RNA–Protein interactions for RNA: ENST00000530090.1

NCAM1-211, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 2

Gene NCAM1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-211ENST00000530090 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
NCAM1-211ENST00000530090 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
NCAM1-211ENST00000530090 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
NCAM1-211ENST00000530090 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
NCAM1-211ENST00000530090 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
NCAM1-211ENST00000530090 GFRA3O60609 400 aa11.51□□□□□ -0.57
NCAM1-211ENST00000530090 RNF40O75150 1001 aa11.51□□□□□ -0.57
NCAM1-211ENST00000530090 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
NCAM1-211ENST00000530090 CEP164Q9UPV0 1460 aa11.51□□□□□ -0.57
NCAM1-211ENST00000530090 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
NCAM1-211ENST00000530090 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
NCAM1-211ENST00000530090 CCDC88BA6NC98 1476 aa11.5□□□□□ -0.57
NCAM1-211ENST00000530090 APLP1P51693 650 aa11.49□□□□□ -0.57
NCAM1-211ENST00000530090 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
NCAM1-211ENST00000530090 V9GY48 417 aaPredicted RBP11.48□□□□□ -0.57
NCAM1-211ENST00000530090 WDR62O43379 1518 aa11.48□□□□□ -0.57
NCAM1-211ENST00000530090 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
NCAM1-211ENST00000530090 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
NCAM1-211ENST00000530090 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
NCAM1-211ENST00000530090 PADI6Q6TGC4 694 aa11.46□□□□□ -0.57
NCAM1-211ENST00000530090 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.57
NCAM1-211ENST00000530090 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
NCAM1-211ENST00000530090 TRAF7Q6Q0C0 670 aa11.45□□□□□ -0.58
NCAM1-211ENST00000530090 NRG2O14511 850 aaPredicted RBP11.44□□□□□ -0.58
NCAM1-211ENST00000530090 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
NCAM1-211ENST00000530090 LCE2BO14633 110 aa11.42□□□□□ -0.58
NCAM1-211ENST00000530090 GGCXP38435 758 aa11.41□□□□□ -0.58
NCAM1-211ENST00000530090 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
NCAM1-211ENST00000530090 EYA1Q99502 592 aa11.4□□□□□ -0.58
NCAM1-211ENST00000530090 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.59
NCAM1-211ENST00000530090 COPS2P61201 443 aa11.39□□□□□ -0.59
NCAM1-211ENST00000530090 PRR14Q9BWN1 585 aa11.39□□□□□ -0.59
NCAM1-211ENST00000530090 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
NCAM1-211ENST00000530090 PRDM2Q13029 1718 aa11.37□□□□□ -0.59
NCAM1-211ENST00000530090 ZPR1O75312 459 aa11.35□□□□□ -0.59
NCAM1-211ENST00000530090 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
NCAM1-211ENST00000530090 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
NCAM1-211ENST00000530090 PDZRN3Q9UPQ7 1066 aa11.34□□□□□ -0.59
NCAM1-211ENST00000530090 PCDHB3Q9Y5E6 796 aa11.33□□□□□ -0.6
NCAM1-211ENST00000530090 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
NCAM1-211ENST00000530090 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
NCAM1-211ENST00000530090 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
NCAM1-211ENST00000530090 DNAJB2P25686 324 aa11.31□□□□□ -0.6
NCAM1-211ENST00000530090 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
NCAM1-211ENST00000530090 PTGDRQ13258 359 aa11.3□□□□□ -0.6
NCAM1-211ENST00000530090 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
NCAM1-211ENST00000530090 IFT140Q96RY7 1462 aa11.29□□□□□ -0.6
NCAM1-211ENST00000530090 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
NCAM1-211ENST00000530090 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
NCAM1-211ENST00000530090 DNMBPQ6XZF7 1577 aa11.27□□□□□ -0.61
NCAM1-211ENST00000530090 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
NCAM1-211ENST00000530090 ADGRG1Q9Y653 693 aa11.26□□□□□ -0.61
NCAM1-211ENST00000530090 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
NCAM1-211ENST00000530090 SLC19A1P41440 591 aa11.24□□□□□ -0.61
NCAM1-211ENST00000530090 KMT5BQ4FZB7 885 aa11.24□□□□□ -0.61
NCAM1-211ENST00000530090 ACTN4O43707 911 aaKnown RBP11.23□□□□□ -0.61
NCAM1-211ENST00000530090 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
NCAM1-211ENST00000530090 ZNF608Q9ULD9 1512 aaPredicted RBP11.23□□□□□ -0.61
NCAM1-211ENST00000530090 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
NCAM1-211ENST00000530090 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
NCAM1-211ENST00000530090 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
NCAM1-211ENST00000530090 TLL1O43897 1013 aa11.21□□□□□ -0.61
NCAM1-211ENST00000530090 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
NCAM1-211ENST00000530090 TRIM67Q6ZTA4 783 aa11.2□□□□□ -0.62
NCAM1-211ENST00000530090 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
NCAM1-211ENST00000530090 CFHP08603 1231 aa11.19□□□□□ -0.62
NCAM1-211ENST00000530090 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
NCAM1-211ENST00000530090 SOGA1O94964 1423 aa11.18□□□□□ -0.62
NCAM1-211ENST00000530090 FCHSD2O94868 740 aa11.18□□□□□ -0.62
NCAM1-211ENST00000530090 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
NCAM1-211ENST00000530090 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
NCAM1-211ENST00000530090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
NCAM1-211ENST00000530090 FAM161AQ3B820 660 aa11.17□□□□□ -0.62
NCAM1-211ENST00000530090 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
NCAM1-211ENST00000530090 NR1I2O75469 434 aa11.16□□□□□ -0.62
NCAM1-211ENST00000530090 S1PR4O95977 384 aa11.16□□□□□ -0.62
NCAM1-211ENST00000530090 AQRO60306 1485 aaKnown RBP eCLIP11.16□□□□□ -0.62
NCAM1-211ENST00000530090 CUX1P39880 1505 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 ADH1BP00325 375 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 PRR20EP86478 221 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 PRR20CP86479 221 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 PRR20DP86480 221 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 PRR20BP86481 221 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 PRR20AP86496 221 aa11.15□□□□□ -0.62
NCAM1-211ENST00000530090 EIF4G3O43432 1585 aaKnown RBP11.15□□□□□ -0.62
NCAM1-211ENST00000530090 FGD5Q6ZNL6 1462 aa11.14□□□□□ -0.63
NCAM1-211ENST00000530090 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
NCAM1-211ENST00000530090 DGAT1O75907 488 aa11.14□□□□□ -0.63
NCAM1-211ENST00000530090 SLC10A3P09131 477 aa11.14□□□□□ -0.63
NCAM1-211ENST00000530090 PKDCCQ504Y2 493 aa11.14□□□□□ -0.63
NCAM1-211ENST00000530090 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
NCAM1-211ENST00000530090 OATP04181 439 aa11.13□□□□□ -0.63
NCAM1-211ENST00000530090 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
NCAM1-211ENST00000530090 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
NCAM1-211ENST00000530090 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
NCAM1-211ENST00000530090 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
NCAM1-211ENST00000530090 WDR97A6NE52 1622 aa11.1□□□□□ -0.63
NCAM1-211ENST00000530090 MYT1Q01538 1121 aa11.1□□□□□ -0.63
NCAM1-211ENST00000530090 RSPH4AQ5TD94 716 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms