RNA–Protein interactions for RNA: ENST00000530090.1

NCAM1-211, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 2

Gene NCAM1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-211ENST00000530090 AEBP2Q6ZN18 517 aaPredicted RBP29.85■■■□□ 2.37
NCAM1-211ENST00000530090 CHIC1Q5VXU3 224 aa28.27■■■□□ 2.12
NCAM1-211ENST00000530090 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
NCAM1-211ENST00000530090 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
NCAM1-211ENST00000530090 FOXD1Q16676 465 aa23.78■■□□□ 1.4
NCAM1-211ENST00000530090 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
NCAM1-211ENST00000530090 MSH5O43196 834 aa22.36■■□□□ 1.17
NCAM1-211ENST00000530090 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
NCAM1-211ENST00000530090 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
NCAM1-211ENST00000530090 ADRA2BP18089 450 aa22.05■■□□□ 1.12
NCAM1-211ENST00000530090 POTEDQ86YR6 584 aa21.97■■□□□ 1.11
NCAM1-211ENST00000530090 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
NCAM1-211ENST00000530090 SCAF1Q9H7N4 1312 aaKnown RBP20.26■□□□□ 0.83
NCAM1-211ENST00000530090 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
NCAM1-211ENST00000530090 PPP4R3CPQ6ZMV5 832 aa19.73■□□□□ 0.75
NCAM1-211ENST00000530090 HOXD11P31277 338 aaPredicted RBP19.44■□□□□ 0.7
NCAM1-211ENST00000530090 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
NCAM1-211ENST00000530090 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
NCAM1-211ENST00000530090 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
NCAM1-211ENST00000530090 CACNB1Q02641 598 aaPredicted RBP19.22■□□□□ 0.67
NCAM1-211ENST00000530090 RNF39Q9H2S5 420 aa19.04■□□□□ 0.64
NCAM1-211ENST00000530090 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
NCAM1-211ENST00000530090 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
NCAM1-211ENST00000530090 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
NCAM1-211ENST00000530090 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
NCAM1-211ENST00000530090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.52■□□□□ 0.56
NCAM1-211ENST00000530090 KCNA4P22459 653 aa18.18■□□□□ 0.5
NCAM1-211ENST00000530090 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
NCAM1-211ENST00000530090 CAPN15O75808 1086 aa17.86■□□□□ 0.45
NCAM1-211ENST00000530090 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
NCAM1-211ENST00000530090 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
NCAM1-211ENST00000530090 DSG3P32926 999 aa17.78■□□□□ 0.44
NCAM1-211ENST00000530090 APLP2Q06481 763 aa17.66■□□□□ 0.42
NCAM1-211ENST00000530090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
NCAM1-211ENST00000530090 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
NCAM1-211ENST00000530090 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
NCAM1-211ENST00000530090 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
NCAM1-211ENST00000530090 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
NCAM1-211ENST00000530090 ABCB7O75027 752 aa17.41■□□□□ 0.38
NCAM1-211ENST00000530090 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
NCAM1-211ENST00000530090 POTEHQ6S545 545 aa17.2■□□□□ 0.34
NCAM1-211ENST00000530090 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
NCAM1-211ENST00000530090 POLA2Q14181 598 aa17.04■□□□□ 0.32
NCAM1-211ENST00000530090 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
NCAM1-211ENST00000530090 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
NCAM1-211ENST00000530090 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
NCAM1-211ENST00000530090 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
NCAM1-211ENST00000530090 ZBTB22O15209 634 aa16.7■□□□□ 0.26
NCAM1-211ENST00000530090 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
NCAM1-211ENST00000530090 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
NCAM1-211ENST00000530090 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
NCAM1-211ENST00000530090 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
NCAM1-211ENST00000530090 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
NCAM1-211ENST00000530090 FBLN2P98095 1184 aa16.27■□□□□ 0.2
NCAM1-211ENST00000530090 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
NCAM1-211ENST00000530090 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
NCAM1-211ENST00000530090 SPDYE2BA6NHP3 402 aa16.2■□□□□ 0.18
NCAM1-211ENST00000530090 SPDYE6P0CI01 402 aa16.2■□□□□ 0.18
NCAM1-211ENST00000530090 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
NCAM1-211ENST00000530090 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
NCAM1-211ENST00000530090 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
NCAM1-211ENST00000530090 SP7Q8TDD2 431 aaPredicted RBP16.08■□□□□ 0.16
NCAM1-211ENST00000530090 HAX1O00165 279 aa15.96■□□□□ 0.15
NCAM1-211ENST00000530090 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
NCAM1-211ENST00000530090 SPDYE1Q8NFV5 336 aaPredicted RBP15.95■□□□□ 0.14
NCAM1-211ENST00000530090 SSUH2Q9Y2M2 353 aa15.95■□□□□ 0.14
NCAM1-211ENST00000530090 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
NCAM1-211ENST00000530090 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
NCAM1-211ENST00000530090 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
NCAM1-211ENST00000530090 EVX2Q03828 476 aa15.71■□□□□ 0.11
NCAM1-211ENST00000530090 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
NCAM1-211ENST00000530090 PRR29P0C7W0 189 aa15.62■□□□□ 0.09
NCAM1-211ENST00000530090 C19orf67A6NJJ6 358 aa15.61■□□□□ 0.09
NCAM1-211ENST00000530090 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
NCAM1-211ENST00000530090 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
NCAM1-211ENST00000530090 NISCHQ9Y2I1 1504 aa15.44■□□□□ 0.06
NCAM1-211ENST00000530090 GABBR2O75899 941 aa15.39■□□□□ 0.05
NCAM1-211ENST00000530090 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
NCAM1-211ENST00000530090 STAG3Q9UJ98 1225 aa15.31■□□□□ 0.04
NCAM1-211ENST00000530090 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
NCAM1-211ENST00000530090 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
NCAM1-211ENST00000530090 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
NCAM1-211ENST00000530090 CLCN6P51797 869 aa15.19■□□□□ 0.02
NCAM1-211ENST00000530090 LHX8Q68G74 356 aa15.08■□□□□ 0
NCAM1-211ENST00000530090 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0
NCAM1-211ENST00000530090 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
NCAM1-211ENST00000530090 POTEIP0CG38 1075 aa15.04■□□□□ -0
NCAM1-211ENST00000530090 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
NCAM1-211ENST00000530090 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
NCAM1-211ENST00000530090 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
NCAM1-211ENST00000530090 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
NCAM1-211ENST00000530090 PROM2Q8N271 834 aa14.91□□□□□ -0.02
NCAM1-211ENST00000530090 GALR2O43603 387 aaPredicted RBP14.87□□□□□ -0.03
NCAM1-211ENST00000530090 PHF12Q96QT6 1004 aa14.83□□□□□ -0.04
NCAM1-211ENST00000530090 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
NCAM1-211ENST00000530090 MS4A3Q96HJ5 214 aa14.63□□□□□ -0.07
NCAM1-211ENST00000530090 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
NCAM1-211ENST00000530090 MIER1Q8N108 512 aa14.6□□□□□ -0.07
NCAM1-211ENST00000530090 CCDC61Q9Y6R9 512 aa14.59□□□□□ -0.07
NCAM1-211ENST00000530090 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms