RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 APLP2Q06481 763 aa13.51□□□□□ -0.25
USP35-205ENST00000530521 TRIM52Q96A61 297 aa13.51□□□□□ -0.25
USP35-205ENST00000530521 NOS1P29475 1434 aa13.5□□□□□ -0.25
USP35-205ENST00000530521 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
USP35-205ENST00000530521 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
USP35-205ENST00000530521 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
USP35-205ENST00000530521 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
USP35-205ENST00000530521 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
USP35-205ENST00000530521 ADGRB3O60242 1522 aa13.49□□□□□ -0.25
USP35-205ENST00000530521 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
USP35-205ENST00000530521 JCADQ9P266 1359 aa13.48□□□□□ -0.25
USP35-205ENST00000530521 GCC2Q8IWJ2 1684 aa13.48□□□□□ -0.25
USP35-205ENST00000530521 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
USP35-205ENST00000530521 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
USP35-205ENST00000530521 NWD1Q149M9 1564 aa13.48□□□□□ -0.25
USP35-205ENST00000530521 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
USP35-205ENST00000530521 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
USP35-205ENST00000530521 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
USP35-205ENST00000530521 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP35-205ENST00000530521 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
USP35-205ENST00000530521 LRP6O75581 1613 aa13.46□□□□□ -0.25
USP35-205ENST00000530521 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.25
USP35-205ENST00000530521 NKTRP30414 1462 aaKnown RBP13.46□□□□□ -0.25
USP35-205ENST00000530521 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.45□□□□□ -0.26
USP35-205ENST00000530521 TBX22Q9Y458 520 aa13.45□□□□□ -0.26
USP35-205ENST00000530521 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
USP35-205ENST00000530521 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
USP35-205ENST00000530521 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
USP35-205ENST00000530521 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
USP35-205ENST00000530521 ATF3P18847 181 aa13.43□□□□□ -0.26
USP35-205ENST00000530521 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
USP35-205ENST00000530521 AMOTL2Q9Y2J4 779 aa13.42□□□□□ -0.26
USP35-205ENST00000530521 RXRBP28702 533 aa13.41□□□□□ -0.26
USP35-205ENST00000530521 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
USP35-205ENST00000530521 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
USP35-205ENST00000530521 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
USP35-205ENST00000530521 ANKRD50Q9ULJ7 1429 aa13.4□□□□□ -0.26
USP35-205ENST00000530521 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
USP35-205ENST00000530521 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
USP35-205ENST00000530521 DDX17Q92841 729 aaKnown RBP13.4□□□□□ -0.26
USP35-205ENST00000530521 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP35-205ENST00000530521 E9PCH4 1651 aa13.39□□□□□ -0.27
USP35-205ENST00000530521 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
USP35-205ENST00000530521 ADGRL2O95490 1459 aa13.38□□□□□ -0.27
USP35-205ENST00000530521 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
USP35-205ENST00000530521 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
USP35-205ENST00000530521 AFF2P51816 1311 aa13.37□□□□□ -0.27
USP35-205ENST00000530521 ITGAEP38570 1179 aa13.36□□□□□ -0.27
USP35-205ENST00000530521 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
USP35-205ENST00000530521 AHDC1Q5TGY3 1603 aaPredicted RBP13.35□□□□□ -0.27
USP35-205ENST00000530521 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
USP35-205ENST00000530521 DIP2AQ14689 1571 aa13.34□□□□□ -0.27
USP35-205ENST00000530521 C8orf37Q96NL8 207 aa13.34□□□□□ -0.27
USP35-205ENST00000530521 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
USP35-205ENST00000530521 TRPM2O94759 1503 aa13.31□□□□□ -0.28
USP35-205ENST00000530521 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
USP35-205ENST00000530521 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
USP35-205ENST00000530521 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
USP35-205ENST00000530521 UNC13BO14795 1591 aa13.31□□□□□ -0.28
USP35-205ENST00000530521 NUP155O75694 1391 aa13.31□□□□□ -0.28
USP35-205ENST00000530521 METP08581 1390 aa13.31□□□□□ -0.28
USP35-205ENST00000530521 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
USP35-205ENST00000530521 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
USP35-205ENST00000530521 NRXN3Q9Y4C0 1643 aa13.29□□□□□ -0.28
USP35-205ENST00000530521 MST1RQ04912 1400 aa13.29□□□□□ -0.28
USP35-205ENST00000530521 NHSL1Q5SYE7 1610 aa13.28□□□□□ -0.28
USP35-205ENST00000530521 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
USP35-205ENST00000530521 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
USP35-205ENST00000530521 IQGAP3Q86VI3 1631 aa13.28□□□□□ -0.28
USP35-205ENST00000530521 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
USP35-205ENST00000530521 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
USP35-205ENST00000530521 RGS12O14924 1447 aa13.26□□□□□ -0.29
USP35-205ENST00000530521 PNPLA6Q8IY17 1366 aa13.26□□□□□ -0.29
USP35-205ENST00000530521 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
USP35-205ENST00000530521 NALCNQ8IZF0 1738 aa13.25□□□□□ -0.29
USP35-205ENST00000530521 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
USP35-205ENST00000530521 SPHKAPQ2M3C7 1700 aa13.24□□□□□ -0.29
USP35-205ENST00000530521 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
USP35-205ENST00000530521 DCCP43146 1447 aa13.22□□□□□ -0.29
USP35-205ENST00000530521 USP21Q9UK80 565 aa13.22□□□□□ -0.29
USP35-205ENST00000530521 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
USP35-205ENST00000530521 ROCK1Q13464 1354 aa13.21□□□□□ -0.29
USP35-205ENST00000530521 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
USP35-205ENST00000530521 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
USP35-205ENST00000530521 KIF1BO60333 1816 aa13.19□□□□□ -0.3
USP35-205ENST00000530521 CLTCL1P53675 1640 aa13.19□□□□□ -0.3
USP35-205ENST00000530521 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
USP35-205ENST00000530521 ROBO2Q9HCK4 1378 aa13.18□□□□□ -0.3
USP35-205ENST00000530521 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
USP35-205ENST00000530521 SOS2Q07890 1332 aaPredicted RBP13.17□□□□□ -0.3
USP35-205ENST00000530521 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
USP35-205ENST00000530521 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
USP35-205ENST00000530521 FNBP4Q8N3X1 1017 aaPredicted RBP13.16□□□□□ -0.3
USP35-205ENST00000530521 ESCO1Q5FWF5 840 aa13.15□□□□□ -0.3
USP35-205ENST00000530521 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
USP35-205ENST00000530521 EP400Q96L91 3159 aa13.15□□□□□ -0.3
USP35-205ENST00000530521 FOXO3O43524 673 aa13.14□□□□□ -0.31
USP35-205ENST00000530521 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
USP35-205ENST00000530521 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
USP35-205ENST00000530521 LAMC1P11047 1609 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms