1CA-208ENST00000532446 WAPLQ7Z5K2 1190 aa25.19■■□□□ 1.62
PPP1CA-208ENST00000532446 PLEKHH1Q9ULM0 1364 aa25.18■■□□□ 1.62
PPP1CA-208ENST00000532446 STRCP1A6NGW2 1772 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms