RNA–Protein interactions for RNA: ENST00000531351.1

NDUFS3-209, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 5

Gene NDUFS3, Length 423 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-209ENST00000531351 SLC26A8Q96RN1 970 aa23.06■■□□□ 1.28
NDUFS3-209ENST00000531351 IQGAP3Q86VI3 1631 aa23.05■■□□□ 1.28
NDUFS3-209ENST00000531351 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
NDUFS3-209ENST00000531351 BCANQ96GW7 911 aa23.01■■□□□ 1.27
NDUFS3-209ENST00000531351 ZFYVE9O95405 1425 aa23■■□□□ 1.27
NDUFS3-209ENST00000531351 RIMS2Q9UQ26 1411 aa22.99■■□□□ 1.27
NDUFS3-209ENST00000531351 NWD1Q149M9 1564 aa22.99■■□□□ 1.27
NDUFS3-209ENST00000531351 KCNA6P17658 529 aa22.99■■□□□ 1.27
NDUFS3-209ENST00000531351 TMEM94Q12767 1356 aa22.99■■□□□ 1.27
NDUFS3-209ENST00000531351 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
NDUFS3-209ENST00000531351 RBM33Q96EV2 1170 aaKnown RBP22.97■■□□□ 1.27
NDUFS3-209ENST00000531351 NUP155O75694 1391 aa22.97■■□□□ 1.27
NDUFS3-209ENST00000531351 PPP1R15AO75807 674 aaPredicted RBP22.96■■□□□ 1.27
NDUFS3-209ENST00000531351 PROSER2Q86WR7 435 aaPredicted RBP22.96■■□□□ 1.27
NDUFS3-209ENST00000531351 NKTRP30414 1462 aaKnown RBP22.96■■□□□ 1.27
NDUFS3-209ENST00000531351 CHD2O14647 1828 aaKnown RBP22.95■■□□□ 1.26
NDUFS3-209ENST00000531351 PLEKHG1Q9ULL1 1385 aa22.95■■□□□ 1.26
NDUFS3-209ENST00000531351 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
NDUFS3-209ENST00000531351 ROBO1Q9Y6N7 1651 aa22.9■■□□□ 1.26
NDUFS3-209ENST00000531351 HDGFP51858 240 aaKnown RBP22.9■■□□□ 1.26
NDUFS3-209ENST00000531351 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
NDUFS3-209ENST00000531351 PHF23Q9BUL5 403 aaPredicted RBP22.89■■□□□ 1.25
NDUFS3-209ENST00000531351 FAM135BQ49AJ0 1406 aa22.88■■□□□ 1.25
NDUFS3-209ENST00000531351 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.87■■□□□ 1.25
NDUFS3-209ENST00000531351 MSH6P52701 1360 aa22.85■■□□□ 1.25
NDUFS3-209ENST00000531351 DIP2AQ14689 1571 aa22.84■■□□□ 1.25
NDUFS3-209ENST00000531351 ADAMTS13Q76LX8 1427 aa22.84■■□□□ 1.25
NDUFS3-209ENST00000531351 NAIPQ13075 1403 aa22.83■■□□□ 1.25
NDUFS3-209ENST00000531351 TBX22Q9Y458 520 aa22.83■■□□□ 1.25
NDUFS3-209ENST00000531351 HFM1A2PYH4 1435 aa22.81■■□□□ 1.24
NDUFS3-209ENST00000531351 TRPM2O94759 1503 aa22.79■■□□□ 1.24
NDUFS3-209ENST00000531351 PHLPP1O60346 1717 aa22.78■■□□□ 1.24
NDUFS3-209ENST00000531351 CLTCL1P53675 1640 aa22.78■■□□□ 1.24
NDUFS3-209ENST00000531351 NRXN3Q9Y4C0 1643 aa22.77■■□□□ 1.24
NDUFS3-209ENST00000531351 C14orf37Q86TY3 774 aa22.76■■□□□ 1.23
NDUFS3-209ENST00000531351 SLAIN2Q9P270 581 aa22.76■■□□□ 1.23
NDUFS3-209ENST00000531351 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.76■■□□□ 1.23
NDUFS3-209ENST00000531351 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
NDUFS3-209ENST00000531351 PTPRUQ92729 1446 aa22.74■■□□□ 1.23
NDUFS3-209ENST00000531351 KIF1BO60333 1816 aa22.74■■□□□ 1.23
NDUFS3-209ENST00000531351 ZNF326Q5BKZ1 582 aaKnown RBP22.74■■□□□ 1.23
NDUFS3-209ENST00000531351 SETBP1Q9Y6X0 1596 aa22.73■■□□□ 1.23
NDUFS3-209ENST00000531351 NCOA3Q9Y6Q9 1424 aa22.73■■□□□ 1.23
NDUFS3-209ENST00000531351 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
NDUFS3-209ENST00000531351 AMOTL2Q9Y2J4 779 aa22.7■■□□□ 1.22
NDUFS3-209ENST00000531351 NEXMIFQ5QGS0 1516 aa22.7■■□□□ 1.22
NDUFS3-209ENST00000531351 RGS17Q9UGC6 210 aaPredicted RBP22.69■■□□□ 1.22
NDUFS3-209ENST00000531351 COL16A1Q07092 1604 aaPredicted RBP22.68■■□□□ 1.22
NDUFS3-209ENST00000531351 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
NDUFS3-209ENST00000531351 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
NDUFS3-209ENST00000531351 ATF3P18847 181 aa22.65■■□□□ 1.22
NDUFS3-209ENST00000531351 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
NDUFS3-209ENST00000531351 METP08581 1390 aa22.63■■□□□ 1.21
NDUFS3-209ENST00000531351 JCADQ9P266 1359 aa22.63■■□□□ 1.21
NDUFS3-209ENST00000531351 AHDC1Q5TGY3 1603 aaPredicted RBP22.61■■□□□ 1.21
NDUFS3-209ENST00000531351 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
NDUFS3-209ENST00000531351 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
NDUFS3-209ENST00000531351 DCCP43146 1447 aa22.58■■□□□ 1.21
NDUFS3-209ENST00000531351 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.21
NDUFS3-209ENST00000531351 SETD1AO15047 1707 aaKnown RBP22.58■■□□□ 1.21
NDUFS3-209ENST00000531351 POTEAQ6S8J7 498 aa22.58■■□□□ 1.21
NDUFS3-209ENST00000531351 SHPRHQ149N8 1683 aa22.57■■□□□ 1.2
NDUFS3-209ENST00000531351 PPLO60437 1756 aa22.57■■□□□ 1.2
NDUFS3-209ENST00000531351 BRINP3Q76B58 766 aa22.56■■□□□ 1.2
NDUFS3-209ENST00000531351 LRP6O75581 1613 aa22.54■■□□□ 1.2
NDUFS3-209ENST00000531351 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
NDUFS3-209ENST00000531351 ASXL1Q8IXJ9 1541 aa22.54■■□□□ 1.2
NDUFS3-209ENST00000531351 MST1RQ04912 1400 aa22.54■■□□□ 1.2
NDUFS3-209ENST00000531351 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
NDUFS3-209ENST00000531351 FOXD1Q16676 465 aa22.53■■□□□ 1.2
NDUFS3-209ENST00000531351 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
NDUFS3-209ENST00000531351 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
NDUFS3-209ENST00000531351 SPATA31A6Q5VVP1 1343 aa22.5■■□□□ 1.19
NDUFS3-209ENST00000531351 MEX3CQ5U5Q3 659 aaKnown RBP22.48■■□□□ 1.19
NDUFS3-209ENST00000531351 RPGRIP1LQ68CZ1 1315 aa22.48■■□□□ 1.19
NDUFS3-209ENST00000531351 PTCH1Q13635 1447 aa22.47■■□□□ 1.19
NDUFS3-209ENST00000531351 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
NDUFS3-209ENST00000531351 IFT172Q9UG01 1749 aa22.45■■□□□ 1.18
NDUFS3-209ENST00000531351 CCDC144AA2RUR9 1427 aa22.44■■□□□ 1.18
NDUFS3-209ENST00000531351 DDX17Q92841 729 aaKnown RBP22.44■■□□□ 1.18
NDUFS3-209ENST00000531351 NUTM2BA6NNL0 878 aaPredicted RBP22.43■■□□□ 1.18
NDUFS3-209ENST00000531351 NUTM2EB1AL46 878 aaPredicted RBP22.43■■□□□ 1.18
NDUFS3-209ENST00000531351 NUTM2AQ8IVF1 878 aaPredicted RBP22.43■■□□□ 1.18
NDUFS3-209ENST00000531351 C1orf167Q5SNV9 1468 aa22.41■■□□□ 1.18
NDUFS3-209ENST00000531351 MPHOSPH9Q99550 1183 aa22.41■■□□□ 1.18
NDUFS3-209ENST00000531351 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
NDUFS3-209ENST00000531351 RGL3Q3MIN7 710 aa22.4■■□□□ 1.18
NDUFS3-209ENST00000531351 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.18
NDUFS3-209ENST00000531351 SPATA31E1Q6ZUB1 1445 aa22.39■■□□□ 1.17
NDUFS3-209ENST00000531351 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
NDUFS3-209ENST00000531351 LAMC1P11047 1609 aa22.36■■□□□ 1.17
NDUFS3-209ENST00000531351 HRCP23327 699 aa22.36■■□□□ 1.17
NDUFS3-209ENST00000531351 LRRC59Q96AG4 307 aaKnown RBP22.36■■□□□ 1.17
NDUFS3-209ENST00000531351 PNPLA6Q8IY17 1366 aa22.36■■□□□ 1.17
NDUFS3-209ENST00000531351 ZNF772Q68DY9 489 aaPredicted RBP22.35■■□□□ 1.17
NDUFS3-209ENST00000531351 ORAI2Q96SN7 254 aa22.35■■□□□ 1.17
NDUFS3-209ENST00000531351 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.17
NDUFS3-209ENST00000531351 ANKRD30BQ9BXX2 1392 aa22.33■■□□□ 1.17
NDUFS3-209ENST00000531351 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.16
NDUFS3-209ENST00000531351 KNDC1Q76NI1 1749 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms