RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 FAM50AQ14320 339 aaKnown RBP29.54■■■□□ 2.32
UBXN1-212ENST00000531625 ZFYVE9O95405 1425 aa29.53■■■□□ 2.32
UBXN1-212ENST00000531625 RBM33Q96EV2 1170 aaKnown RBP29.52■■■□□ 2.32
UBXN1-212ENST00000531625 ROBO1Q9Y6N7 1651 aa29.51■■■□□ 2.31
UBXN1-212ENST00000531625 BCANQ96GW7 911 aa29.51■■■□□ 2.31
UBXN1-212ENST00000531625 PLEKHG1Q9ULL1 1385 aa29.51■■■□□ 2.31
UBXN1-212ENST00000531625 HDGFP51858 240 aaKnown RBP29.5■■■□□ 2.31
UBXN1-212ENST00000531625 MSH6P52701 1360 aa29.49■■■□□ 2.31
UBXN1-212ENST00000531625 RIMS2Q9UQ26 1411 aa29.46■■■□□ 2.31
UBXN1-212ENST00000531625 SLAIN2Q9P270 581 aa29.45■■■□□ 2.31
UBXN1-212ENST00000531625 CHD2O14647 1828 aaKnown RBP29.44■■■□□ 2.3
UBXN1-212ENST00000531625 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
UBXN1-212ENST00000531625 PPP1R15AO75807 674 aaPredicted RBP29.44■■■□□ 2.3
UBXN1-212ENST00000531625 TMEM131LA2VDJ0 1609 aa29.44■■■□□ 2.3
UBXN1-212ENST00000531625 TBX22Q9Y458 520 aa29.43■■■□□ 2.3
UBXN1-212ENST00000531625 GCC2Q8IWJ2 1684 aa29.42■■■□□ 2.3
UBXN1-212ENST00000531625 UNC13BO14795 1591 aa29.41■■■□□ 2.3
UBXN1-212ENST00000531625 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.41■■■□□ 2.3
UBXN1-212ENST00000531625 NCOA3Q9Y6Q9 1424 aa29.4■■■□□ 2.3
UBXN1-212ENST00000531625 POTEAQ6S8J7 498 aa29.4■■■□□ 2.3
UBXN1-212ENST00000531625 ROCK1Q13464 1354 aa29.37■■■□□ 2.29
UBXN1-212ENST00000531625 JCADQ9P266 1359 aa29.35■■■□□ 2.29
UBXN1-212ENST00000531625 PHLPP1O60346 1717 aa29.34■■■□□ 2.29
UBXN1-212ENST00000531625 CHGAP10645 457 aaKnown RBP29.33■■■□□ 2.29
UBXN1-212ENST00000531625 ADAMTS13Q76LX8 1427 aa29.33■■■□□ 2.29
UBXN1-212ENST00000531625 E9PCH4 1651 aa29.33■■■□□ 2.29
UBXN1-212ENST00000531625 PIK3R4Q99570 1358 aa29.32■■■□□ 2.28
UBXN1-212ENST00000531625 DIP2AQ14689 1571 aa29.3■■■□□ 2.28
UBXN1-212ENST00000531625 IQGAP3Q86VI3 1631 aa29.3■■■□□ 2.28
UBXN1-212ENST00000531625 C19orf44Q9H6X5 657 aa29.27■■■□□ 2.28
UBXN1-212ENST00000531625 NUTM2DQ5VT03 806 aaPredicted RBP29.26■■■□□ 2.27
UBXN1-212ENST00000531625 C14orf37Q86TY3 774 aa29.26■■■□□ 2.27
UBXN1-212ENST00000531625 CADPS2Q86UW7 1296 aa29.26■■■□□ 2.27
UBXN1-212ENST00000531625 COL16A1Q07092 1604 aaPredicted RBP29.26■■■□□ 2.27
UBXN1-212ENST00000531625 NUP155O75694 1391 aa29.25■■■□□ 2.27
UBXN1-212ENST00000531625 ATF3P18847 181 aa29.22■■■□□ 2.27
UBXN1-212ENST00000531625 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.22■■■□□ 2.27
UBXN1-212ENST00000531625 SPATA31A6Q5VVP1 1343 aa29.21■■■□□ 2.27
UBXN1-212ENST00000531625 TRPM2O94759 1503 aa29.2■■■□□ 2.27
UBXN1-212ENST00000531625 AMOTL2Q9Y2J4 779 aa29.19■■■□□ 2.26
UBXN1-212ENST00000531625 AHDC1Q5TGY3 1603 aaPredicted RBP29.19■■■□□ 2.26
UBXN1-212ENST00000531625 PTPRUQ92729 1446 aa29.17■■■□□ 2.26
UBXN1-212ENST00000531625 LRP6O75581 1613 aa29.15■■■□□ 2.26
UBXN1-212ENST00000531625 DCCP43146 1447 aa29.13■■■□□ 2.25
UBXN1-212ENST00000531625 ITGAEP38570 1179 aa29.11■■■□□ 2.25
UBXN1-212ENST00000531625 BRINP3Q76B58 766 aa29.11■■■□□ 2.25
UBXN1-212ENST00000531625 SHPRHQ149N8 1683 aa29.11■■■□□ 2.25
UBXN1-212ENST00000531625 SETBP1Q9Y6X0 1596 aa29.1■■■□□ 2.25
UBXN1-212ENST00000531625 ZNF772Q68DY9 489 aaPredicted RBP29.1■■■□□ 2.25
UBXN1-212ENST00000531625 MEX3CQ5U5Q3 659 aaKnown RBP29.09■■■□□ 2.25
UBXN1-212ENST00000531625 NRXN3Q9Y4C0 1643 aa29.09■■■□□ 2.25
UBXN1-212ENST00000531625 SETD1AO15047 1707 aaKnown RBP29.08■■■□□ 2.25
UBXN1-212ENST00000531625 XRN1Q8IZH2 1706 aaKnown RBP29.08■■■□□ 2.25
UBXN1-212ENST00000531625 SPHKAPQ2M3C7 1700 aa29.06■■■□□ 2.24
UBXN1-212ENST00000531625 ZNF326Q5BKZ1 582 aaKnown RBP29.03■■■□□ 2.24
UBXN1-212ENST00000531625 MST1RQ04912 1400 aa29.02■■■□□ 2.24
UBXN1-212ENST00000531625 METP08581 1390 aa29.01■■■□□ 2.24
UBXN1-212ENST00000531625 ASXL1Q8IXJ9 1541 aa29.01■■■□□ 2.23
UBXN1-212ENST00000531625 SETD5Q9C0A6 1442 aa29.01■■■□□ 2.23
UBXN1-212ENST00000531625 ADGRL3Q9HAR2 1447 aa28.96■■■□□ 2.23
UBXN1-212ENST00000531625 NHSL1Q5SYE7 1610 aa28.95■■■□□ 2.23
UBXN1-212ENST00000531625 LRRC59Q96AG4 307 aaKnown RBP28.95■■■□□ 2.22
UBXN1-212ENST00000531625 NEXMIFQ5QGS0 1516 aa28.94■■■□□ 2.22
UBXN1-212ENST00000531625 NUTM2BA6NNL0 878 aaPredicted RBP28.94■■■□□ 2.22
UBXN1-212ENST00000531625 NUTM2EB1AL46 878 aaPredicted RBP28.94■■■□□ 2.22
UBXN1-212ENST00000531625 RXRBP28702 533 aa28.94■■■□□ 2.22
UBXN1-212ENST00000531625 NUTM2AQ8IVF1 878 aaPredicted RBP28.94■■■□□ 2.22
UBXN1-212ENST00000531625 UPF1Q92900 1129 aaKnown RBP eCLIP28.94■■■□□ 2.22
UBXN1-212ENST00000531625 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
UBXN1-212ENST00000531625 CLTCL1P53675 1640 aa28.94■■■□□ 2.22
UBXN1-212ENST00000531625 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
UBXN1-212ENST00000531625 CDK12Q9NYV4 1490 aaPredicted RBP28.91■■■□□ 2.22
UBXN1-212ENST00000531625 AFF2P51816 1311 aa28.89■■■□□ 2.21
UBXN1-212ENST00000531625 NAIPQ13075 1403 aa28.87■■■□□ 2.21
UBXN1-212ENST00000531625 NALCNQ8IZF0 1738 aa28.86■■■□□ 2.21
UBXN1-212ENST00000531625 KIF1BO60333 1816 aa28.86■■■□□ 2.21
UBXN1-212ENST00000531625 PNPLA6Q8IY17 1366 aa28.86■■■□□ 2.21
UBXN1-212ENST00000531625 RRBP1Q9P2E9 1410 aaKnown RBP28.86■■■□□ 2.21
UBXN1-212ENST00000531625 PTCH1Q13635 1447 aa28.85■■■□□ 2.21
UBXN1-212ENST00000531625 VGFO15240 615 aaPredicted RBP28.84■■■□□ 2.21
UBXN1-212ENST00000531625 DDX17Q92841 729 aaKnown RBP28.84■■■□□ 2.21
UBXN1-212ENST00000531625 C1orf167Q5SNV9 1468 aa28.83■■■□□ 2.21
UBXN1-212ENST00000531625 PRAG1Q86YV5 1406 aa28.8■■■□□ 2.2
UBXN1-212ENST00000531625 RPGRIP1LQ68CZ1 1315 aa28.79■■■□□ 2.2
UBXN1-212ENST00000531625 C8orf37Q96NL8 207 aa28.79■■■□□ 2.2
UBXN1-212ENST00000531625 LAMC1P11047 1609 aa28.79■■■□□ 2.2
UBXN1-212ENST00000531625 ROBO2Q9HCK4 1378 aa28.78■■■□□ 2.2
UBXN1-212ENST00000531625 RBM6P78332 1123 aaKnown RBP28.77■■■□□ 2.2
UBXN1-212ENST00000531625 QTRT2Q9H974 415 aaKnown RBP28.77■■■□□ 2.2
UBXN1-212ENST00000531625 SOS2Q07890 1332 aaPredicted RBP28.75■■■□□ 2.19
UBXN1-212ENST00000531625 HFM1A2PYH4 1435 aa28.73■■■□□ 2.19
UBXN1-212ENST00000531625 ORAI2Q96SN7 254 aa28.73■■■□□ 2.19
UBXN1-212ENST00000531625 RGS12O14924 1447 aa28.71■■■□□ 2.19
UBXN1-212ENST00000531625 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
UBXN1-212ENST00000531625 SLC4A1APQ9BWU0 796 aaKnown RBP28.7■■■□□ 2.18
UBXN1-212ENST00000531625 ADAMTS2O95450 1211 aa28.69■■■□□ 2.18
UBXN1-212ENST00000531625 PPLO60437 1756 aa28.67■■■□□ 2.18
UBXN1-212ENST00000531625 FNBP4Q8N3X1 1017 aaPredicted RBP28.62■■■□□ 2.17
UBXN1-212ENST00000531625 USP21Q9UK80 565 aa28.61■■■□□ 2.17
UBXN1-212ENST00000531625 CDC42BPGQ6DT37 1551 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms