RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 ZFYVE9O95405 1425 aa25.97■■□□□ 1.75
PKP3-207ENST00000530695 NUP155O75694 1391 aa25.96■■□□□ 1.75
PKP3-207ENST00000530695 KCNA6P17658 529 aa25.96■■□□□ 1.75
PKP3-207ENST00000530695 RIMS2Q9UQ26 1411 aa25.95■■□□□ 1.74
PKP3-207ENST00000530695 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.74
PKP3-207ENST00000530695 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
PKP3-207ENST00000530695 HDGFP51858 240 aaKnown RBP25.93■■□□□ 1.74
PKP3-207ENST00000530695 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
PKP3-207ENST00000530695 NWD1Q149M9 1564 aa25.93■■□□□ 1.74
PKP3-207ENST00000530695 PPP1R15AO75807 674 aaPredicted RBP25.92■■□□□ 1.74
PKP3-207ENST00000530695 CHD2O14647 1828 aaKnown RBP25.92■■□□□ 1.74
PKP3-207ENST00000530695 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
PKP3-207ENST00000530695 PLEKHG1Q9ULL1 1385 aa25.92■■□□□ 1.74
PKP3-207ENST00000530695 SOCS7O14512 581 aa25.9■■□□□ 1.74
PKP3-207ENST00000530695 PROSER2Q86WR7 435 aaPredicted RBP25.9■■□□□ 1.74
PKP3-207ENST00000530695 NKTRP30414 1462 aaKnown RBP25.9■■□□□ 1.74
PKP3-207ENST00000530695 RRBP1Q9P2E9 1410 aaKnown RBP25.88■■□□□ 1.73
PKP3-207ENST00000530695 SPHKAPQ2M3C7 1700 aa25.88■■□□□ 1.73
PKP3-207ENST00000530695 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.87■■□□□ 1.73
PKP3-207ENST00000530695 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
PKP3-207ENST00000530695 NUTM2DQ5VT03 806 aaPredicted RBP25.83■■□□□ 1.73
PKP3-207ENST00000530695 ROBO1Q9Y6N7 1651 aa25.8■■□□□ 1.72
PKP3-207ENST00000530695 FAM135BQ49AJ0 1406 aa25.8■■□□□ 1.72
PKP3-207ENST00000530695 TBX22Q9Y458 520 aa25.8■■□□□ 1.72
PKP3-207ENST00000530695 DIP2AQ14689 1571 aa25.8■■□□□ 1.72
PKP3-207ENST00000530695 MSH6P52701 1360 aa25.78■■□□□ 1.72
PKP3-207ENST00000530695 NAIPQ13075 1403 aa25.78■■□□□ 1.72
PKP3-207ENST00000530695 ADAMTS13Q76LX8 1427 aa25.78■■□□□ 1.72
PKP3-207ENST00000530695 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
PKP3-207ENST00000530695 CLTCL1P53675 1640 aa25.73■■□□□ 1.71
PKP3-207ENST00000530695 TRPM2O94759 1503 aa25.73■■□□□ 1.71
PKP3-207ENST00000530695 KIF1BO60333 1816 aa25.72■■□□□ 1.71
PKP3-207ENST00000530695 PIK3R4Q99570 1358 aa25.72■■□□□ 1.71
PKP3-207ENST00000530695 ZNF326Q5BKZ1 582 aaKnown RBP25.7■■□□□ 1.7
PKP3-207ENST00000530695 NRXN3Q9Y4C0 1643 aa25.7■■□□□ 1.7
PKP3-207ENST00000530695 HFM1A2PYH4 1435 aa25.69■■□□□ 1.7
PKP3-207ENST00000530695 NCOA3Q9Y6Q9 1424 aa25.69■■□□□ 1.7
PKP3-207ENST00000530695 SLAIN2Q9P270 581 aa25.68■■□□□ 1.7
PKP3-207ENST00000530695 C14orf37Q86TY3 774 aa25.67■■□□□ 1.7
PKP3-207ENST00000530695 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.67■■□□□ 1.7
PKP3-207ENST00000530695 SETBP1Q9Y6X0 1596 aa25.67■■□□□ 1.7
PKP3-207ENST00000530695 PHLPP1O60346 1717 aa25.66■■□□□ 1.7
PKP3-207ENST00000530695 TRIM52Q96A61 297 aa25.65■■□□□ 1.7
PKP3-207ENST00000530695 AMOTL2Q9Y2J4 779 aa25.64■■□□□ 1.7
PKP3-207ENST00000530695 PTPRUQ92729 1446 aa25.63■■□□□ 1.69
PKP3-207ENST00000530695 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
PKP3-207ENST00000530695 XRN1Q8IZH2 1706 aaKnown RBP25.63■■□□□ 1.69
PKP3-207ENST00000530695 C19orf44Q9H6X5 657 aa25.6■■□□□ 1.69
PKP3-207ENST00000530695 ATF3P18847 181 aa25.58■■□□□ 1.69
PKP3-207ENST00000530695 CADPS2Q86UW7 1296 aa25.58■■□□□ 1.69
PKP3-207ENST00000530695 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
PKP3-207ENST00000530695 METP08581 1390 aa25.56■■□□□ 1.68
PKP3-207ENST00000530695 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
PKP3-207ENST00000530695 RGS17Q9UGC6 210 aaPredicted RBP25.53■■□□□ 1.68
PKP3-207ENST00000530695 JCADQ9P266 1359 aa25.51■■□□□ 1.67
PKP3-207ENST00000530695 PPLO60437 1756 aa25.51■■□□□ 1.67
PKP3-207ENST00000530695 DCCP43146 1447 aa25.5■■□□□ 1.67
PKP3-207ENST00000530695 SETD1AO15047 1707 aaKnown RBP25.49■■□□□ 1.67
PKP3-207ENST00000530695 AHDC1Q5TGY3 1603 aaPredicted RBP25.49■■□□□ 1.67
PKP3-207ENST00000530695 VGFO15240 615 aaPredicted RBP25.48■■□□□ 1.67
PKP3-207ENST00000530695 NALCNQ8IZF0 1738 aa25.46■■□□□ 1.67
PKP3-207ENST00000530695 RPGRIP1LQ68CZ1 1315 aa25.45■■□□□ 1.66
PKP3-207ENST00000530695 FOXD1Q16676 465 aa25.45■■□□□ 1.66
PKP3-207ENST00000530695 SHPRHQ149N8 1683 aa25.43■■□□□ 1.66
PKP3-207ENST00000530695 BRINP3Q76B58 766 aa25.43■■□□□ 1.66
PKP3-207ENST00000530695 ADGRL3Q9HAR2 1447 aa25.43■■□□□ 1.66
PKP3-207ENST00000530695 MST1RQ04912 1400 aa25.42■■□□□ 1.66
PKP3-207ENST00000530695 ASXL1Q8IXJ9 1541 aa25.41■■□□□ 1.66
PKP3-207ENST00000530695 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.66
PKP3-207ENST00000530695 NHSL1Q5SYE7 1610 aa25.39■■□□□ 1.66
PKP3-207ENST00000530695 POTEAQ6S8J7 498 aa25.39■■□□□ 1.66
PKP3-207ENST00000530695 MPHOSPH9Q99550 1183 aa25.39■■□□□ 1.66
PKP3-207ENST00000530695 SPATA31A6Q5VVP1 1343 aa25.38■■□□□ 1.65
PKP3-207ENST00000530695 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
PKP3-207ENST00000530695 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
PKP3-207ENST00000530695 LRP6O75581 1613 aa25.36■■□□□ 1.65
PKP3-207ENST00000530695 ROBO2Q9HCK4 1378 aa25.34■■□□□ 1.65
PKP3-207ENST00000530695 SPATA31E1Q6ZUB1 1445 aa25.32■■□□□ 1.64
PKP3-207ENST00000530695 PRAG1Q86YV5 1406 aa25.32■■□□□ 1.64
PKP3-207ENST00000530695 RGL3Q3MIN7 710 aa25.32■■□□□ 1.64
PKP3-207ENST00000530695 MEX3CQ5U5Q3 659 aaKnown RBP25.32■■□□□ 1.64
PKP3-207ENST00000530695 ADGRF5Q8IZF2 1346 aa25.3■■□□□ 1.64
PKP3-207ENST00000530695 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
PKP3-207ENST00000530695 ACIN1Q9UKV3 1341 aaKnown RBP25.29■■□□□ 1.64
PKP3-207ENST00000530695 C1orf167Q5SNV9 1468 aa25.28■■□□□ 1.64
PKP3-207ENST00000530695 ANKRD30BQ9BXX2 1392 aa25.28■■□□□ 1.64
PKP3-207ENST00000530695 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
PKP3-207ENST00000530695 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
PKP3-207ENST00000530695 NUTM2BA6NNL0 878 aaPredicted RBP25.25■■□□□ 1.63
PKP3-207ENST00000530695 NUTM2EB1AL46 878 aaPredicted RBP25.25■■□□□ 1.63
PKP3-207ENST00000530695 NUTM2AQ8IVF1 878 aaPredicted RBP25.25■■□□□ 1.63
PKP3-207ENST00000530695 LAMC1P11047 1609 aa25.24■■□□□ 1.63
PKP3-207ENST00000530695 ZNF772Q68DY9 489 aaPredicted RBP25.23■■□□□ 1.63
PKP3-207ENST00000530695 KNDC1Q76NI1 1749 aa25.21■■□□□ 1.63
PKP3-207ENST00000530695 PIK3C2GO75747 1445 aa25.2■■□□□ 1.63
PKP3-207ENST00000530695 CDC42BPGQ6DT37 1551 aa25.2■■□□□ 1.62
PKP3-207ENST00000530695 ORAI2Q96SN7 254 aa25.2■■□□□ 1.62
PKP3-207ENST00000530695 STK26Q9P289 416 aa25.2■■□□□ 1.62
PKP3-207ENST00000530695 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
PKP3-207ENST00000530695 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms