RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-209ENST00000530468 HDGFP51858 240 aaKnown RBP24■■□□□ 1.43
TM9SF1-209ENST00000530468 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
TM9SF1-209ENST00000530468 PROSER2Q86WR7 435 aaPredicted RBP23.99■■□□□ 1.43
TM9SF1-209ENST00000530468 ZFYVE9O95405 1425 aa23.99■■□□□ 1.43
TM9SF1-209ENST00000530468 GCC2Q8IWJ2 1684 aa23.99■■□□□ 1.43
TM9SF1-209ENST00000530468 BCANQ96GW7 911 aa23.98■■□□□ 1.43
TM9SF1-209ENST00000530468 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
TM9SF1-209ENST00000530468 RIMS2Q9UQ26 1411 aa23.96■■□□□ 1.43
TM9SF1-209ENST00000530468 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
TM9SF1-209ENST00000530468 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
TM9SF1-209ENST00000530468 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.92■■□□□ 1.42
TM9SF1-209ENST00000530468 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
TM9SF1-209ENST00000530468 MSH6P52701 1360 aa23.91■■□□□ 1.42
TM9SF1-209ENST00000530468 E9PCH4 1651 aa23.9■■□□□ 1.42
TM9SF1-209ENST00000530468 MYO5BQ9ULV0 1848 aa23.89■■□□□ 1.42
TM9SF1-209ENST00000530468 RBM33Q96EV2 1170 aaKnown RBP23.89■■□□□ 1.41
TM9SF1-209ENST00000530468 TBX22Q9Y458 520 aa23.89■■□□□ 1.41
TM9SF1-209ENST00000530468 CHGAP10645 457 aaKnown RBP23.88■■□□□ 1.41
TM9SF1-209ENST00000530468 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
TM9SF1-209ENST00000530468 NUP155O75694 1391 aa23.87■■□□□ 1.41
TM9SF1-209ENST00000530468 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
TM9SF1-209ENST00000530468 CHD2O14647 1828 aaKnown RBP23.85■■□□□ 1.41
TM9SF1-209ENST00000530468 DIP2AQ14689 1571 aa23.84■■□□□ 1.41
TM9SF1-209ENST00000530468 ITGAEP38570 1179 aa23.83■■□□□ 1.41
TM9SF1-209ENST00000530468 PIK3R4Q99570 1358 aa23.82■■□□□ 1.4
TM9SF1-209ENST00000530468 SLAIN2Q9P270 581 aa23.82■■□□□ 1.4
TM9SF1-209ENST00000530468 ADAMTS13Q76LX8 1427 aa23.82■■□□□ 1.4
TM9SF1-209ENST00000530468 RGS17Q9UGC6 210 aaPredicted RBP23.8■■□□□ 1.4
TM9SF1-209ENST00000530468 NUTM2DQ5VT03 806 aaPredicted RBP23.78■■□□□ 1.4
TM9SF1-209ENST00000530468 TRPM2O94759 1503 aa23.75■■□□□ 1.39
TM9SF1-209ENST00000530468 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
TM9SF1-209ENST00000530468 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
TM9SF1-209ENST00000530468 PHLPP1O60346 1717 aa23.73■■□□□ 1.39
TM9SF1-209ENST00000530468 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
TM9SF1-209ENST00000530468 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
TM9SF1-209ENST00000530468 JCADQ9P266 1359 aa23.73■■□□□ 1.39
TM9SF1-209ENST00000530468 SPHKAPQ2M3C7 1700 aa23.7■■□□□ 1.39
TM9SF1-209ENST00000530468 ATF3P18847 181 aa23.7■■□□□ 1.38
TM9SF1-209ENST00000530468 AMOTL2Q9Y2J4 779 aa23.7■■□□□ 1.38
TM9SF1-209ENST00000530468 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
TM9SF1-209ENST00000530468 PTPRUQ92729 1446 aa23.68■■□□□ 1.38
TM9SF1-209ENST00000530468 RRBP1Q9P2E9 1410 aaKnown RBP23.68■■□□□ 1.38
TM9SF1-209ENST00000530468 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
TM9SF1-209ENST00000530468 COL16A1Q07092 1604 aaPredicted RBP23.67■■□□□ 1.38
TM9SF1-209ENST00000530468 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
TM9SF1-209ENST00000530468 POTEAQ6S8J7 498 aa23.66■■□□□ 1.38
TM9SF1-209ENST00000530468 DCCP43146 1447 aa23.65■■□□□ 1.38
TM9SF1-209ENST00000530468 AHDC1Q5TGY3 1603 aaPredicted RBP23.64■■□□□ 1.38
TM9SF1-209ENST00000530468 NRXN3Q9Y4C0 1643 aa23.64■■□□□ 1.38
TM9SF1-209ENST00000530468 SPATA31A6Q5VVP1 1343 aa23.62■■□□□ 1.37
TM9SF1-209ENST00000530468 XRN1Q8IZH2 1706 aaKnown RBP23.62■■□□□ 1.37
TM9SF1-209ENST00000530468 NAIPQ13075 1403 aa23.62■■□□□ 1.37
TM9SF1-209ENST00000530468 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
TM9SF1-209ENST00000530468 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
TM9SF1-209ENST00000530468 METP08581 1390 aa23.58■■□□□ 1.37
TM9SF1-209ENST00000530468 BRINP3Q76B58 766 aa23.58■■□□□ 1.37
TM9SF1-209ENST00000530468 SHPRHQ149N8 1683 aa23.55■■□□□ 1.36
TM9SF1-209ENST00000530468 LRP6O75581 1613 aa23.55■■□□□ 1.36
TM9SF1-209ENST00000530468 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
TM9SF1-209ENST00000530468 MST1RQ04912 1400 aa23.53■■□□□ 1.36
TM9SF1-209ENST00000530468 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
TM9SF1-209ENST00000530468 ASXL1Q8IXJ9 1541 aa23.53■■□□□ 1.36
TM9SF1-209ENST00000530468 KIF1BO60333 1816 aa23.52■■□□□ 1.36
TM9SF1-209ENST00000530468 ADGRL3Q9HAR2 1447 aa23.52■■□□□ 1.36
TM9SF1-209ENST00000530468 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
TM9SF1-209ENST00000530468 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
TM9SF1-209ENST00000530468 ZNF772Q68DY9 489 aaPredicted RBP23.5■■□□□ 1.35
TM9SF1-209ENST00000530468 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
TM9SF1-209ENST00000530468 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
TM9SF1-209ENST00000530468 SLC4A1APQ9BWU0 796 aaKnown RBP23.47■■□□□ 1.35
TM9SF1-209ENST00000530468 PTCH1Q13635 1447 aa23.46■■□□□ 1.35
TM9SF1-209ENST00000530468 NHSL1Q5SYE7 1610 aa23.46■■□□□ 1.35
TM9SF1-209ENST00000530468 LRRC59Q96AG4 307 aaKnown RBP23.44■■□□□ 1.34
TM9SF1-209ENST00000530468 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
TM9SF1-209ENST00000530468 PRAG1Q86YV5 1406 aa23.42■■□□□ 1.34
TM9SF1-209ENST00000530468 NUTM2BA6NNL0 878 aaPredicted RBP23.41■■□□□ 1.34
TM9SF1-209ENST00000530468 NUTM2EB1AL46 878 aaPredicted RBP23.41■■□□□ 1.34
TM9SF1-209ENST00000530468 NUTM2AQ8IVF1 878 aaPredicted RBP23.41■■□□□ 1.34
TM9SF1-209ENST00000530468 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
TM9SF1-209ENST00000530468 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
TM9SF1-209ENST00000530468 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
TM9SF1-209ENST00000530468 PNPLA6Q8IY17 1366 aa23.37■■□□□ 1.33
TM9SF1-209ENST00000530468 RXRBP28702 533 aa23.36■■□□□ 1.33
TM9SF1-209ENST00000530468 PPLO60437 1756 aa23.36■■□□□ 1.33
TM9SF1-209ENST00000530468 DDX17Q92841 729 aaKnown RBP23.35■■□□□ 1.33
TM9SF1-209ENST00000530468 AFF2P51816 1311 aa23.34■■□□□ 1.33
TM9SF1-209ENST00000530468 CDK12Q9NYV4 1490 aaPredicted RBP23.34■■□□□ 1.33
TM9SF1-209ENST00000530468 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.33
TM9SF1-209ENST00000530468 LAMC1P11047 1609 aa23.33■■□□□ 1.33
TM9SF1-209ENST00000530468 FOXD1Q16676 465 aa23.3■■□□□ 1.32
TM9SF1-209ENST00000530468 SOS2Q07890 1332 aaPredicted RBP23.3■■□□□ 1.32
TM9SF1-209ENST00000530468 C8orf37Q96NL8 207 aa23.29■■□□□ 1.32
TM9SF1-209ENST00000530468 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
TM9SF1-209ENST00000530468 UPF1Q92900 1129 aaKnown RBP eCLIP23.28■■□□□ 1.32
TM9SF1-209ENST00000530468 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
TM9SF1-209ENST00000530468 SPATA31E1Q6ZUB1 1445 aa23.27■■□□□ 1.32
TM9SF1-209ENST00000530468 ADGRF5Q8IZF2 1346 aa23.27■■□□□ 1.32
TM9SF1-209ENST00000530468 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
TM9SF1-209ENST00000530468 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
TM9SF1-209ENST00000530468 RGL3Q3MIN7 710 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms