RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
TM9SF1-211ENST00000531406 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
TM9SF1-211ENST00000531406 UNC13BO14795 1591 aa19.65■□□□□ 0.74
TM9SF1-211ENST00000531406 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
TM9SF1-211ENST00000531406 ITGAEP38570 1179 aa19.64■□□□□ 0.73
TM9SF1-211ENST00000531406 PPARGC1BQ86YN6 1023 aaKnown RBP19.64■□□□□ 0.73
TM9SF1-211ENST00000531406 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.73
TM9SF1-211ENST00000531406 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
TM9SF1-211ENST00000531406 NUP155O75694 1391 aa19.62■□□□□ 0.73
TM9SF1-211ENST00000531406 CHGAP10645 457 aaKnown RBP19.62■□□□□ 0.73
TM9SF1-211ENST00000531406 XIRP1Q702N8 1843 aaKnown RBP19.62■□□□□ 0.73
TM9SF1-211ENST00000531406 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
TM9SF1-211ENST00000531406 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.61■□□□□ 0.73
TM9SF1-211ENST00000531406 TBX22Q9Y458 520 aa19.6■□□□□ 0.73
TM9SF1-211ENST00000531406 TMEM131LA2VDJ0 1609 aa19.6■□□□□ 0.73
TM9SF1-211ENST00000531406 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
TM9SF1-211ENST00000531406 GCC2Q8IWJ2 1684 aa19.59■□□□□ 0.73
TM9SF1-211ENST00000531406 NUTM2DQ5VT03 806 aaPredicted RBP19.57■□□□□ 0.72
TM9SF1-211ENST00000531406 IQGAP3Q86VI3 1631 aa19.57■□□□□ 0.72
TM9SF1-211ENST00000531406 MSH6P52701 1360 aa19.57■□□□□ 0.72
TM9SF1-211ENST00000531406 E9PCH4 1651 aa19.56■□□□□ 0.72
TM9SF1-211ENST00000531406 SLAIN2Q9P270 581 aa19.55■□□□□ 0.72
TM9SF1-211ENST00000531406 ADAMTS13Q76LX8 1427 aa19.53■□□□□ 0.72
TM9SF1-211ENST00000531406 RGS17Q9UGC6 210 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-211ENST00000531406 MYO5BQ9ULV0 1848 aa19.51■□□□□ 0.71
TM9SF1-211ENST00000531406 PIK3R4Q99570 1358 aa19.5■□□□□ 0.71
TM9SF1-211ENST00000531406 NCOA3Q9Y6Q9 1424 aa19.5■□□□□ 0.71
TM9SF1-211ENST00000531406 ROBO1Q9Y6N7 1651 aa19.49■□□□□ 0.71
TM9SF1-211ENST00000531406 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
TM9SF1-211ENST00000531406 C14orf37Q86TY3 774 aa19.47■□□□□ 0.71
TM9SF1-211ENST00000531406 DIP2AQ14689 1571 aa19.46■□□□□ 0.71
TM9SF1-211ENST00000531406 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
TM9SF1-211ENST00000531406 C19orf44Q9H6X5 657 aa19.45■□□□□ 0.7
TM9SF1-211ENST00000531406 AMOTL2Q9Y2J4 779 aa19.45■□□□□ 0.7
TM9SF1-211ENST00000531406 PTPRUQ92729 1446 aa19.43■□□□□ 0.7
TM9SF1-211ENST00000531406 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
TM9SF1-211ENST00000531406 CADPS2Q86UW7 1296 aa19.43■□□□□ 0.7
TM9SF1-211ENST00000531406 TRPM2O94759 1503 aa19.42■□□□□ 0.7
TM9SF1-211ENST00000531406 ATF3P18847 181 aa19.42■□□□□ 0.7
TM9SF1-211ENST00000531406 NAIPQ13075 1403 aa19.42■□□□□ 0.7
TM9SF1-211ENST00000531406 JCADQ9P266 1359 aa19.41■□□□□ 0.7
TM9SF1-211ENST00000531406 POTEAQ6S8J7 498 aa19.39■□□□□ 0.69
TM9SF1-211ENST00000531406 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
TM9SF1-211ENST00000531406 SPHKAPQ2M3C7 1700 aa19.37■□□□□ 0.69
TM9SF1-211ENST00000531406 METP08581 1390 aa19.36■□□□□ 0.69
TM9SF1-211ENST00000531406 PHLPP1O60346 1717 aa19.36■□□□□ 0.69
TM9SF1-211ENST00000531406 TRIM52Q96A61 297 aa19.35■□□□□ 0.69
TM9SF1-211ENST00000531406 NRXN3Q9Y4C0 1643 aa19.35■□□□□ 0.69
TM9SF1-211ENST00000531406 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
TM9SF1-211ENST00000531406 BRINP3Q76B58 766 aa19.34■□□□□ 0.69
TM9SF1-211ENST00000531406 COL16A1Q07092 1604 aaPredicted RBP19.33■□□□□ 0.69
TM9SF1-211ENST00000531406 HFM1A2PYH4 1435 aa19.33■□□□□ 0.68
TM9SF1-211ENST00000531406 DCCP43146 1447 aa19.33■□□□□ 0.68
TM9SF1-211ENST00000531406 CLTCL1P53675 1640 aa19.33■□□□□ 0.68
TM9SF1-211ENST00000531406 NEXMIFQ5QGS0 1516 aa19.31■□□□□ 0.68
TM9SF1-211ENST00000531406 SPATA31A6Q5VVP1 1343 aa19.31■□□□□ 0.68
TM9SF1-211ENST00000531406 AHDC1Q5TGY3 1603 aaPredicted RBP19.31■□□□□ 0.68
TM9SF1-211ENST00000531406 XRN1Q8IZH2 1706 aaKnown RBP19.31■□□□□ 0.68
TM9SF1-211ENST00000531406 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
TM9SF1-211ENST00000531406 VGFO15240 615 aaPredicted RBP19.28■□□□□ 0.68
TM9SF1-211ENST00000531406 MST1RQ04912 1400 aa19.27■□□□□ 0.68
TM9SF1-211ENST00000531406 LRP6O75581 1613 aa19.27■□□□□ 0.68
TM9SF1-211ENST00000531406 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
TM9SF1-211ENST00000531406 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
TM9SF1-211ENST00000531406 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
TM9SF1-211ENST00000531406 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
TM9SF1-211ENST00000531406 ROBO2Q9HCK4 1378 aa19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 FOXD1Q16676 465 aa19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 ZNF772Q68DY9 489 aaPredicted RBP19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 SETD5Q9C0A6 1442 aa19.21■□□□□ 0.67
TM9SF1-211ENST00000531406 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
TM9SF1-211ENST00000531406 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
TM9SF1-211ENST00000531406 LRRC59Q96AG4 307 aaKnown RBP19.2■□□□□ 0.66
TM9SF1-211ENST00000531406 KIF1BO60333 1816 aa19.19■□□□□ 0.66
TM9SF1-211ENST00000531406 DDX17Q92841 729 aaKnown RBP19.19■□□□□ 0.66
TM9SF1-211ENST00000531406 PRAG1Q86YV5 1406 aa19.17■□□□□ 0.66
TM9SF1-211ENST00000531406 C1orf167Q5SNV9 1468 aa19.16■□□□□ 0.66
TM9SF1-211ENST00000531406 NALCNQ8IZF0 1738 aa19.15■□□□□ 0.66
TM9SF1-211ENST00000531406 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
TM9SF1-211ENST00000531406 ORAI2Q96SN7 254 aa19.14■□□□□ 0.65
TM9SF1-211ENST00000531406 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
TM9SF1-211ENST00000531406 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
TM9SF1-211ENST00000531406 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.65
TM9SF1-211ENST00000531406 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
TM9SF1-211ENST00000531406 RGL3Q3MIN7 710 aa19.13■□□□□ 0.65
TM9SF1-211ENST00000531406 SETD1AO15047 1707 aaKnown RBP19.13■□□□□ 0.65
TM9SF1-211ENST00000531406 AFF2P51816 1311 aa19.12■□□□□ 0.65
TM9SF1-211ENST00000531406 RXRBP28702 533 aa19.12■□□□□ 0.65
TM9SF1-211ENST00000531406 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
TM9SF1-211ENST00000531406 SOS2Q07890 1332 aaPredicted RBP19.1■□□□□ 0.65
TM9SF1-211ENST00000531406 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
TM9SF1-211ENST00000531406 PPLO60437 1756 aa19.09■□□□□ 0.65
TM9SF1-211ENST00000531406 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.65
TM9SF1-211ENST00000531406 STK26Q9P289 416 aa19.08■□□□□ 0.64
TM9SF1-211ENST00000531406 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
TM9SF1-211ENST00000531406 LAMC1P11047 1609 aa19.05■□□□□ 0.64
TM9SF1-211ENST00000531406 ADAMTS2O95450 1211 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms