RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
AP003040.1-201ENST00000532044 KCNA6P17658 529 aa19.67■□□□□ 0.74
AP003040.1-201ENST00000532044 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
AP003040.1-201ENST00000532044 TMEM94Q12767 1356 aa19.67■□□□□ 0.74
AP003040.1-201ENST00000532044 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
AP003040.1-201ENST00000532044 CHD2O14647 1828 aaKnown RBP19.65■□□□□ 0.74
AP003040.1-201ENST00000532044 SLC26A8Q96RN1 970 aa19.64■□□□□ 0.73
AP003040.1-201ENST00000532044 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
AP003040.1-201ENST00000532044 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
AP003040.1-201ENST00000532044 RRBP1Q9P2E9 1410 aaKnown RBP19.63■□□□□ 0.73
AP003040.1-201ENST00000532044 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
AP003040.1-201ENST00000532044 NUP155O75694 1391 aa19.6■□□□□ 0.73
AP003040.1-201ENST00000532044 ROBO1Q9Y6N7 1651 aa19.58■□□□□ 0.72
AP003040.1-201ENST00000532044 SPHKAPQ2M3C7 1700 aa19.57■□□□□ 0.72
AP003040.1-201ENST00000532044 NRXN3Q9Y4C0 1643 aa19.57■□□□□ 0.72
AP003040.1-201ENST00000532044 TBX22Q9Y458 520 aa19.56■□□□□ 0.72
AP003040.1-201ENST00000532044 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
AP003040.1-201ENST00000532044 NAIPQ13075 1403 aa19.54■□□□□ 0.72
AP003040.1-201ENST00000532044 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
AP003040.1-201ENST00000532044 PROSER2Q86WR7 435 aaPredicted RBP19.54■□□□□ 0.72
AP003040.1-201ENST00000532044 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
AP003040.1-201ENST00000532044 PIK3R4Q99570 1358 aa19.53■□□□□ 0.72
AP003040.1-201ENST00000532044 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
AP003040.1-201ENST00000532044 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.52■□□□□ 0.72
AP003040.1-201ENST00000532044 TRPM2O94759 1503 aa19.51■□□□□ 0.71
AP003040.1-201ENST00000532044 ITGAEP38570 1179 aa19.51■□□□□ 0.71
AP003040.1-201ENST00000532044 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
AP003040.1-201ENST00000532044 CLTCL1P53675 1640 aa19.51■□□□□ 0.71
AP003040.1-201ENST00000532044 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
AP003040.1-201ENST00000532044 HDGFP51858 240 aaKnown RBP19.5■□□□□ 0.71
AP003040.1-201ENST00000532044 MSH6P52701 1360 aa19.49■□□□□ 0.71
AP003040.1-201ENST00000532044 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
AP003040.1-201ENST00000532044 NEXMIFQ5QGS0 1516 aa19.47■□□□□ 0.71
AP003040.1-201ENST00000532044 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
AP003040.1-201ENST00000532044 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
AP003040.1-201ENST00000532044 COL16A1Q07092 1604 aaPredicted RBP19.47■□□□□ 0.71
AP003040.1-201ENST00000532044 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.46■□□□□ 0.71
AP003040.1-201ENST00000532044 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
AP003040.1-201ENST00000532044 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
AP003040.1-201ENST00000532044 CHGAP10645 457 aaKnown RBP19.45■□□□□ 0.7
AP003040.1-201ENST00000532044 BCANQ96GW7 911 aa19.44■□□□□ 0.7
AP003040.1-201ENST00000532044 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
AP003040.1-201ENST00000532044 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
AP003040.1-201ENST00000532044 AHDC1Q5TGY3 1603 aaPredicted RBP19.42■□□□□ 0.7
AP003040.1-201ENST00000532044 DCCP43146 1447 aa19.41■□□□□ 0.7
AP003040.1-201ENST00000532044 SETD1AO15047 1707 aaKnown RBP19.4■□□□□ 0.7
AP003040.1-201ENST00000532044 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
AP003040.1-201ENST00000532044 METP08581 1390 aa19.39■□□□□ 0.69
AP003040.1-201ENST00000532044 KIF1BO60333 1816 aa19.37■□□□□ 0.69
AP003040.1-201ENST00000532044 PRAG1Q86YV5 1406 aa19.37■□□□□ 0.69
AP003040.1-201ENST00000532044 C19orf44Q9H6X5 657 aa19.37■□□□□ 0.69
AP003040.1-201ENST00000532044 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
AP003040.1-201ENST00000532044 JCADQ9P266 1359 aa19.35■□□□□ 0.69
AP003040.1-201ENST00000532044 MST1RQ04912 1400 aa19.34■□□□□ 0.69
AP003040.1-201ENST00000532044 SHPRHQ149N8 1683 aa19.33■□□□□ 0.69
AP003040.1-201ENST00000532044 LRP6O75581 1613 aa19.33■□□□□ 0.69
AP003040.1-201ENST00000532044 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.68
AP003040.1-201ENST00000532044 NALCNQ8IZF0 1738 aa19.33■□□□□ 0.68
AP003040.1-201ENST00000532044 ADGRL3Q9HAR2 1447 aa19.32■□□□□ 0.68
AP003040.1-201ENST00000532044 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
AP003040.1-201ENST00000532044 NHSL1Q5SYE7 1610 aa19.31■□□□□ 0.68
AP003040.1-201ENST00000532044 PTCH1Q13635 1447 aa19.31■□□□□ 0.68
AP003040.1-201ENST00000532044 PPLO60437 1756 aa19.31■□□□□ 0.68
AP003040.1-201ENST00000532044 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
AP003040.1-201ENST00000532044 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
AP003040.1-201ENST00000532044 BRINP3Q76B58 766 aa19.29■□□□□ 0.68
AP003040.1-201ENST00000532044 LAMC1P11047 1609 aa19.27■□□□□ 0.68
AP003040.1-201ENST00000532044 ATF3P18847 181 aa19.27■□□□□ 0.68
AP003040.1-201ENST00000532044 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
AP003040.1-201ENST00000532044 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
AP003040.1-201ENST00000532044 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
AP003040.1-201ENST00000532044 SPATA31A6Q5VVP1 1343 aa19.25■□□□□ 0.67
AP003040.1-201ENST00000532044 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
AP003040.1-201ENST00000532044 ROBO2Q9HCK4 1378 aa19.24■□□□□ 0.67
AP003040.1-201ENST00000532044 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
AP003040.1-201ENST00000532044 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
AP003040.1-201ENST00000532044 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
AP003040.1-201ENST00000532044 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
AP003040.1-201ENST00000532044 C1orf167Q5SNV9 1468 aa19.2■□□□□ 0.66
AP003040.1-201ENST00000532044 FOXD1Q16676 465 aa19.18■□□□□ 0.66
AP003040.1-201ENST00000532044 TECPR2O15040 1411 aa19.17■□□□□ 0.66
AP003040.1-201ENST00000532044 CDC42BPGQ6DT37 1551 aa19.16■□□□□ 0.66
AP003040.1-201ENST00000532044 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
AP003040.1-201ENST00000532044 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
AP003040.1-201ENST00000532044 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
AP003040.1-201ENST00000532044 PIK3C2GO75747 1445 aa19.14■□□□□ 0.65
AP003040.1-201ENST00000532044 KNDC1Q76NI1 1749 aa19.14■□□□□ 0.65
AP003040.1-201ENST00000532044 MPHOSPH9Q99550 1183 aa19.13■□□□□ 0.65
AP003040.1-201ENST00000532044 NRXN1Q9ULB1 1477 aa19.12■□□□□ 0.65
AP003040.1-201ENST00000532044 ANKRD30BQ9BXX2 1392 aa19.12■□□□□ 0.65
AP003040.1-201ENST00000532044 DDX17Q92841 729 aaKnown RBP19.12■□□□□ 0.65
AP003040.1-201ENST00000532044 SOS2Q07890 1332 aaPredicted RBP19.1■□□□□ 0.65
AP003040.1-201ENST00000532044 LRPPRCP42704 1394 aaKnown RBP19.09■□□□□ 0.65
AP003040.1-201ENST00000532044 COL22A1Q8NFW1 1626 aaPredicted RBP19.09■□□□□ 0.65
AP003040.1-201ENST00000532044 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
AP003040.1-201ENST00000532044 CDK12Q9NYV4 1490 aaPredicted RBP19.08■□□□□ 0.64
AP003040.1-201ENST00000532044 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
AP003040.1-201ENST00000532044 ZNF772Q68DY9 489 aaPredicted RBP19.07■□□□□ 0.64
AP003040.1-201ENST00000532044 ORAI2Q96SN7 254 aa19.07■□□□□ 0.64
AP003040.1-201ENST00000532044 MYOM2P54296 1465 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms