RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-220	ENST00000531733	PROSER2	Q86WR7	435 aa	Predicted RBP	32.57	■■■□□ 2.8
FDFT1-220	ENST00000531733	ZFYVE9	O95405	1425 aa		32.57	■■■□□ 2.8
FDFT1-220	ENST00000531733	GCC2	Q8IWJ2	1684 aa		32.56	■■■□□ 2.8
FDFT1-220	ENST00000531733	RGS17	Q9UGC6	210 aa	Predicted RBP	32.55	■■■□□ 2.8
FDFT1-220	ENST00000531733	UNC13B	O14795	1591 aa		32.53	■■■□□ 2.8
FDFT1-220	ENST00000531733	TMEM131L	A2VDJ0	1609 aa		32.53	■■■□□ 2.8
FDFT1-220	ENST00000531733	BCAN	Q96GW7	911 aa		32.52	■■■□□ 2.8
FDFT1-220	ENST00000531733	ROBO1	Q9Y6N7	1651 aa		32.52	■■■□□ 2.8
FDFT1-220	ENST00000531733	NKTR	P30414	1462 aa	Known RBP	32.51	■■■□□ 2.79
FDFT1-220	ENST00000531733	RIMS2	Q9UQ26	1411 aa		32.51	■■■□□ 2.79
FDFT1-220	ENST00000531733	PLEKHG1	Q9ULL1	1385 aa		32.49	■■■□□ 2.79
FDFT1-220	ENST00000531733		E9PCH4	1651 aa		32.48	■■■□□ 2.79
FDFT1-220	ENST00000531733	CHD2	O14647	1828 aa	Known RBP	32.45	■■■□□ 2.79
FDFT1-220	ENST00000531733	PPP1R15A	O75807	674 aa	Predicted RBP	32.43	■■■□□ 2.78
FDFT1-220	ENST00000531733	CHGA	P10645	457 aa	Known RBP	32.42	■■■□□ 2.78
FDFT1-220	ENST00000531733	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.42	■■■□□ 2.78
FDFT1-220	ENST00000531733	ROCK1	Q13464	1354 aa		32.42	■■■□□ 2.78
FDFT1-220	ENST00000531733	IQGAP3	Q86VI3	1631 aa		32.4	■■■□□ 2.78
FDFT1-220	ENST00000531733	MSH6	P52701	1360 aa		32.4	■■■□□ 2.78
FDFT1-220	ENST00000531733	ADAMTS13	Q76LX8	1427 aa		32.37	■■■□□ 2.77
FDFT1-220	ENST00000531733	SLAIN2	Q9P270	581 aa		32.36	■■■□□ 2.77
FDFT1-220	ENST00000531733	TBX22	Q9Y458	520 aa		32.36	■■■□□ 2.77
FDFT1-220	ENST00000531733	ITGAE	P38570	1179 aa		32.35	■■■□□ 2.77
FDFT1-220	ENST00000531733	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.35	■■■□□ 2.77
FDFT1-220	ENST00000531733	HDGF	P51858	240 aa	Known RBP	32.34	■■■□□ 2.77
FDFT1-220	ENST00000531733	NUP155	O75694	1391 aa		32.32	■■■□□ 2.77
FDFT1-220	ENST00000531733	POTEA	Q6S8J7	498 aa		32.32	■■■□□ 2.76
FDFT1-220	ENST00000531733	PHLPP1	O60346	1717 aa		32.31	■■■□□ 2.76
FDFT1-220	ENST00000531733	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
FDFT1-220	ENST00000531733	DIP2A	Q14689	1571 aa		32.25	■■■□□ 2.75
FDFT1-220	ENST00000531733	PTPRU	Q92729	1446 aa		32.24	■■■□□ 2.75
FDFT1-220	ENST00000531733	COL16A1	Q07092	1604 aa	Predicted RBP	32.23	■■■□□ 2.75
FDFT1-220	ENST00000531733	NCOA3	Q9Y6Q9	1424 aa		32.23	■■■□□ 2.75
FDFT1-220	ENST00000531733	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.23	■■■□□ 2.75
FDFT1-220	ENST00000531733	C14orf37	Q86TY3	774 aa		32.21	■■■□□ 2.75
FDFT1-220	ENST00000531733	PIK3R4	Q99570	1358 aa		32.2	■■■□□ 2.75
FDFT1-220	ENST00000531733	JCAD	Q9P266	1359 aa		32.19	■■■□□ 2.74
FDFT1-220	ENST00000531733	NRXN3	Q9Y4C0	1643 aa		32.18	■■■□□ 2.74
FDFT1-220	ENST00000531733	TRPM2	O94759	1503 aa		32.18	■■■□□ 2.74
FDFT1-220	ENST00000531733	AMOTL2	Q9Y2J4	779 aa		32.17	■■■□□ 2.74
FDFT1-220	ENST00000531733	SPHKAP	Q2M3C7	1700 aa		32.17	■■■□□ 2.74
FDFT1-220	ENST00000531733	C19orf44	Q9H6X5	657 aa		32.15	■■■□□ 2.74
FDFT1-220	ENST00000531733	LRP6	O75581	1613 aa		32.13	■■■□□ 2.73
FDFT1-220	ENST00000531733	CADPS2	Q86UW7	1296 aa		32.12	■■■□□ 2.73
FDFT1-220	ENST00000531733	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.11	■■■□□ 2.73
FDFT1-220	ENST00000531733	XRN1	Q8IZH2	1706 aa	Known RBP	32.1	■■■□□ 2.73
FDFT1-220	ENST00000531733	ATF3	P18847	181 aa		32.1	■■■□□ 2.73
FDFT1-220	ENST00000531733	SETBP1	Q9Y6X0	1596 aa		32.1	■■■□□ 2.73
FDFT1-220	ENST00000531733	SETD1A	O15047	1707 aa	Known RBP	32.08	■■■□□ 2.73
FDFT1-220	ENST00000531733	CLTCL1	P53675	1640 aa		32.07	■■■□□ 2.72
FDFT1-220	ENST00000531733	MET	P08581	1390 aa		32.07	■■■□□ 2.72
FDFT1-220	ENST00000531733	ZNF326	Q5BKZ1	582 aa	Known RBP	32.06	■■■□□ 2.72
FDFT1-220	ENST00000531733	BRINP3	Q76B58	766 aa		32.05	■■■□□ 2.72
FDFT1-220	ENST00000531733	SHPRH	Q149N8	1683 aa		32.02	■■■□□ 2.72
FDFT1-220	ENST00000531733	SPATA31A6	Q5VVP1	1343 aa		32.01	■■■□□ 2.72
FDFT1-220	ENST00000531733	NEXMIF	Q5QGS0	1516 aa		32.01	■■■□□ 2.72
FDFT1-220	ENST00000531733	NAIP	Q13075	1403 aa		32	■■■□□ 2.71
FDFT1-220	ENST00000531733	RRBP1	Q9P2E9	1410 aa	Known RBP	32	■■■□□ 2.71
FDFT1-220	ENST00000531733	DCC	P43146	1447 aa		31.99	■■■□□ 2.71
FDFT1-220	ENST00000531733	MST1R	Q04912	1400 aa		31.98	■■■□□ 2.71
FDFT1-220	ENST00000531733	ASXL1	Q8IXJ9	1541 aa		31.97	■■■□□ 2.71
FDFT1-220	ENST00000531733	MEX3C	Q5U5Q3	659 aa	Known RBP	31.95	■■■□□ 2.71
FDFT1-220	ENST00000531733	NALCN	Q8IZF0	1738 aa		31.91	■■■□□ 2.7
FDFT1-220	ENST00000531733	KIF1B	O60333	1816 aa		31.91	■■■□□ 2.7
FDFT1-220	ENST00000531733	NHSL1	Q5SYE7	1610 aa		31.9	■■■□□ 2.7
FDFT1-220	ENST00000531733	DDX17	Q92841	729 aa	Known RBP	31.9	■■■□□ 2.7
FDFT1-220	ENST00000531733	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.89	■■■□□ 2.7
FDFT1-220	ENST00000531733	NUTM2E	B1AL46	878 aa	Predicted RBP	31.89	■■■□□ 2.7
FDFT1-220	ENST00000531733	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.89	■■■□□ 2.7
FDFT1-220	ENST00000531733	ADGRL3	Q9HAR2	1447 aa		31.89	■■■□□ 2.7
FDFT1-220	ENST00000531733	SETD5	Q9C0A6	1442 aa		31.87	■■■□□ 2.69
FDFT1-220	ENST00000531733	ZNF772	Q68DY9	489 aa	Predicted RBP	31.86	■■■□□ 2.69
FDFT1-220	ENST00000531733	TRIM52	Q96A61	297 aa		31.84	■■■□□ 2.69
FDFT1-220	ENST00000531733	HFM1	A2PYH4	1435 aa		31.8	■■■□□ 2.68
FDFT1-220	ENST00000531733	ROBO2	Q9HCK4	1378 aa		31.79	■■■□□ 2.68
FDFT1-220	ENST00000531733	C1orf167	Q5SNV9	1468 aa		31.78	■■■□□ 2.68
FDFT1-220	ENST00000531733	PNPLA6	Q8IY17	1366 aa		31.77	■■■□□ 2.68
FDFT1-220	ENST00000531733	AFF2	P51816	1311 aa		31.76	■■■□□ 2.68
FDFT1-220	ENST00000531733	PTCH1	Q13635	1447 aa		31.76	■■■□□ 2.68
FDFT1-220	ENST00000531733	LRRC59	Q96AG4	307 aa	Known RBP	31.76	■■■□□ 2.67
FDFT1-220	ENST00000531733	VGF	O15240	615 aa	Predicted RBP	31.74	■■■□□ 2.67
FDFT1-220	ENST00000531733	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.74	■■■□□ 2.67
FDFT1-220	ENST00000531733	RXRB	P28702	533 aa		31.73	■■■□□ 2.67
FDFT1-220	ENST00000531733	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
FDFT1-220	ENST00000531733	PPL	O60437	1756 aa		31.73	■■■□□ 2.67
FDFT1-220	ENST00000531733	FOXD1	Q16676	465 aa		31.72	■■■□□ 2.67
FDFT1-220	ENST00000531733	ORAI2	Q96SN7	254 aa		31.7	■■■□□ 2.67
FDFT1-220	ENST00000531733	C8orf37	Q96NL8	207 aa		31.69	■■■□□ 2.66
FDFT1-220	ENST00000531733	RPGRIP1L	Q68CZ1	1315 aa		31.69	■■■□□ 2.66
FDFT1-220	ENST00000531733	LAMC1	P11047	1609 aa		31.68	■■■□□ 2.66
FDFT1-220	ENST00000531733	PRAG1	Q86YV5	1406 aa		31.68	■■■□□ 2.66
FDFT1-220	ENST00000531733	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.65	■■■□□ 2.66
FDFT1-220	ENST00000531733	SOS2	Q07890	1332 aa	Predicted RBP	31.62	■■■□□ 2.65
FDFT1-220	ENST00000531733	ADGRF5	Q8IZF2	1346 aa		31.61	■■■□□ 2.65
FDFT1-220	ENST00000531733	ADAMTS2	O95450	1211 aa		31.61	■■■□□ 2.65
FDFT1-220	ENST00000531733	QTRT2	Q9H974	415 aa	Known RBP	31.6	■■■□□ 2.65
FDFT1-220	ENST00000531733	RGS12	O14924	1447 aa		31.59	■■■□□ 2.65
FDFT1-220	ENST00000531733	SPATA31E1	Q6ZUB1	1445 aa		31.55	■■■□□ 2.64
FDFT1-220	ENST00000531733	RBM6	P78332	1123 aa	Known RBP	31.54	■■■□□ 2.64
FDFT1-220	ENST00000531733	RGL3	Q3MIN7	710 aa		31.54	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms