RNA–Protein interactions for RNA: ENST00000530294.5

PPFIA1-213, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 5

Gene PPFIA1, Length 977 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-213ENST00000530294 SLC26A8Q96RN1 970 aa14.03□□□□□ -0.16
PPFIA1-213ENST00000530294 PHLPP1O60346 1717 aa14.02□□□□□ -0.16
PPFIA1-213ENST00000530294 E9PCH4 1651 aa14.02□□□□□ -0.16
PPFIA1-213ENST00000530294 COL16A1Q07092 1604 aaPredicted RBP14.02□□□□□ -0.16
PPFIA1-213ENST00000530294 UNC13BO14795 1591 aa14.02□□□□□ -0.16
PPFIA1-213ENST00000530294 PLEKHG1Q9ULL1 1385 aa14.01□□□□□ -0.17
PPFIA1-213ENST00000530294 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
PPFIA1-213ENST00000530294 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
PPFIA1-213ENST00000530294 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
PPFIA1-213ENST00000530294 NCOA3Q9Y6Q9 1424 aa14□□□□□ -0.17
PPFIA1-213ENST00000530294 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
PPFIA1-213ENST00000530294 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.99□□□□□ -0.17
PPFIA1-213ENST00000530294 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
PPFIA1-213ENST00000530294 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
PPFIA1-213ENST00000530294 ADAMTS13Q76LX8 1427 aa13.98□□□□□ -0.17
PPFIA1-213ENST00000530294 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
PPFIA1-213ENST00000530294 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
PPFIA1-213ENST00000530294 RIMS2Q9UQ26 1411 aa13.97□□□□□ -0.17
PPFIA1-213ENST00000530294 IQGAP3Q86VI3 1631 aa13.97□□□□□ -0.17
PPFIA1-213ENST00000530294 SETD1AO15047 1707 aaKnown RBP13.96□□□□□ -0.17
PPFIA1-213ENST00000530294 SHPRHQ149N8 1683 aa13.96□□□□□ -0.17
PPFIA1-213ENST00000530294 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
PPFIA1-213ENST00000530294 MSH6P52701 1360 aa13.96□□□□□ -0.18
PPFIA1-213ENST00000530294 AHDC1Q5TGY3 1603 aaPredicted RBP13.95□□□□□ -0.18
PPFIA1-213ENST00000530294 PIK3R4Q99570 1358 aa13.95□□□□□ -0.18
PPFIA1-213ENST00000530294 JCADQ9P266 1359 aa13.94□□□□□ -0.18
PPFIA1-213ENST00000530294 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
PPFIA1-213ENST00000530294 APLP2Q06481 763 aa13.93□□□□□ -0.18
PPFIA1-213ENST00000530294 LRP6O75581 1613 aa13.93□□□□□ -0.18
PPFIA1-213ENST00000530294 XRN1Q8IZH2 1706 aaKnown RBP13.92□□□□□ -0.18
PPFIA1-213ENST00000530294 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
PPFIA1-213ENST00000530294 PTPRUQ92729 1446 aa13.9□□□□□ -0.18
PPFIA1-213ENST00000530294 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
PPFIA1-213ENST00000530294 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.89□□□□□ -0.19
PPFIA1-213ENST00000530294 C19orf44Q9H6X5 657 aa13.89□□□□□ -0.19
PPFIA1-213ENST00000530294 NHSL1Q5SYE7 1610 aa13.89□□□□□ -0.19
PPFIA1-213ENST00000530294 SPHKAPQ2M3C7 1700 aa13.88□□□□□ -0.19
PPFIA1-213ENST00000530294 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
PPFIA1-213ENST00000530294 SETBP1Q9Y6X0 1596 aa13.88□□□□□ -0.19
PPFIA1-213ENST00000530294 TRPM2O94759 1503 aa13.87□□□□□ -0.19
PPFIA1-213ENST00000530294 FAM50AQ14320 339 aaKnown RBP13.86□□□□□ -0.19
PPFIA1-213ENST00000530294 DCCP43146 1447 aa13.86□□□□□ -0.19
PPFIA1-213ENST00000530294 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
PPFIA1-213ENST00000530294 LAMC1P11047 1609 aa13.84□□□□□ -0.19
PPFIA1-213ENST00000530294 SETD5Q9C0A6 1442 aa13.83□□□□□ -0.2
PPFIA1-213ENST00000530294 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
PPFIA1-213ENST00000530294 BCANQ96GW7 911 aa13.83□□□□□ -0.2
PPFIA1-213ENST00000530294 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.2
PPFIA1-213ENST00000530294 CDK12Q9NYV4 1490 aaPredicted RBP13.82□□□□□ -0.2
PPFIA1-213ENST00000530294 PPP1R15AO75807 674 aaPredicted RBP13.82□□□□□ -0.2
PPFIA1-213ENST00000530294 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
PPFIA1-213ENST00000530294 MST1RQ04912 1400 aa13.81□□□□□ -0.2
PPFIA1-213ENST00000530294 NALCNQ8IZF0 1738 aa13.81□□□□□ -0.2
PPFIA1-213ENST00000530294 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
PPFIA1-213ENST00000530294 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
PPFIA1-213ENST00000530294 ZNF772Q68DY9 489 aaPredicted RBP13.8□□□□□ -0.2
PPFIA1-213ENST00000530294 KIF1BO60333 1816 aa13.8□□□□□ -0.2
PPFIA1-213ENST00000530294 NUP155O75694 1391 aa13.8□□□□□ -0.2
PPFIA1-213ENST00000530294 NEXMIFQ5QGS0 1516 aa13.8□□□□□ -0.2
PPFIA1-213ENST00000530294 ATF3P18847 181 aa13.79□□□□□ -0.2
PPFIA1-213ENST00000530294 METP08581 1390 aa13.79□□□□□ -0.2
PPFIA1-213ENST00000530294 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
PPFIA1-213ENST00000530294 CHGAP10645 457 aaKnown RBP13.77□□□□□ -0.21
PPFIA1-213ENST00000530294 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.21
PPFIA1-213ENST00000530294 ADGRL3Q9HAR2 1447 aa13.76□□□□□ -0.21
PPFIA1-213ENST00000530294 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
PPFIA1-213ENST00000530294 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
PPFIA1-213ENST00000530294 RXRBP28702 533 aa13.72□□□□□ -0.21
PPFIA1-213ENST00000530294 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
PPFIA1-213ENST00000530294 PPLO60437 1756 aa13.72□□□□□ -0.21
PPFIA1-213ENST00000530294 SRCAPQ6ZRS2 3230 aa13.72□□□□□ -0.21
PPFIA1-213ENST00000530294 AFF2P51816 1311 aa13.71□□□□□ -0.21
PPFIA1-213ENST00000530294 COL22A1Q8NFW1 1626 aaPredicted RBP13.71□□□□□ -0.22
PPFIA1-213ENST00000530294 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
PPFIA1-213ENST00000530294 C1orf167Q5SNV9 1468 aa13.7□□□□□ -0.22
PPFIA1-213ENST00000530294 TRIM52Q96A61 297 aa13.7□□□□□ -0.22
PPFIA1-213ENST00000530294 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
PPFIA1-213ENST00000530294 EP400Q96L91 3159 aa13.7□□□□□ -0.22
PPFIA1-213ENST00000530294 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
PPFIA1-213ENST00000530294 MEX3CQ5U5Q3 659 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-213ENST00000530294 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-213ENST00000530294 RGS12O14924 1447 aa13.69□□□□□ -0.22
PPFIA1-213ENST00000530294 NAIPQ13075 1403 aa13.68□□□□□ -0.22
PPFIA1-213ENST00000530294 RRBP1Q9P2E9 1410 aaKnown RBP13.67□□□□□ -0.22
PPFIA1-213ENST00000530294 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-213ENST00000530294 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-213ENST00000530294 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-213ENST00000530294 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
PPFIA1-213ENST00000530294 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
PPFIA1-213ENST00000530294 IFT172Q9UG01 1749 aa13.65□□□□□ -0.22
PPFIA1-213ENST00000530294 QTRT2Q9H974 415 aaKnown RBP13.65□□□□□ -0.22
PPFIA1-213ENST00000530294 ZNF326Q5BKZ1 582 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-213ENST00000530294 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-213ENST00000530294 ORAI2Q96SN7 254 aa13.63□□□□□ -0.23
PPFIA1-213ENST00000530294 VGFO15240 615 aaPredicted RBP13.62□□□□□ -0.23
PPFIA1-213ENST00000530294 ITGAEP38570 1179 aa13.62□□□□□ -0.23
PPFIA1-213ENST00000530294 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
PPFIA1-213ENST00000530294 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
PPFIA1-213ENST00000530294 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
PPFIA1-213ENST00000530294 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms