RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 FOXD1Q16676 465 aa28.21■■■□□ 2.11
PACSIN3-208ENST00000531226 ZNF335Q9H4Z2 1342 aaPredicted RBP28.16■■■□□ 2.1
PACSIN3-208ENST00000531226 STRCP1A6NGW2 1772 aa28.14■■■□□ 2.09
PACSIN3-208ENST00000531226 CCDC144AA2RUR9 1427 aa28.13■■■□□ 2.09
PACSIN3-208ENST00000531226 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
PACSIN3-208ENST00000531226 NEXMIFQ5QGS0 1516 aa28.13■■■□□ 2.09
PACSIN3-208ENST00000531226 PLEKHG1Q9ULL1 1385 aa28.11■■■□□ 2.09
PACSIN3-208ENST00000531226 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.11■■■□□ 2.09
PACSIN3-208ENST00000531226 PPLO60437 1756 aa28.11■■■□□ 2.09
PACSIN3-208ENST00000531226 TRIM26Q12899 539 aaPredicted RBP28.1■■■□□ 2.09
PACSIN3-208ENST00000531226 PPP1R15AO75807 674 aaPredicted RBP28.09■■■□□ 2.09
PACSIN3-208ENST00000531226 CERKQ8TCT0 537 aa28.09■■■□□ 2.09
PACSIN3-208ENST00000531226 CPS1P31327 1500 aa28.08■■■□□ 2.09
PACSIN3-208ENST00000531226 ZNF326Q5BKZ1 582 aaKnown RBP28.08■■■□□ 2.09
PACSIN3-208ENST00000531226 IFT172Q9UG01 1749 aa28.06■■■□□ 2.08
PACSIN3-208ENST00000531226 DIP2AQ14689 1571 aa28.05■■■□□ 2.08
PACSIN3-208ENST00000531226 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
PACSIN3-208ENST00000531226 IQSEC2Q5JU85 1478 aa28.04■■■□□ 2.08
PACSIN3-208ENST00000531226 NUTM2DQ5VT03 806 aaPredicted RBP28.04■■■□□ 2.08
PACSIN3-208ENST00000531226 CHD2O14647 1828 aaKnown RBP28.03■■■□□ 2.08
PACSIN3-208ENST00000531226 SPATA31E1Q6ZUB1 1445 aa28.02■■■□□ 2.08
PACSIN3-208ENST00000531226 SETBP1Q9Y6X0 1596 aa28.02■■■□□ 2.08
PACSIN3-208ENST00000531226 ANKRD30BQ9BXX2 1392 aa28■■■□□ 2.07
PACSIN3-208ENST00000531226 NWD1Q149M9 1564 aa28■■■□□ 2.07
PACSIN3-208ENST00000531226 BCANQ96GW7 911 aa28■■■□□ 2.07
PACSIN3-208ENST00000531226 SLC26A8Q96RN1 970 aa28■■■□□ 2.07
PACSIN3-208ENST00000531226 ADAMTS13Q76LX8 1427 aa28■■■□□ 2.07
PACSIN3-208ENST00000531226 RPGRIP1LQ68CZ1 1315 aa27.97■■■□□ 2.07
PACSIN3-208ENST00000531226 SENP3Q9H4L4 574 aaPredicted RBP27.97■■■□□ 2.07
PACSIN3-208ENST00000531226 XIRP1Q702N8 1843 aaKnown RBP27.96■■■□□ 2.07
PACSIN3-208ENST00000531226 SETD1AO15047 1707 aaKnown RBP27.93■■■□□ 2.06
PACSIN3-208ENST00000531226 FBXO41Q8TF61 875 aa27.93■■■□□ 2.06
PACSIN3-208ENST00000531226 TBX22Q9Y458 520 aa27.93■■■□□ 2.06
PACSIN3-208ENST00000531226 LRRC7Q96NW7 1537 aa27.92■■■□□ 2.06
PACSIN3-208ENST00000531226 NKTRP30414 1462 aaKnown RBP27.9■■■□□ 2.06
PACSIN3-208ENST00000531226 VGFO15240 615 aaPredicted RBP27.9■■■□□ 2.06
PACSIN3-208ENST00000531226 PIK3R4Q99570 1358 aa27.89■■■□□ 2.06
PACSIN3-208ENST00000531226 KCNA6P17658 529 aa27.89■■■□□ 2.06
PACSIN3-208ENST00000531226 RGL3Q3MIN7 710 aa27.89■■■□□ 2.06
PACSIN3-208ENST00000531226 XRN1Q8IZH2 1706 aaKnown RBP27.86■■■□□ 2.05
PACSIN3-208ENST00000531226 ALKQ9UM73 1620 aa27.85■■■□□ 2.05
PACSIN3-208ENST00000531226 MYOM2P54296 1465 aa27.83■■■□□ 2.04
PACSIN3-208ENST00000531226 PTPRUQ92729 1446 aa27.81■■■□□ 2.04
PACSIN3-208ENST00000531226 DHX57Q6P158 1386 aaKnown RBP27.79■■■□□ 2.04
PACSIN3-208ENST00000531226 ADGRF5Q8IZF2 1346 aa27.79■■■□□ 2.04
PACSIN3-208ENST00000531226 METP08581 1390 aa27.78■■■□□ 2.04
PACSIN3-208ENST00000531226 NRXN1Q9ULB1 1477 aa27.77■■■□□ 2.04
PACSIN3-208ENST00000531226 PIK3C2GO75747 1445 aa27.77■■■□□ 2.04
PACSIN3-208ENST00000531226 LAMC1P11047 1609 aa27.77■■■□□ 2.04
PACSIN3-208ENST00000531226 TMEM94Q12767 1356 aa27.76■■■□□ 2.03
PACSIN3-208ENST00000531226 PROSER2Q86WR7 435 aaPredicted RBP27.75■■■□□ 2.03
PACSIN3-208ENST00000531226 AMOTL2Q9Y2J4 779 aa27.73■■■□□ 2.03
PACSIN3-208ENST00000531226 UBAP1LF5GYI3 381 aa27.72■■■□□ 2.03
PACSIN3-208ENST00000531226 ASXL1Q8IXJ9 1541 aa27.7■■■□□ 2.02
PACSIN3-208ENST00000531226 KNDC1Q76NI1 1749 aa27.69■■■□□ 2.02
PACSIN3-208ENST00000531226 NCOA3Q9Y6Q9 1424 aa27.68■■■□□ 2.02
PACSIN3-208ENST00000531226 PRAG1Q86YV5 1406 aa27.67■■■□□ 2.02
PACSIN3-208ENST00000531226 TOM1O60784 492 aa27.67■■■□□ 2.02
PACSIN3-208ENST00000531226 RBM33Q96EV2 1170 aaKnown RBP27.67■■■□□ 2.02
PACSIN3-208ENST00000531226 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.66■■■□□ 2.02
PACSIN3-208ENST00000531226 DCAF11Q8TEB1 546 aa27.65■■■□□ 2.02
PACSIN3-208ENST00000531226 PCGF6Q9BYE7 350 aa27.65■■■□□ 2.02
PACSIN3-208ENST00000531226 PTCH1Q13635 1447 aa27.65■■■□□ 2.02
PACSIN3-208ENST00000531226 STAC3Q96MF2 364 aa27.64■■■□□ 2.02
PACSIN3-208ENST00000531226 MSH6P52701 1360 aa27.63■■■□□ 2.01
PACSIN3-208ENST00000531226 NALCNQ8IZF0 1738 aa27.63■■■□□ 2.01
PACSIN3-208ENST00000531226 C14orf93Q9H972 538 aaKnown RBP27.61■■■□□ 2.01
PACSIN3-208ENST00000531226 KDM2AQ9Y2K7 1162 aa27.61■■■□□ 2.01
PACSIN3-208ENST00000531226 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
PACSIN3-208ENST00000531226 KIAA1210Q9ULL0 1709 aa27.59■■■□□ 2.01
PACSIN3-208ENST00000531226 TECPR2O15040 1411 aa27.58■■■□□ 2.01
PACSIN3-208ENST00000531226 LRPPRCP42704 1394 aaKnown RBP27.58■■■□□ 2.01
PACSIN3-208ENST00000531226 CFAP70Q5T0N1 1121 aa27.57■■■□□ 2
PACSIN3-208ENST00000531226 ROBO2Q9HCK4 1378 aa27.57■■■□□ 2
PACSIN3-208ENST00000531226 ADGRB1O14514 1584 aa27.56■■■□□ 2
PACSIN3-208ENST00000531226 C14orf37Q86TY3 774 aa27.56■■■□□ 2
PACSIN3-208ENST00000531226 YTHDC2Q9H6S0 1430 aaKnown RBP27.56■■■□□ 2
PACSIN3-208ENST00000531226 PIP4K2BP78356 416 aa27.55■■■□□ 2
PACSIN3-208ENST00000531226 TMEM132EQ6IEE7 984 aa27.55■■■□□ 2
PACSIN3-208ENST00000531226 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
PACSIN3-208ENST00000531226 ADGRL3Q9HAR2 1447 aa27.54■■■□□ 2
PACSIN3-208ENST00000531226 DCCP43146 1447 aa27.53■■■□□ 2
PACSIN3-208ENST00000531226 ABCC11Q96J66 1382 aa27.53■■■□□ 2
PACSIN3-208ENST00000531226 NEUROD1Q13562 356 aa27.53■■■□□ 2
PACSIN3-208ENST00000531226 C19orf44Q9H6X5 657 aa27.52■■■□□ 2
PACSIN3-208ENST00000531226 ROBO1Q9Y6N7 1651 aa27.52■■■□□ 2
PACSIN3-208ENST00000531226 STK26Q9P289 416 aa27.5■■□□□ 1.99
PACSIN3-208ENST00000531226 L3MBTL2Q969R5 705 aa27.49■■□□□ 1.99
PACSIN3-208ENST00000531226 DLC1Q96QB1 1528 aa27.48■■□□□ 1.99
PACSIN3-208ENST00000531226 CADPS2Q86UW7 1296 aa27.47■■□□□ 1.99
PACSIN3-208ENST00000531226 FAM135BQ49AJ0 1406 aa27.46■■□□□ 1.99
PACSIN3-208ENST00000531226 ARHGEF28Q8N1W1 1705 aaKnown RBP27.45■■□□□ 1.99
PACSIN3-208ENST00000531226 ATF3P18847 181 aa27.45■■□□□ 1.98
PACSIN3-208ENST00000531226 TRPM1Q7Z4N2 1603 aa27.44■■□□□ 1.98
PACSIN3-208ENST00000531226 CDC42BPGQ6DT37 1551 aa27.43■■□□□ 1.98
PACSIN3-208ENST00000531226 SLAIN2Q9P270 581 aa27.43■■□□□ 1.98
PACSIN3-208ENST00000531226 SIRT1Q96EB6 747 aa27.42■■□□□ 1.98
PACSIN3-208ENST00000531226 PLEKHH1Q9ULM0 1364 aa27.41■■□□□ 1.98
PACSIN3-208ENST00000531226 MST1RQ04912 1400 aa27.41■■□□□ 1.98
PACSIN3-208ENST00000531226 WAPLQ7Z5K2 1190 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms