RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
SMPD1-205ENST00000531303 NEXMIFQ5QGS0 1516 aa27.25■■□□□ 1.95
SMPD1-205ENST00000531303 NBPF8Q3BBV2 869 aa27.25■■□□□ 1.95
SMPD1-205ENST00000531303 THEMISQ8N1K5 641 aaPredicted RBP27.25■■□□□ 1.95
SMPD1-205ENST00000531303 ZNF142P52746 1687 aaPredicted RBP27.23■■□□□ 1.95
SMPD1-205ENST00000531303 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
SMPD1-205ENST00000531303 ADGRF5Q8IZF2 1346 aa27.22■■□□□ 1.95
SMPD1-205ENST00000531303 TMEM2Q9UHN6 1383 aa27.2■■□□□ 1.95
SMPD1-205ENST00000531303 VGFO15240 615 aaPredicted RBP27.19■■□□□ 1.94
SMPD1-205ENST00000531303 PRAG1Q86YV5 1406 aa27.19■■□□□ 1.94
SMPD1-205ENST00000531303 STAC3Q96MF2 364 aa27.19■■□□□ 1.94
SMPD1-205ENST00000531303 MYOM2P54296 1465 aa27.18■■□□□ 1.94
SMPD1-205ENST00000531303 ZFYVE9O95405 1425 aa27.17■■□□□ 1.94
SMPD1-205ENST00000531303 HDGFP51858 240 aaKnown RBP27.16■■□□□ 1.94
SMPD1-205ENST00000531303 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.16■■□□□ 1.94
SMPD1-205ENST00000531303 TXNDC2Q86VQ3 553 aa27.15■■□□□ 1.94
SMPD1-205ENST00000531303 EID1Q9Y6B2 187 aa27.14■■□□□ 1.94
SMPD1-205ENST00000531303 LTKP29376 864 aa27.13■■□□□ 1.93
SMPD1-205ENST00000531303 SLIT1O75093 1534 aa27.12■■□□□ 1.93
SMPD1-205ENST00000531303 BCANQ96GW7 911 aa27.12■■□□□ 1.93
SMPD1-205ENST00000531303 ARHGAP23Q9P227 1491 aa27.12■■□□□ 1.93
SMPD1-205ENST00000531303 NRXN1Q9ULB1 1477 aa27.1■■□□□ 1.93
SMPD1-205ENST00000531303 CFAP70Q5T0N1 1121 aa27.09■■□□□ 1.93
SMPD1-205ENST00000531303 HSPA2P54652 639 aa27.08■■□□□ 1.93
SMPD1-205ENST00000531303 TRPM1Q7Z4N2 1603 aa27.08■■□□□ 1.93
SMPD1-205ENST00000531303 PIK3C2GO75747 1445 aa27.08■■□□□ 1.93
SMPD1-205ENST00000531303 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
SMPD1-205ENST00000531303 ANKLE2Q86XL3 938 aa27.06■■□□□ 1.92
SMPD1-205ENST00000531303 LMTK3Q96Q04 1460 aa27.06■■□□□ 1.92
SMPD1-205ENST00000531303 RALGAPBQ86X10 1494 aa27.05■■□□□ 1.92
SMPD1-205ENST00000531303 SCAF11Q99590 1463 aaKnown RBP27.05■■□□□ 1.92
SMPD1-205ENST00000531303 ROCK2O75116 1388 aaKnown RBP27.04■■□□□ 1.92
SMPD1-205ENST00000531303 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
SMPD1-205ENST00000531303 NCKAP5LQ9HCH0 1330 aa27.02■■□□□ 1.92
SMPD1-205ENST00000531303 CARD11Q9BXL7 1154 aa27.01■■□□□ 1.91
SMPD1-205ENST00000531303 PLEKHG1Q9ULL1 1385 aa27■■□□□ 1.91
SMPD1-205ENST00000531303 IQGAP1P46940 1657 aa27■■□□□ 1.91
SMPD1-205ENST00000531303 KIAA1210Q9ULL0 1709 aa27■■□□□ 1.91
SMPD1-205ENST00000531303 TMEM132EQ6IEE7 984 aa27■■□□□ 1.91
SMPD1-205ENST00000531303 ALKQ9UM73 1620 aa26.98■■□□□ 1.91
SMPD1-205ENST00000531303 NRXN3Q9Y4C0 1643 aa26.98■■□□□ 1.91
SMPD1-205ENST00000531303 POLR1AO95602 1720 aaPredicted RBP26.97■■□□□ 1.91
SMPD1-205ENST00000531303 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
SMPD1-205ENST00000531303 SETBP1Q9Y6X0 1596 aa26.96■■□□□ 1.91
SMPD1-205ENST00000531303 LAMC1P11047 1609 aa26.95■■□□□ 1.91
SMPD1-205ENST00000531303 ADAMTS13Q76LX8 1427 aa26.92■■□□□ 1.9
SMPD1-205ENST00000531303 HIRIP3Q9BW71 556 aaPredicted RBP26.92■■□□□ 1.9
SMPD1-205ENST00000531303 GPRASP1Q5JY77 1395 aa26.92■■□□□ 1.9
SMPD1-205ENST00000531303 NPHP4O75161 1426 aaPredicted RBP26.91■■□□□ 1.9
SMPD1-205ENST00000531303 AEBP2Q6ZN18 517 aaPredicted RBP26.91■■□□□ 1.9
SMPD1-205ENST00000531303 SETD1AO15047 1707 aaKnown RBP26.9■■□□□ 1.9
SMPD1-205ENST00000531303 STK26Q9P289 416 aa26.9■■□□□ 1.9
SMPD1-205ENST00000531303 ADGRB1O14514 1584 aa26.89■■□□□ 1.9
SMPD1-205ENST00000531303 ASXL1Q8IXJ9 1541 aa26.88■■□□□ 1.89
SMPD1-205ENST00000531303 METP08581 1390 aa26.88■■□□□ 1.89
SMPD1-205ENST00000531303 USP47Q96K76 1375 aa26.88■■□□□ 1.89
SMPD1-205ENST00000531303 EIF4G2P78344 907 aaKnown RBP eCLIP26.88■■□□□ 1.89
SMPD1-205ENST00000531303 HSPA5P11021 654 aaKnown RBP26.87■■□□□ 1.89
SMPD1-205ENST00000531303 TRAK1Q9UPV9 953 aa26.87■■□□□ 1.89
SMPD1-205ENST00000531303 MED14O60244 1454 aa26.86■■□□□ 1.89
SMPD1-205ENST00000531303 TBX22Q9Y458 520 aa26.86■■□□□ 1.89
SMPD1-205ENST00000531303 STRCQ7RTU9 1775 aa26.85■■□□□ 1.89
SMPD1-205ENST00000531303 YTHDC2Q9H6S0 1430 aaKnown RBP26.83■■□□□ 1.89
SMPD1-205ENST00000531303 DIP2AQ14689 1571 aa26.82■■□□□ 1.88
SMPD1-205ENST00000531303 ST20-MTHFSA0A0A6YYL1 179 aa26.8■■□□□ 1.88
SMPD1-205ENST00000531303 LRPPRCP42704 1394 aaKnown RBP26.78■■□□□ 1.88
SMPD1-205ENST00000531303 PTPRUQ92729 1446 aa26.76■■□□□ 1.87
SMPD1-205ENST00000531303 EIF3AQ14152 1382 aaKnown RBP26.76■■□□□ 1.87
SMPD1-205ENST00000531303 AMOTL2Q9Y2J4 779 aa26.75■■□□□ 1.87
SMPD1-205ENST00000531303 ARHGEF28Q8N1W1 1705 aaKnown RBP26.74■■□□□ 1.87
SMPD1-205ENST00000531303 SAFB2Q14151 953 aaKnown RBP eCLIP26.74■■□□□ 1.87
SMPD1-205ENST00000531303 ZNF316A6NFI3 1004 aaPredicted RBP26.73■■□□□ 1.87
SMPD1-205ENST00000531303 ABCC11Q96J66 1382 aa26.72■■□□□ 1.87
SMPD1-205ENST00000531303 PRAM1Q96QH2 718 aa26.72■■□□□ 1.87
SMPD1-205ENST00000531303 POGKQ9P215 609 aa26.72■■□□□ 1.87
SMPD1-205ENST00000531303 CHD2O14647 1828 aaKnown RBP26.71■■□□□ 1.87
SMPD1-205ENST00000531303 PIK3R4Q99570 1358 aa26.71■■□□□ 1.87
SMPD1-205ENST00000531303 WAPLQ7Z5K2 1190 aa26.7■■□□□ 1.87
SMPD1-205ENST00000531303 CENPJQ9HC77 1338 aaPredicted RBP26.7■■□□□ 1.86
SMPD1-205ENST00000531303 KNDC1Q76NI1 1749 aa26.69■■□□□ 1.86
SMPD1-205ENST00000531303 KCNA6P17658 529 aa26.68■■□□□ 1.86
SMPD1-205ENST00000531303 QRICH2Q9H0J4 1663 aa26.67■■□□□ 1.86
SMPD1-205ENST00000531303 ROBO2Q9HCK4 1378 aa26.67■■□□□ 1.86
SMPD1-205ENST00000531303 PLEKHH1Q9ULM0 1364 aa26.67■■□□□ 1.86
SMPD1-205ENST00000531303 XRN1Q8IZH2 1706 aaKnown RBP26.66■■□□□ 1.86
SMPD1-205ENST00000531303 DLC1Q96QB1 1528 aa26.66■■□□□ 1.86
SMPD1-205ENST00000531303 DMRT2Q9Y5R5 561 aa26.66■■□□□ 1.86
SMPD1-205ENST00000531303 TECPR2O15040 1411 aa26.65■■□□□ 1.86
SMPD1-205ENST00000531303 TESK2Q96S53 571 aa26.65■■□□□ 1.86
SMPD1-205ENST00000531303 CPS1P31327 1500 aa26.65■■□□□ 1.86
SMPD1-205ENST00000531303 MINK1Q8N4C8 1332 aaPredicted RBP26.63■■□□□ 1.85
SMPD1-205ENST00000531303 C11orf95C9JLR9 678 aaPredicted RBP26.62■■□□□ 1.85
SMPD1-205ENST00000531303 SIRT1Q96EB6 747 aa26.62■■□□□ 1.85
SMPD1-205ENST00000531303 POLR3GLQ9BT43 218 aa26.62■■□□□ 1.85
SMPD1-205ENST00000531303 FAM135BQ49AJ0 1406 aa26.61■■□□□ 1.85
SMPD1-205ENST00000531303 RBM33Q96EV2 1170 aaKnown RBP26.6■■□□□ 1.85
SMPD1-205ENST00000531303 STRCP1A6NGW2 1772 aa26.59■■□□□ 1.85
SMPD1-205ENST00000531303 PTCH1Q13635 1447 aa26.58■■□□□ 1.85
SMPD1-205ENST00000531303 TMF1P82094 1093 aa26.58■■□□□ 1.85
SMPD1-205ENST00000531303 NWD1Q149M9 1564 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms