RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
CHMP4A-204ENST00000530996 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
CHMP4A-204ENST00000530996 RBM33Q96EV2 1170 aaKnown RBP24.32■■□□□ 1.48
CHMP4A-204ENST00000530996 RIMS2Q9UQ26 1411 aa24.31■■□□□ 1.48
CHMP4A-204ENST00000530996 GCC2Q8IWJ2 1684 aa24.3■■□□□ 1.48
CHMP4A-204ENST00000530996 NWD1Q149M9 1564 aa24.3■■□□□ 1.48
CHMP4A-204ENST00000530996 ITGAEP38570 1179 aa24.29■■□□□ 1.48
CHMP4A-204ENST00000530996 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
CHMP4A-204ENST00000530996 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
CHMP4A-204ENST00000530996 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
CHMP4A-204ENST00000530996 MSH6P52701 1360 aa24.27■■□□□ 1.48
CHMP4A-204ENST00000530996 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
CHMP4A-204ENST00000530996 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
CHMP4A-204ENST00000530996 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
CHMP4A-204ENST00000530996 ROBO1Q9Y6N7 1651 aa24.23■■□□□ 1.47
CHMP4A-204ENST00000530996 E9PCH4 1651 aa24.22■■□□□ 1.47
CHMP4A-204ENST00000530996 IQGAP3Q86VI3 1631 aa24.22■■□□□ 1.47
CHMP4A-204ENST00000530996 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
CHMP4A-204ENST00000530996 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 NUP155O75694 1391 aa24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 NUTM2DQ5VT03 806 aaPredicted RBP24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
CHMP4A-204ENST00000530996 C14orf37Q86TY3 774 aa24.2■■□□□ 1.46
CHMP4A-204ENST00000530996 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
CHMP4A-204ENST00000530996 SLAIN2Q9P270 581 aa24.13■■□□□ 1.45
CHMP4A-204ENST00000530996 TBX22Q9Y458 520 aa24.12■■□□□ 1.45
CHMP4A-204ENST00000530996 ADAMTS13Q76LX8 1427 aa24.11■■□□□ 1.45
CHMP4A-204ENST00000530996 CHD2O14647 1828 aaKnown RBP24.1■■□□□ 1.45
CHMP4A-204ENST00000530996 TRPM2O94759 1503 aa24.1■■□□□ 1.45
CHMP4A-204ENST00000530996 PHLPP1O60346 1717 aa24.09■■□□□ 1.45
CHMP4A-204ENST00000530996 RGS17Q9UGC6 210 aaPredicted RBP24.08■■□□□ 1.45
CHMP4A-204ENST00000530996 PIK3R4Q99570 1358 aa24.07■■□□□ 1.44
CHMP4A-204ENST00000530996 ZNF326Q5BKZ1 582 aaKnown RBP24.06■■□□□ 1.44
CHMP4A-204ENST00000530996 NCOA3Q9Y6Q9 1424 aa24.06■■□□□ 1.44
CHMP4A-204ENST00000530996 JCADQ9P266 1359 aa24.05■■□□□ 1.44
CHMP4A-204ENST00000530996 ATF3P18847 181 aa24.04■■□□□ 1.44
CHMP4A-204ENST00000530996 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
CHMP4A-204ENST00000530996 CADPS2Q86UW7 1296 aa24.02■■□□□ 1.44
CHMP4A-204ENST00000530996 AMOTL2Q9Y2J4 779 aa24.01■■□□□ 1.43
CHMP4A-204ENST00000530996 COL16A1Q07092 1604 aaPredicted RBP24■■□□□ 1.43
CHMP4A-204ENST00000530996 PTPRUQ92729 1446 aa24■■□□□ 1.43
CHMP4A-204ENST00000530996 POTEAQ6S8J7 498 aa23.99■■□□□ 1.43
CHMP4A-204ENST00000530996 C19orf44Q9H6X5 657 aa23.99■■□□□ 1.43
CHMP4A-204ENST00000530996 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
CHMP4A-204ENST00000530996 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
CHMP4A-204ENST00000530996 MEX3CQ5U5Q3 659 aaKnown RBP23.97■■□□□ 1.43
CHMP4A-204ENST00000530996 RRBP1Q9P2E9 1410 aaKnown RBP23.96■■□□□ 1.43
CHMP4A-204ENST00000530996 CLTCL1P53675 1640 aa23.95■■□□□ 1.42
CHMP4A-204ENST00000530996 AHDC1Q5TGY3 1603 aaPredicted RBP23.95■■□□□ 1.42
CHMP4A-204ENST00000530996 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.42
CHMP4A-204ENST00000530996 DCCP43146 1447 aa23.93■■□□□ 1.42
CHMP4A-204ENST00000530996 XRN1Q8IZH2 1706 aaKnown RBP23.93■■□□□ 1.42
CHMP4A-204ENST00000530996 NAIPQ13075 1403 aa23.92■■□□□ 1.42
CHMP4A-204ENST00000530996 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 TRIM52Q96A61 297 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 LRP6O75581 1613 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 METP08581 1390 aa23.91■■□□□ 1.42
CHMP4A-204ENST00000530996 NEXMIFQ5QGS0 1516 aa23.9■■□□□ 1.42
CHMP4A-204ENST00000530996 BRINP3Q76B58 766 aa23.9■■□□□ 1.42
CHMP4A-204ENST00000530996 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
CHMP4A-204ENST00000530996 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
CHMP4A-204ENST00000530996 MST1RQ04912 1400 aa23.85■■□□□ 1.41
CHMP4A-204ENST00000530996 ADGRL3Q9HAR2 1447 aa23.85■■□□□ 1.41
CHMP4A-204ENST00000530996 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 SETD1AO15047 1707 aaKnown RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 NUTM2BA6NNL0 878 aaPredicted RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 NUTM2EB1AL46 878 aaPredicted RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 NUTM2AQ8IVF1 878 aaPredicted RBP23.84■■□□□ 1.41
CHMP4A-204ENST00000530996 KIF1BO60333 1816 aa23.82■■□□□ 1.4
CHMP4A-204ENST00000530996 ZNF772Q68DY9 489 aaPredicted RBP23.81■■□□□ 1.4
CHMP4A-204ENST00000530996 SLC4A1APQ9BWU0 796 aaKnown RBP23.81■■□□□ 1.4
CHMP4A-204ENST00000530996 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
CHMP4A-204ENST00000530996 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
CHMP4A-204ENST00000530996 VGFO15240 615 aaPredicted RBP23.77■■□□□ 1.4
CHMP4A-204ENST00000530996 NHSL1Q5SYE7 1610 aa23.76■■□□□ 1.39
CHMP4A-204ENST00000530996 SETD5Q9C0A6 1442 aa23.76■■□□□ 1.39
CHMP4A-204ENST00000530996 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
CHMP4A-204ENST00000530996 LRRC59Q96AG4 307 aaKnown RBP23.72■■□□□ 1.39
CHMP4A-204ENST00000530996 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
CHMP4A-204ENST00000530996 C1orf167Q5SNV9 1468 aa23.72■■□□□ 1.39
CHMP4A-204ENST00000530996 AFF2P51816 1311 aa23.71■■□□□ 1.39
CHMP4A-204ENST00000530996 RPGRIP1LQ68CZ1 1315 aa23.71■■□□□ 1.39
CHMP4A-204ENST00000530996 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
CHMP4A-204ENST00000530996 FOXD1Q16676 465 aa23.69■■□□□ 1.38
CHMP4A-204ENST00000530996 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
CHMP4A-204ENST00000530996 RXRBP28702 533 aa23.68■■□□□ 1.38
CHMP4A-204ENST00000530996 C8orf37Q96NL8 207 aa23.68■■□□□ 1.38
CHMP4A-204ENST00000530996 PPLO60437 1756 aa23.65■■□□□ 1.38
CHMP4A-204ENST00000530996 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.37
CHMP4A-204ENST00000530996 ORAI2Q96SN7 254 aa23.63■■□□□ 1.37
CHMP4A-204ENST00000530996 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
CHMP4A-204ENST00000530996 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
CHMP4A-204ENST00000530996 CDK12Q9NYV4 1490 aaPredicted RBP23.61■■□□□ 1.37
CHMP4A-204ENST00000530996 ADGRF5Q8IZF2 1346 aa23.59■■□□□ 1.37
CHMP4A-204ENST00000530996 STK26Q9P289 416 aa23.59■■□□□ 1.37
CHMP4A-204ENST00000530996 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
CHMP4A-204ENST00000530996 UPF1Q92900 1129 aaKnown RBP eCLIP23.58■■□□□ 1.37
CHMP4A-204ENST00000530996 NGLY1Q96IV0 654 aa23.57■■□□□ 1.36
CHMP4A-204ENST00000530996 LAMC1P11047 1609 aa23.56■■□□□ 1.36
CHMP4A-204ENST00000530996 ANKRD30BQ9BXX2 1392 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms