RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 NBPF3Q9H094 633 aa6.06□□□□□ -1.44
PTPN11-203ENST00000530818 DAXXQ9UER7 740 aaPredicted RBP6.06□□□□□ -1.44
PTPN11-203ENST00000530818 FAM217BQ9NTX9 383 aaPredicted RBP6.05□□□□□ -1.44
PTPN11-203ENST00000530818 SOWAHBA6NEL2 793 aa6.04□□□□□ -1.44
PTPN11-203ENST00000530818 BCAMP50895 628 aa6.04□□□□□ -1.44
PTPN11-203ENST00000530818 GIGYF2Q6Y7W6 1299 aaKnown RBP6.04□□□□□ -1.44
PTPN11-203ENST00000530818 GPCPD1Q9NPB8 672 aa6.04□□□□□ -1.44
PTPN11-203ENST00000530818 SSTR3P32745 418 aaPredicted RBP6.03□□□□□ -1.44
PTPN11-203ENST00000530818 MMRN1Q13201 1228 aa6.03□□□□□ -1.44
PTPN11-203ENST00000530818 WNT2BQ93097 391 aa6.03□□□□□ -1.44
PTPN11-203ENST00000530818 KDM4CQ9H3R0 1056 aa6.03□□□□□ -1.44
PTPN11-203ENST00000530818 MYT1LQ9UL68 1186 aa6.03□□□□□ -1.44
PTPN11-203ENST00000530818 CLCN1P35523 988 aa6.02□□□□□ -1.45
PTPN11-203ENST00000530818 THSD4Q6ZMP0 1018 aa6.02□□□□□ -1.45
PTPN11-203ENST00000530818 KCTD12Q96CX2 325 aaKnown RBP6.02□□□□□ -1.45
PTPN11-203ENST00000530818 STAC3Q96MF2 364 aa6.02□□□□□ -1.45
PTPN11-203ENST00000530818 FAM117AQ9C073 453 aa6.02□□□□□ -1.45
PTPN11-203ENST00000530818 DDX11L8A8MPP1 907 aa6.01□□□□□ -1.45
PTPN11-203ENST00000530818 CD46P15529 392 aa6.01□□□□□ -1.45
PTPN11-203ENST00000530818 NEUROD2Q15784 382 aa6.01□□□□□ -1.45
PTPN11-203ENST00000530818 WBP1LQ9NX94 342 aa6.01□□□□□ -1.45
PTPN11-203ENST00000530818 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.01□□□□□ -1.45
PTPN11-203ENST00000530818 PLEKHG3A1L390 1219 aa6□□□□□ -1.45
PTPN11-203ENST00000530818 GOLGA8CPA6NN73 597 aa6□□□□□ -1.45
PTPN11-203ENST00000530818 TTLL12Q14166 644 aaPredicted RBP6□□□□□ -1.45
PTPN11-203ENST00000530818 ANKK1Q8NFD2 765 aa5.99□□□□□ -1.45
PTPN11-203ENST00000530818 LRCH3Q96II8 777 aa5.99□□□□□ -1.45
PTPN11-203ENST00000530818 HPS5Q9UPZ3 1129 aa5.99□□□□□ -1.45
PTPN11-203ENST00000530818 GCGRP47871 477 aa5.98□□□□□ -1.45
PTPN11-203ENST00000530818 APLP1P51693 650 aa5.98□□□□□ -1.45
PTPN11-203ENST00000530818 HDGFP51858 240 aaKnown RBP5.98□□□□□ -1.45
PTPN11-203ENST00000530818 PTPN5P54829 565 aa5.98□□□□□ -1.45
PTPN11-203ENST00000530818 RNF166Q96A37 237 aaPredicted RBP5.98□□□□□ -1.45
PTPN11-203ENST00000530818 BEGAINQ9BUH8 593 aa5.98□□□□□ -1.45
PTPN11-203ENST00000530818 TSR3Q9UJK0 312 aaKnown RBP5.98□□□□□ -1.45
PTPN11-203ENST00000530818 SLF2Q8IX21 1173 aa5.97□□□□□ -1.45
PTPN11-203ENST00000530818 IL27Q8NEV9 243 aa5.97□□□□□ -1.45
PTPN11-203ENST00000530818 PPP4CP60510 307 aa5.96□□□□□ -1.46
PTPN11-203ENST00000530818 RNF40O75150 1001 aa5.95□□□□□ -1.46
PTPN11-203ENST00000530818 SULF1Q8IWU6 871 aa5.95□□□□□ -1.46
PTPN11-203ENST00000530818 RDH13Q8NBN7 331 aa5.95□□□□□ -1.46
PTPN11-203ENST00000530818 SPIRE2Q8WWL2 714 aa5.95□□□□□ -1.46
PTPN11-203ENST00000530818 HLA-CQ95604 372 aa5.95□□□□□ -1.46
PTPN11-203ENST00000530818 CFHP08603 1231 aa5.94□□□□□ -1.46
PTPN11-203ENST00000530818 FUT2Q10981 343 aa5.94□□□□□ -1.46
PTPN11-203ENST00000530818 FBXO31Q5XUX0 539 aaPredicted RBP5.94□□□□□ -1.46
PTPN11-203ENST00000530818 ACTN4O43707 911 aaKnown RBP5.93□□□□□ -1.46
PTPN11-203ENST00000530818 TBC1D2Q9BYX2 928 aa5.93□□□□□ -1.46
PTPN11-203ENST00000530818 MOXD2PA6NHM9 499 aa5.92□□□□□ -1.46
PTPN11-203ENST00000530818 KDM4AO75164 1064 aa5.92□□□□□ -1.46
PTPN11-203ENST00000530818 NDUFV2P19404 249 aa5.92□□□□□ -1.46
PTPN11-203ENST00000530818 GUCA2AQ02747 115 aa5.92□□□□□ -1.46
PTPN11-203ENST00000530818 PUS10Q3MIT2 529 aaKnown RBP5.92□□□□□ -1.46
PTPN11-203ENST00000530818 PCDHGC3Q9UN70 934 aa5.92□□□□□ -1.46
PTPN11-203ENST00000530818 TJAP1Q5JTD0 557 aa5.91□□□□□ -1.46
PTPN11-203ENST00000530818 MORN1Q5T089 497 aa5.91□□□□□ -1.46
PTPN11-203ENST00000530818 MYSM1Q5VVJ2 828 aa5.91□□□□□ -1.46
PTPN11-203ENST00000530818 HCSTQ9UBK5 93 aa5.91□□□□□ -1.46
PTPN11-203ENST00000530818 HOXA2O43364 376 aa5.9□□□□□ -1.46
PTPN11-203ENST00000530818 PROCA1Q8NCQ7 364 aaPredicted RBP5.9□□□□□ -1.46
PTPN11-203ENST00000530818 ZNF516Q92618 1163 aa5.9□□□□□ -1.46
PTPN11-203ENST00000530818 DDRGK1Q96HY6 314 aa5.9□□□□□ -1.46
PTPN11-203ENST00000530818 LIMD1Q9UGP4 676 aa5.9□□□□□ -1.46
PTPN11-203ENST00000530818 PCDHB15Q9Y5E8 787 aa5.9□□□□□ -1.46
PTPN11-203ENST00000530818 ATP6V1AP38606 617 aa5.89□□□□□ -1.47
PTPN11-203ENST00000530818 RSPH4AQ5TD94 716 aa5.89□□□□□ -1.47
PTPN11-203ENST00000530818 BLOC1S3Q6QNY0 202 aa5.89□□□□□ -1.47
PTPN11-203ENST00000530818 SCUBE3Q8IX30 993 aa5.89□□□□□ -1.47
PTPN11-203ENST00000530818 POLR3EQ9NVU0 708 aa5.89□□□□□ -1.47
PTPN11-203ENST00000530818 SLC27A5Q9Y2P5 690 aa5.89□□□□□ -1.47
PTPN11-203ENST00000530818 SPTLC1O15269 473 aa5.88□□□□□ -1.47
PTPN11-203ENST00000530818 SKIV2LQ15477 1246 aaKnown RBP5.88□□□□□ -1.47
PTPN11-203ENST00000530818 KMT5BQ4FZB7 885 aa5.88□□□□□ -1.47
PTPN11-203ENST00000530818 RSBN1LQ6PCB5 846 aaPredicted RBP5.88□□□□□ -1.47
PTPN11-203ENST00000530818 RIC3Q7Z5B4 369 aa5.88□□□□□ -1.47
PTPN11-203ENST00000530818 NUTM1Q86Y26 1132 aa5.88□□□□□ -1.47
PTPN11-203ENST00000530818 SYMPKQ92797 1274 aaKnown RBP5.88□□□□□ -1.47
PTPN11-203ENST00000530818 THAP11Q96EK4 314 aa5.88□□□□□ -1.47
PTPN11-203ENST00000530818 MTRQ99707 1265 aa5.88□□□□□ -1.47
PTPN11-203ENST00000530818 SLC4A3P48751 1232 aa5.87□□□□□ -1.47
PTPN11-203ENST00000530818 COPS2P61201 443 aa5.87□□□□□ -1.47
PTPN11-203ENST00000530818 SH3D19Q5HYK7 790 aa5.87□□□□□ -1.47
PTPN11-203ENST00000530818 NYAP1Q6ZVC0 841 aa5.87□□□□□ -1.47
PTPN11-203ENST00000530818 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPN11-203ENST00000530818 PCDHB3Q9Y5E6 796 aa5.87□□□□□ -1.47
PTPN11-203ENST00000530818 USP46P62068 366 aa5.86□□□□□ -1.47
PTPN11-203ENST00000530818 BRICD5Q6PL45 260 aa5.86□□□□□ -1.47
PTPN11-203ENST00000530818 NKX2-3Q8TAU0 364 aa5.86□□□□□ -1.47
PTPN11-203ENST00000530818 GOPCQ9HD26 462 aa5.86□□□□□ -1.47
PTPN11-203ENST00000530818 ZPR1O75312 459 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 FDX1P10109 184 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 QPCTQ16769 361 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 TMEM132AQ24JP5 1023 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 RNF19BQ6ZMZ0 732 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 FAM160A2Q8N612 972 aaPredicted RBP5.85□□□□□ -1.47
PTPN11-203ENST00000530818 NECTIN2Q92692 538 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 RSPH6AQ9H0K4 717 aa5.85□□□□□ -1.47
PTPN11-203ENST00000530818 LILRB3O75022 631 aa5.84□□□□□ -1.47
PTPN11-203ENST00000530818 ITGBL1O95965 494 aaPredicted RBP5.84□□□□□ -1.47
PTPN11-203ENST00000530818 GJA5P36382 358 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms